Computed and Experimental Chemical Shift Parameters for Rigid and Flexible YAF Peptides in the Solid State

2012 ◽  
Vol 116 (6) ◽  
pp. 1974-1983 ◽  
Author(s):  
Tomasz Pawlak ◽  
Katarzyna Trzeciak-Karlikowska ◽  
Jiri Czernek ◽  
Wlodzimierz Ciesielski ◽  
Marek J. Potrzebowski
2003 ◽  
Vol 58 (1) ◽  
pp. 51-56 ◽  
Author(s):  
◽  
J. D. D’Souza ◽  
B. H. Arun Kumar

In an effort to introduce N-chloroarylsulphonamides of different oxydising strengths, sixteen sodium salts of N-chloro-mono- and di-substituted benzenesulphonamides of the configuration, 4- X-C6H4SO2NaNCl (where X = H; CH3; C2H5; F; Cl; Br; I or NO2) and i-X, j-YC6H3SO2NaNCl (where i-X, j-Y = 2,3-(CH3)2; 2,4-(CH3)2; 2,5-(CH3)2; 2-CH3,4-Cl; 2-CH3,5-Cl; 3-CH3,4-Cl; 2,4- Cl2 or 3,4-Cl2) are prepared, characterized through their infrared spectra in the solid state and NMR spectra in solution. The υN-Cl frequencies vary in the range 950 - 927 cm−1. Effects of substitution in the benzene ring in terms of electron donating and electron withdrawing groups have been considered, and conclusions drawn. The chemical shifts of aromatic protons and carbon-13 in all the N-chloroarylsulphonamides have been calculated by adding substituent contributions to the shift of benzene. Considering the approximation employed the agreement between the calculated and experimental chemical shift values for different protons or carbon-13 is quite good. Effects of phenyl ring substitution on chemical shift values of both 1H and 13C are also graphically represented in terms of line diagrams.


2002 ◽  
Vol 57 (12) ◽  
pp. 967-973 ◽  
Author(s):  
B. Thimme Gowda ◽  
K. Jyothi ◽  
J. D. D’Souza

Several arylsulphonamides of the configuration, 4-X-C6H4SO2NH2 (where X= H; CH3; C2H5;F; Cl; Br; I or NO2) and i-X, j-YC6H3SO2NH2 (where i-X, j-Y=2,3-(CH3)2; 2,4-(CH3)2; 2,5-(CH3)2;2-CH3,4-Cl; 2-CH3,5-Cl; 3-CH3,4-Cl; 2,4-Cl2 or 3,4-Cl2) were prepared, and their infrared spectra were measured in the solid state. The NMR spectra were recorded in solution. N-H asymmetric and symmetric stretching vibrations absorb in the ranges, 3390 - 3323 cm-1 and 3279 - 3229 cm-1,respectively. Asymmetric and symmetric SO2 stretching vibrations appear as strong absorption lines in the ranges, 1344 - 1317 cm-1 and 1187 - 1147 cm-1, respectively. Sulphonamides exhibit S-N stretching vibrational absorptions in the range, 924 - 906 cm-1. The effect of substitution inthe phenyl ring in terms of electron withdrawing and electron donating groups could not be generalised, as the effect is non-systematic. The chemical shift is highly dependent on the electron density around the nucleus or associated with the atom to which it is bonded. Hence empiricalcorrelations relating the chemical shifts to the structures have been discussed. The chemical shifts of aromatic protons and carbons in all the arylsulphonamides have been calculated by adding substituent contributions to the shift of benzene, the principle of substituent addition. Considering the approximation made, the agreement between the calculated and experimental chemical shift values is reasonably good. Generally, electron-withdrawing groups shows high chemicalshifts compared to electron-donating groups.


2019 ◽  
Vol 150 (14) ◽  
pp. 144706 ◽  
Author(s):  
Ivan Yu. Chernyshov ◽  
Mikhail V. Vener ◽  
Ilya G. Shenderovich

2015 ◽  
Vol 93 (4) ◽  
pp. 451-458 ◽  
Author(s):  
Xianqi Kong ◽  
Aaron Tang ◽  
Ruiyao Wang ◽  
Eric Ye ◽  
Victor Terskikh ◽  
...  

We report synthesis of 17O-labeling and solid-state 17O NMR measurements of three N-acyl imidazoles of the type R-C(17O)-Im: R = p-methoxycinnamoyl (MCA-Im), R = 4-(dimethylamino)benzoyl (DAB-Im), and R = 2,4,6-trimethylbenzoyl (TMB-Im). Solid-state 17O NMR experiments allowed us to determine for the first time the 17O quadrupole coupling and chemical shift tensors in this class of organic compounds. We also determined the crystal structures of these compounds using single-crystal X-ray diffraction. The crystal structures show that, while the C(O)–N amide bond in DAB-Im exhibits a small twist, those in MCA-Im and TMB-Im are essentially planar. We found that, in these N-acyl imidazoles, the 17O quadrupole coupling and chemical shift tensors depend critically on the torsion angle between the conjugated acyl group and the C(O)–N amide plane. The computational results from a plane-wave DFT approach, which takes into consideration the entire crystal lattice, are in excellent agreement with the experimental solid-state 17O NMR results. Quantum chemical computations also show that the dependence of 17O NMR parameters on the Ar–C(O) bond rotation is very similar to that previously observed for the C(O)–N bond rotation in twisted amides. We conclude that one should be cautious in linking the observed NMR chemical shifts only to the twist of the C(O)–N amide bond.


2021 ◽  
Author(s):  
Alexander A. Malär ◽  
Laura A. Völker ◽  
Riccardo Cadalbert ◽  
Lauriane Lecoq ◽  
Matthias Ernst ◽  
...  

Temperature-dependent NMR experiments are often complicated by rather long magnetic-field equilibration times, for example occurring upon a change of sample temperature. We demonstrate that the fast temporal stabilization of the magnetic field can be achieved by actively stabilizing the temperature which allows to quantify the weak temperature dependence of the proton chemical shift which can be diagnostic for the presence of hydrogen bonds. Hydrogen bonding plays a central role in molecular recognition events from both fields, chemistry and biology. Their direct detection by standard structure determination techniques, such as X-ray crystallography or cryo-electron microscopy, remains challenging due to the difficulties of approaching the required resolution, on the order of 1 Å. We herein explore a spectroscopic approach using solid-state NMR to identify protons engaged in hydrogen bonds and explore the measurement of proton chemical-shift temperature coefficients. Using the examples of a phosphorylated amino acid and the protein ubiquitin, we show that fast Magic-Angle Spinning (MAS) experiments at 100 kHz yield sufficient resolution in proton-detected spectra to quantify the rather small chemical-shift changes upon temperature variations.<br>


Author(s):  
Jun Liu ◽  
Da-hai He ◽  
Hua-lin Chen ◽  
Ke-yi Ding

In order to investigate the change of chemical bonds between tanning agents and collagen molecules directly, hide powder tanned by aluminum, silicon and phosphorus tanning agents were prepared. The chemical shifts of Al, Si and P in tanned hide powder were analyzed by solid-state 27Al NMR, 29Si NMR and 31P NMR. The results showed that, the chemical shift of Al in aluminum tanned hide powder which interacted with collagen molecules through coordination bond could be regarded as unchanging after hydrothermal denaturation (only slightly moved to high field area). The chemical shift of Si in silicon tanned hide powder which interacted with collagen molecules through hydrogen bond did not change after hydrothermal denaturation. The chemical shift of P in phosphorus tanned hide powder, which interacted with collagen molecules through covalent bond, was obviously shifted to the high field area after hydrothermal denaturation.


2019 ◽  
Vol 21 (19) ◽  
pp. 10070-10074 ◽  
Author(s):  
Kartik Pilar ◽  
Zeyu Deng ◽  
Molleigh B. Preefer ◽  
Joya A. Cooley ◽  
Raphaële Clément ◽  
...  

The complete 31P NMR chemical shift tensors for 22 inorganic phosphates obtained from ab initio computation are found to correspond closely to experimentally obtained parameters. The cases where correspondence is significantly improved upon geometry optimization point to the crystal structures requiring correction.


2009 ◽  
Vol 87 (1) ◽  
pp. 348-360 ◽  
Author(s):  
Bryan A Demko ◽  
Roderick E Wasylishen

A 31P and 77Se solid-state NMR investigation of the iminobis(diorganophosphine chalcogenide) HN(R2PE)2 (R = Ph,iPr; E = O, S, Se) systems is presented. The NMR results are discussed in terms of the known HN(R2PE)2 structures available from X-ray crystallography. The phosphorus chemical shift tensors are found to be sensitive to the nature of the alkyl and chalcogen substituents. The nature of the R group also influences the selenium chemical shift tensors of HN(R2PSe)2 (R = Ph, iPr), which are shown to be sensitive to hydrogen bonding in the dimer structure of HN(Ph2PSe)2 and to the presence of disorder in the case of HN(iPr2PSe)2. Scalar relativistic ZORA DFT nuclear magnetic shielding tensor calculations were performed yielding the orientations of the corresponding chemical shift tensors. A theoretical investigation into the effect of the E-P···P-E “torsion” angle on the phosphorus and selenium chemical shift tensors of a truncated HN(Me2PSe)2 system indicates that the electronic effect of the alkyl group on the respective nuclear magnetic shielding tensors are more important than the steric effect of the E-P···P-E torsion angle.Key words: iminobis(diorganophosphine chalcogenide), solid-state NMR, 31P NMR, 77Se NMR, ZORA DFT.


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