Biological Activities and 3D QSAR Studies of a Series ofDeliseapulchra(cf.fimbriata) Derived Natural Products

2006 ◽  
Vol 69 (8) ◽  
pp. 1180-1187 ◽  
Author(s):  
Anthony D. Wright ◽  
Rocky de Nys ◽  
Cindy K. Angerhofer ◽  
John M. Pezzuto ◽  
Marion Gurrath
2020 ◽  
Vol 29 (3) ◽  
pp. 495-503 ◽  
Author(s):  
Jingbo Liu ◽  
Fengyun Li ◽  
Yuanhong Wang ◽  
Haoxuan Zhang ◽  
Yuxin Li ◽  
...  

2011 ◽  
Vol 361-363 ◽  
pp. 263-267 ◽  
Author(s):  
Ming Liu ◽  
Wen Xiang Hu ◽  
Xiao Li Liu

A predictive 3D-QSAR model which correlates the biological activities with the chemical structures of a series of 4-phenylpiperidine derivatives as μ opioid agonists was developed by means of comparative molecular field analysis (CoMFA). The stabilities of the 3D-QSAR models were verified by the leave-one-out cross-validation method. Moreover, the predictive capabilities of the models were validated by an external test set. Best predictions were obtained with CoMFA standard model(q2=0.504, N=6, r2=0.968) which revealed how steric and electrostatic interactions contribute to agonists bioactivities, and provided us with important information to understand the interaction of agonists and μ opioid receptor .


2011 ◽  
Vol 8 (4) ◽  
pp. 1596-1605
Author(s):  
Mohan Babu Jatavath ◽  
Sree Kanth Sivan ◽  
Yamini Lingala ◽  
Vijjulatha Manga

The p38 signaling cascade has emerged as an attractive target for the design of novel chemotherapeutic agents for the treatment of inflammatory diseases. Three dimensional quantitative structure- activity relationship (3D- QSAR) studies were performed on a series of 25, 2-aminothiazole analogs as inhibitors of p38α mitogen activated protein (MAP) kinase. The docking results provided a reliable conformational alignment scheme for the 3D-QSAR model. The 3D-QSAR model showed very good statistical results namely q2, r2and r2predvalues for both comparative molecular field analysis (CoMFA) and comparative molecular similarity indices analysis (CoMSIA). The CoMFA and CoMSIA models & docking results provided the most significant correlation of steric, electrostatic, hydrophobic,H-bond donor,H-bond acceptor fields with biological activities and the provided values were in good agreement with the experimental results. The information rendered from molecular modeling studies gave valuable clues to optimize the lead and design new potential inhibitors.


Molecules ◽  
2018 ◽  
Vol 23 (11) ◽  
pp. 3036 ◽  
Author(s):  
Chaozai Zhang ◽  
Huijun Zhang ◽  
Lina S. Huang ◽  
Siyu Zhu ◽  
Yan Xu ◽  
...  

Human immunodeficiency virus type 1 (HIV-1) is responsible for the majority of HIV infections worldwide, and we still lack a cure for this infection. Blocking the interaction of HIV-1 and its primary receptor CD4 is one strategy for identifying new anti-HIV-1 entry inhibitors. Here we report the discovery of a novel ligand that can inhibit HIV-1 entry and infection via CD4. Biological and computational analyses of this inhibitor and its analogs, using bioactivity evaluation, Rule of Five (RO5), comparative molecular field analysis (CoMFA)/comparative molecular similarity index analysis (CoMSIA) models, and three-dimensional quantitative structure-activity relationship (3D-QSAR), singled out compound 3 as a promising lead molecule for the further development of therapeutics targeting HIV-1 entry. Our study demonstrates an effective approach for employing structure-based, rational drug design techniques to identify novel antiviral compounds with interesting biological activities.


2019 ◽  
Vol 30 (3) ◽  
pp. 668-671 ◽  
Author(s):  
Jingbo Liu ◽  
Fengyun Li ◽  
Yuanhong Wang ◽  
Haoxuan Zhang ◽  
Jingyue Dong ◽  
...  

2019 ◽  
Vol 2019 ◽  
pp. 1-12
Author(s):  
Flávio R. Nóbrega ◽  
Larisse V. Silva ◽  
Carlos da Silva M. Bezerra Filho ◽  
Tamires C. Lima ◽  
Yunierkis P. Castillo ◽  
...  

Piplartine is an alkamide found in different Piper species and possesses several biological activities, including antiparasitic properties. Thus, the aim of the present study was to evaluate a series of 32 synthetic piplartine analogues against the Leishmania amazonensis promastigote forms and establish the structure-activity relationship and 3D-QSAR of these compounds. The antileishmanial effect of the compounds was determined using the MTT method. Most compounds were found to be active against L. amazonensis. Among 32 assayed derivatives, compound (E)-(−)-bornyl 3-(3,4,5-trimethoxyphenyl)-acrylate exhibited the most potent antileishmanial activity (IC50 = 0.007 ± 0.008 μM, SI > 10), followed by benzyl 3,4,5-trimethoxybenzoate (IC50 = 0.025 ± 0.009 μM, SI > 3.205) and (E)-furfuryl 3-(3,4,5-trimethoxyphenyl)-acrylate (IC50 = 0.029 ± 0.007 μM, SI > 2.688). It was found that the rigid substituents contribute to increasing antiparasitic activity against L. amazonensis promastigotes. The presence of the unsaturated heterocyclic substituent in the phenylpropanoid chemical structure (furfuryl group) resulted in a bioactive derivative. Molecular simplification of benzyl 3,4,5-trimethoxybenzoate by omitting the spacer group contributed to the bioactivity of this compound. Furthermore, bornyl radical appears to be important for antileishmanial activity, since (E)-(−)-bornyl 3-(3,4,5-trimethoxyphenyl)-acrylate exhibited the most potent antileishmanial activity. These results show that some derivatives studied would be useful as prototype molecules for the planning of new derivatives with profile of antileishmanial drugs.


2021 ◽  
Author(s):  
Li-Hui Shao ◽  
Si-Li Fan ◽  
Ying-Fen Meng ◽  
Yi-Yuan Gan ◽  
Wu-Bin Shao ◽  
...  

A series of novel quinazolinone derivatives containing hydrazone structural units were synthesized and their antitumour activities were evaluated.


2012 ◽  
Vol 29 (5) ◽  
pp. 438-443
Author(s):  
Hai-bin LUO ◽  
Guo-wen CHEN ◽  
Yong-xian SHAO ◽  
Zhe LI ◽  
Ming LIU ◽  
...  

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