Covalent attachment of amino acids to casein. 1. Chemical modification and rates of in vitro enzymic hydrolysis of derivatives

1979 ◽  
Vol 27 (5) ◽  
pp. 1098-1104 ◽  
Author(s):  
Antoine J. Puigserver ◽  
Lourminia C. Sen ◽  
Elvira Gonzales-Flores ◽  
Robert E. Feeney ◽  
John R. Whitaker
Keyword(s):  
Amino Acids ◽  
Chemical Modification ◽  
Covalent Attachment ◽  
Enzymic Hydrolysis ◽  
Hydrolysis Of

scholarly journals Anionic amino acids support hydrolysis of poly-β-(1,6)-N-acetylglucosamine exopolysaccharides by the biofilm dispersing glycosidase Dispersin B

2020 ◽  
pp. jbc.RA120.015524
Author(s):  
Alexandra P Breslawec ◽  
Shaochi Wang ◽  
Crystal Li ◽  
Myles B Poulin
Keyword(s):  
Amino Acids ◽  
Bacterial Infections ◽  
Substrate Recognition ◽  
Site Directed Mutagenesis ◽  
Binding Surface ◽  
Activity Measurements ◽  
Rate Of Hydrolysis ◽  
Biofilm Dispersal ◽  
Hydrolysis Of

The exopolysaccharide poly-β-(1→6)-N-acetylglucosamine (PNAG) is a major structural determinant of bacterial biofilms responsible for persistent and nosocomial infections. The enzymatic dispersal of biofilms by PNAG-hydrolyzing glycosidase enzymes, such as Dispersin B (DspB), is a possible approach to treat biofilm dependent bacterial infections. The cationic charge resulting from partial de-N-acetylation of native PNAG is critical for PNAG-dependent biofilm formation. We recently demonstrated that DspB has increased catalytic activity on de-N-acetylated PNAG oligosaccharides, but the molecular basis for this increased activity is not known. Here, we analyze the role of anionic amino acids surrounding the catalytic pocket of DspB in PNAG substrate recognition and hydrolysis using a combination of site directed mutagenesis, activity measurements using synthetic PNAG oligosaccharide analogs, and in vitro biofilm dispersal assays. The results of these studies support a model in which bound PNAG is weakly associated with a shallow anionic groove on the DspB protein surface with recognition driven by interactions with the –1 GlcNAc residue in the catalytic pocket. An increased rate of hydrolysis for cationic PNAG was driven, in part, by interaction with D147 on the anionic surface. Moreover, we identified that a DspB mutant with improved hydrolysis of fully acetylated PNAG oligosaccharides correlates with improved in vitro dispersal of PNAG dependent Staphylococcus epidermidis biofilms. These results provide insight into the mechanism of substrate recognition by DspB and suggest a method to improve DspB biofilm dispersal activity by mutation of the amino acids within the anionic binding surface.

Complete sequence and in vitro expression of a tissue-specific phosphatidylinositol-linked N-CAM isoform from skeletal muscle

Development ◽  
1988 ◽  
Vol 104 (1) ◽  
pp. 165-173 ◽  
Author(s):  
C.H. Barton ◽  
G. Dickson ◽  
H.J. Gower ◽  
L.H. Rowett ◽  
W. Putt ◽  
...  
Keyword(s):  
Skeletal Muscle ◽  
Amino Acids ◽  
Cell Surface ◽  
Protein Sequence ◽  
Single Copy ◽  
In Vitro Transcription ◽  
Full Length ◽  
Covalent Attachment ◽  
Size Difference

Neural cell adhesion molecules (N-CAMs) are a family of cell surface sialoglycoproteins encoded by a single copy gene. A full-length cDNA clone that encodes a nontransmembrane phosphatidylinositol (PI) linked N-CAM of Mr 125 × 10(3) has been isolated from a human skeletal muscle cDNA library. The deduced protein sequence encodes a polypeptide of 761 amino acids and is highly homologous to the N-CAM isoform in brain of Mr 120 × 10(3). The size difference between the 125 × 10(3). The size difference between the 125 × 10(3) Mr skeletal muscle form and the 120 × 10(3) Mr N-CAM form from brain is accounted for by the insertion of a block of 37 amino acids called MSD1, in the extracellular domain of the muscle form. Transient expression of the human cDNA in COS cells results in cell surface N-CAM expression via a putative covalent attachment to PI-containing phospholipid. Linked in vitro transcription and translation experiments followed by immunoprecipitation with anti-N-CAM antibodies demonstrate that the full-length clone of 761 amino acid coding potential produces a core polypeptide of Mr 110 × 10(3) which is processed by microsomal membranes to yield a 122 × 10(3) Mr species. Taken together, these results demonstrate that the cloned cDNA sequence encodes a lipid-linked, PI-specific phospholipase C releasable surface isoform of N-CAM with core glycopeptide molecular weight corresponding to the authentic muscle 125 × 10(3) Mr N-CAM isoform. This is the first direct correlation of cDNA and deduced protein sequence with a known PI-linked N-CAM isoform from skeletal muscle.

Effect of 2,4-D on the Hydrolysis of Diclofop-Methyl in Wild Oat (Avena fatua)

Weed Science ◽  
1980 ◽  
Vol 28 (6) ◽  
pp. 725-729 ◽  
Author(s):  
B. D. Hill ◽  
B. G. Todd ◽  
E. H. Stobbe
Keyword(s):  
Enzyme Preparation ◽  
Avena Fatua ◽  
Wild Oat ◽  
Enzymic Hydrolysis ◽  
Standard Assay ◽  
Rate Of Hydrolysis ◽  
Dichlorophenoxy Acetic Acid ◽  
Hydrolysis Of ◽  
Assay Conditions

The basis for 2,4-D [(2,4-dichlorophenoxy)acetic acid] antagonism of diclofop-methyl {methyl 2-[4-(2,4-dichlorophenoxy) phenoxy] propanoate} toxicity to wild oat (Avena fatuaL.) was investigated by studying changes in the metabolism of diclofop-methyl in vitro. An esterase from wild oat, which hydrolyzes diclofop-methyl to the acid diclofop, was extracted, partially purified, and the reaction characterized. The rate of hydrolysis of14C-diclofop-methyl was 0.14 ηmoles/2 h at standard assay conditions of 0.25 mg lyophilized enzyme preparation (19.6% protein) in 0.1 ml phosphate buffer (0.1 M, pH 7.0), substrate 5 μM. The addition of 2,4-D to this reaction did not inhibit14C-diclofop formation. Higher levels of 2,4-D stimulated enzymic hydrolysis.14C-diclofop-methyl was rapidly metabolized to14C-diclofop and polar14C-conjugates when vacuum-infiltrated into wild oat leaf segments. The addition of 2,4-D caused small increases in the rates of both14C-diclofop-methyl de-esterification and14C-diclofop conjugation. It is concluded that 2,4-D does not inhibit the in vitro de-esterification of diclofop-methyl.

scholarly journals The participation of methionine and cysteine in the formation of bonds resistant to the action of proteolytic enzymes in heated casein

1975 ◽  
Vol 34 (2) ◽  
pp. 163-173 ◽  
Author(s):  
Danuta Pieniaźek ◽  
Maria Rakowska ◽  
Hanna Kunachowicz
Keyword(s):  
Amino Acids ◽  
Leucine Aminopeptidase ◽  
Proteolytic Enzymes ◽  
Cysteic Acid ◽  
Enzymic Hydrolysis ◽  
Rat Growth ◽  
Cysteine Content ◽  
Amino Acid Contents ◽  
Formation Of Complexes

1. The influence of temperature, moisture content and the presence of glucose on the level of available methionine and cysteine in casein was studied.2. Differences between total and available methionine and cysteine contents of heated casein (90° for 24 h) were determined by an in vitro method. The maximum losses in total and available methionine content were 22 and 51% respectively. The losses in total and available cysteine content were 24 and 100% respectively.3. The results indicated that for heated casein the release of amino acids by proteolytic enzymes was less complete than for native casein.4. The results of rat growth assays suggested that diets containing oxidized casein are less well utilized by rats than those containing native casein. The decrease in body-weight of rats receiving the diets containing oxidized casein could be counteracted by the addition of methionine and 20 g unoxidized casein/kg diet.5. There was a lower level of some available amino acids (determined after enzymic hydrolysis using pancreatopeptidase E (EC 3.4.4.7), leucine aminopeptidase (EC 3.4.1.1) and prolidase (EC 3.4.3.7)), including those essential for the rat, in oxidized casein as compared with native casein.6. Cysteic acid, in oxidized casein, probably makes impossible the utilization of the amino acids in its neighbourhood.7. From the differences in the available amino acid contents of the native, oxidized and heated casein it was concluded that the oxidation of casein causes the formation of complexes in the polypeptide chain, resistant to enzymic hydrolysis, but to a much lesser extent than does heating.

Dependence of in vitro Enzymic Hydrolysis of Alkyl(2-benzoyloxyethyl)dimethylammonium Bromides on the Alkyl Length

1998 ◽  
Vol 63 (2) ◽  
pp. 245-251 ◽  
Author(s):  
Eva Olaszová ◽  
Ingrid Paulíková ◽  
Otto Helia ◽  
Emil Švajdlenka ◽  
Ferdinand Devínský ◽  
...  
Keyword(s):  
Benzoic Acid ◽  
Alkyl Chain ◽  
Ammonium Nitrogen ◽  
Acid Formation ◽  
Ester Bond ◽  
Enzymic Hydrolysis ◽  
Kinetics Of ◽  
Hydrolysis Of ◽  
Alkyl Length

Microsomal esterases were used in the study of the in vitro enzymic hydrolysis of the ester bond in alkyl(2-benzoyloxyethyl)dimethylammonium bromides. These compounds are potential "soft" disinfectants, easily biodegradable to nontoxic biologically inactive hydrolytic products, namely substituted choline and benzoic acid. Formation of the latter product was used to monitor the kinetics of the reaction. It has been found that the rate of enzymic hydrolysis is substantially influenced by different length of the alkyl chain on the ammonium nitrogen. At the same time, interspecies (rat-mouse) and interorgan (liver-kidney) variability has been observed.

Enzymic Hydrolysis of Stilbestrol Diphosphate in vitro and in vivo.

1961 ◽  
Vol 106 (2) ◽  
pp. 327-330 ◽  
Author(s):  
W. Johnson ◽  
R. Jasmin ◽  
G. Corte
Keyword(s):  
Enzymic Hydrolysis ◽  
Hydrolysis Of

scholarly journals The sites of hydrolysis of dipeptides containing leucine and glycine by rat jejunum in vitro

1969 ◽  
Vol 114 (4) ◽  
pp. 855-861 ◽  
Author(s):  
E. B. Fern ◽  
R. C. Hider ◽  
D. R. London
Keyword(s):  
Amino Acids ◽  
Amino Acid ◽  
The Other ◽  
Peptidase Activity ◽  
Rat Jejunum ◽  
Effective Inhibitor ◽  
Inhibitory Effects ◽  
Molar Basis ◽  
Hydrolysis Of

1. The effect of peptides containing leucine and glycine on accumulation of leucine and glycine by everted jejunal rings was studied. 2. It was shown that, on a molar basis, leucyl-leucine is a more effective inhibitor of uptake of [14C]leucine than is either leucylglycine or glycyl-leucine. These latter dipeptides behave alike. 3. The concentration of the dipeptides and their constituent amino acids in both the incubation medium and the tissue has been followed in these experiments by amino acid analysis. No leucine-containing peptides were observed in the tissue. 4. The inhibitory effects of the mixed dipeptides are altered by pH changes in an analogous way to the alterations in peptidase activity. 5. The experimental results indicate that leucine-containing peptides are hydrolysed before the transport step. 6. Glycylglycine, on the other hand, has only a small effect on the accumulation of glycine, although large amounts of the peptide accumulate unchanged in the tissue. This suggests that glycylglycine is taken up by a different mechanism to that for the leucine dipeptides.

scholarly journals ywfE in Bacillus subtilis Codes for a Novel Enzyme, l-Amino Acid Ligase

2005 ◽  
Vol 187 (15) ◽  
pp. 5195-5202 ◽  
Author(s):  
Kazuhiko Tabata ◽  
Hajime Ikeda ◽  
Shin-ichi Hashimoto
Keyword(s):  
Amino Acids ◽  
Bacillus Subtilis ◽  
Amino Acid ◽  
High Performance ◽  
Consensus Sequence ◽  
Reaction Products ◽  
In Silico Screening ◽  
Vitro Assay ◽  
Hydrolysis Of

ABSTRACT The ATP-dependent carboxylate-amine/thiol ligase superfamily is known to contain enzymes catalyzing the formation of various types of peptide, such as d-alanyl-d-alanine, polyglutamate, and γ-peptide, but, curiously, no enzyme synthesizing α-dipeptides of l-amino acids is known. We attempted to find such an enzyme. By in silico screening based on the consensus sequence of the superfamily followed by an in vitro assay with purified enzyme to avoid the degradation of the peptide(s) synthesized, ywfE of Bacillus subtilis was found to code for the activity forming l-alanyl-l-glutamine from l-alanine and l-glutamine with hydrolysis of ATP to ADP. No AMP was formed, supporting the idea that the enzyme belongs to the superfamily. Surprisingly, the enzyme accepted a wide variety of l-amino acids. Among 231 combinations of l-amino acids tested, reaction products were obtained for 111 combinations and 44 kinds of α-dipeptides were confirmed by high-performance liquid chromatography analyses, while no tripeptide or longer peptide was detected and the d-amino acids were inert. From these results, we propose that ywfE encodes a new member of the superfamily, l-amino acid ligase.

ChemInform Abstract: Dependence of in vitro Enzymic Hydrolysis of Alkyl(2-benzoyloxyethyl)dimethylammonium Bromides on the Alkyl Length.

ChemInform ◽  
2010 ◽  
Vol 29 (25) ◽  
pp. no-no
Author(s):  
E. OLASZOVA ◽  
I. PAULIKOVA ◽  
O. HELIA ◽  
E. SVAJDLENKA ◽  
F. DEVINSKY ◽  
...  
Keyword(s):  
Enzymic Hydrolysis ◽  
Hydrolysis Of ◽  
Alkyl Length
Sign in / Sign up

Export Citation Format

Share Document