Monoisotopic Mass Determination Algorithm for Selenocysteine-Containing Polypeptides from Mass Spectrometric Data Based on Theoretical Modeling of Isotopic Peak Intensity Ratios

Jin Wook Kim; Sunho Lee; Kunsoo Park; Seungjin Na; Eunok Paek; Hyung Seo Park; Heejin Park; Kong-Joo Lee; Jaeho Jeong; Hwa-Young Kim

doi:10.1021/pr300232y

Monoisotopic Mass Determination Algorithm for Selenocysteine-Containing Polypeptides from Mass Spectrometric Data Based on Theoretical Modeling of Isotopic Peak Intensity Ratios

Journal of Proteome Research ◽

10.1021/pr300232y ◽

2012 ◽

Vol 11 (9) ◽

pp. 4488-4498 ◽

Cited By ~ 4

Author(s):

Jin Wook Kim ◽

Sunho Lee ◽

Kunsoo Park ◽

Seungjin Na ◽

Eunok Paek ◽

...

Keyword(s):

Theoretical Modeling ◽

Mass Spectrometric ◽

Mass Determination ◽

Isotopic Peak ◽

Mass Spectrometric Data ◽

Spectrometric Data ◽

Monoisotopic Mass ◽

Peak Intensity ◽

Intensity Ratios

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Isotopic Peak Intensity Ratio Based Algorithm for Determination of Isotopic Clusters and Monoisotopic Masses of Polypeptides from High-Resolution Mass Spectrometric Data

Analytical Chemistry ◽

10.1021/ac800913b ◽

2008 ◽

Vol 80 (19) ◽

pp. 7294-7303 ◽

Cited By ~ 25

Author(s):

Kunsoo Park ◽

Joo Young Yoon ◽

Sunho Lee ◽

Eunok Paek ◽

Heejin Park ◽

...

Keyword(s):

High Resolution ◽

Intensity Ratio ◽

Mass Spectrometric ◽

Isotopic Peak ◽

Peak Intensity Ratio ◽

Mass Spectrometric Data ◽

Spectrometric Data ◽

Peak Intensity ◽

Resolution Mass

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Determination of monoisotopic masses of chimera spectra from high-resolution mass spectrometric data by use of isotopic peak intensity ratio modeling

Rapid Communications in Mass Spectrometry ◽

10.1002/rcm.6293 ◽

2012 ◽

Vol 26 (16) ◽

pp. 1875-1886 ◽

Cited By ~ 9

Author(s):

Ming Niu ◽

Xinli Mao ◽

Wantao Ying ◽

Weijie Qin ◽

Yangjun Zhang ◽

...

Keyword(s):

High Resolution ◽

Intensity Ratio ◽

Mass Spectrometric ◽

Isotopic Peak ◽

Peak Intensity Ratio ◽

Mass Spectrometric Data ◽

Spectrometric Data ◽

Peak Intensity ◽

Resolution Mass

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Postexperiment Monoisotopic Mass Filtering and Refinement (PE-MMR) of Tandem Mass Spectrometric Data Increases Accuracy of Peptide Identification in LC/MS/MS

Molecular & Cellular Proteomics ◽

10.1074/mcp.m700419-mcp200 ◽

2008 ◽

Vol 7 (6) ◽

pp. 1124-1134 ◽

Cited By ~ 40

Author(s):

Byunghee Shin ◽

Hee-Jung Jung ◽

Seok-Won Hyung ◽

Hokeun Kim ◽

Dongkyu Lee ◽

...

Keyword(s):

Peptide Identification ◽

Mass Spectrometric ◽

Tandem Mass ◽

Mass Spectrometric Data ◽

Spectrometric Data ◽

Monoisotopic Mass ◽

Tandem Mass Spectrometric

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Integrated Post-Experiment Monoisotopic Mass Refinement: An Integrated Approach to Accurately Assign Monoisotopic Precursor Masses to Tandem Mass Spectrometric Data

Analytical Chemistry ◽

10.1021/ac101388b ◽

2010 ◽

Vol 82 (20) ◽

pp. 8510-8518 ◽

Cited By ~ 15

Author(s):

Hee-Jung Jung ◽

Samuel O. Purvine ◽

Hokeun Kim ◽

Vladislav A. Petyuk ◽

Seok-Won Hyung ◽

...

Keyword(s):

Integrated Approach ◽

Mass Spectrometric ◽

Tandem Mass ◽

Mass Spectrometric Data ◽

Spectrometric Data ◽

Monoisotopic Mass ◽

Tandem Mass Spectrometric

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Application of Factor Analysis in Imaging Mass Spectrometric Data Analysis

Chinese Journal of Analytical Chemistry ◽

10.1016/s1872-2040(14)60757-x ◽

2014 ◽

Vol 42 (8) ◽

pp. 1099-1103 ◽

Cited By ~ 6

Author(s):

Yi CHEN ◽

Fei TANG ◽

Tie-Gang LI ◽

Jiu-Ming HE ◽

Zeper ABLIZ ◽

...

Keyword(s):

Factor Analysis ◽

Data Analysis ◽

Mass Spectrometric ◽

Mass Spectrometric Data ◽

Spectrometric Data

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MS2DB: A Mass-Based Hashing Algorithm for the Identification of Disulfide Linkage Patterns in Protein Utilizing Mass Spectrometric Data

Twentieth IEEE International Symposium on Computer-Based Medical Systems (CBMS'07) ◽

10.1109/cbms.2007.72 ◽

2007 ◽

Author(s):

Timothy Lee ◽

Rahul Singh ◽

Ten-Yang Yen ◽

Bruce Macher

Keyword(s):

Mass Spectrometric ◽

Disulfide Linkage ◽

Mass Spectrometric Data ◽

Spectrometric Data ◽

Hashing Algorithm

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Quantitation and Mass Spectrometric Data for Drugs and Isotopically Labeled Analogs

Journal of the American Society for Mass Spectrometry ◽

10.1007/s13361-010-0062-z ◽

2011 ◽

Vol 22 (4) ◽

pp. 795-795

Author(s):

Michael L. Gross

Keyword(s):

Mass Spectrometric ◽

Mass Spectrometric Data ◽

Spectrometric Data

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Two-dimensional LC-MS fractioning and cross-matching of mass spectrometric data for rational identification of bioactive compounds in crude extracts

Journal of Separation Science ◽

10.1002/jssc.201100468 ◽

2011 ◽

Vol 34 (23) ◽

pp. 3359-3363 ◽

Cited By ~ 1

Author(s):

Geir Klinkenberg ◽

Håvard Sletta ◽

Espen Fjaervik ◽

Kolbjørn Zahlsen ◽

Per Bruheim

Keyword(s):

Bioactive Compounds ◽

Mass Spectrometric ◽

Two Dimensional ◽

Mass Spectrometric Data ◽

Spectrometric Data ◽

Crude Extracts ◽

Cross Matching

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Deconvolution and spectral clean-up of two-component mixtures by factor analysis of gas chromatographic–mass spectrometric data

The Analyst ◽

10.1039/an9962100993 ◽

1996 ◽

Vol 121 (8) ◽

pp. 993-1001 ◽

Cited By ~ 12

Author(s):

Peter Hindmarch ◽

Cevdet Demir ◽

Richard G. Brereton

Keyword(s):

Factor Analysis ◽

Mass Spectrometric ◽

Mass Spectrometric Data ◽

Spectrometric Data ◽

Two Component ◽

Chromatographic Mass

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Dynamic Cluster Analysis: An Unbiased Method for Identifying A + 2 Element Containing Compounds in Liquid Chromatographic High-Resolution Time-of-Flight Mass Spectrometric Data

Analytical Chemistry ◽

10.1021/acs.analchem.6b03902 ◽

2016 ◽

Vol 88 (24) ◽

pp. 12461-12469 ◽

Cited By ~ 9

Author(s):

Aaron John Christian Andersen ◽

Per Juel Hansen ◽

Kevin Jørgensen ◽

Kristian Fog Nielsen

Keyword(s):

Cluster Analysis ◽

High Resolution ◽

Time Of Flight ◽

Mass Spectrometric ◽

Resolution Time ◽

Mass Spectrometric Data ◽

Spectrometric Data ◽

Dynamic Cluster ◽

Liquid Chromatographic

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