scholarly journals Genomic Organization of a Diverse ACC Synthase Gene Family in Banana and Expression Characteristics of the Gene Member Involved in Ripening of Banana Fruits†

2006 ◽  
Vol 54 (11) ◽  
pp. 3859-3868 ◽  
Author(s):  
Fong-Chin Huang ◽  
Yi-Yin Do ◽  
Pung-Ling Huang
Keyword(s):  
Gene Family ◽  
Genomic Organization ◽  
Acc Synthase ◽  
Expression Characteristics ◽  
Gene Member

scholarly journals Auxin response factor gene family in Brassica rapa: genomic organization, divergence, expression, and evolution

2012 ◽  
Vol 287 (10) ◽  
pp. 765-784 ◽  
Author(s):  
Jeong-Hwan Mun ◽  
Hee-Ju Yu ◽  
Ja Young Shin ◽  
Mijin Oh ◽  
Hyun-Ju Hwang ◽  
...  
Keyword(s):  
Gene Family ◽  
Brassica Rapa ◽  
Genomic Organization ◽  
Auxin Response Factor ◽  
Response Factor ◽  
Auxin Response ◽  
Factor Gene ◽  
Auxin Response Factor Gene

Genomic Organization and Chromosomal Localization of a Member of the MAP Kinase Phosphatase Gene Family to Human Chromosome 11p15.5 and a Pseudogene to 10q11.2

Genomics ◽  
1997 ◽  
Vol 42 (2) ◽  
pp. 284-294 ◽  
Author(s):  
M.A. Nesbit ◽  
M.D. Hodges ◽  
L. Campbell ◽  
T.M.A.M.O. de Meulemeester ◽  
M. Alders ◽  
...  
Keyword(s):  
Human Chromosome ◽  
Gene Family ◽  
Map Kinase ◽  
Genomic Organization ◽  
Chromosomal Localization ◽  
Map Kinase Phosphatase ◽  
Chromosome 11P15.5

scholarly journals SQUAMOSA Promoter Binding Protein-Like (SPL) Gene Family: TRANSCRIPTOME-Wide Identification, Phylogenetic Relationship, Expression Patterns and Network Interaction Analysis in Panax ginseng C. A. Meyer

Plants ◽  
2020 ◽  
Vol 9 (3) ◽  
pp. 354
Author(s):  
Shaokun Li ◽  
Li Li ◽  
Yang Jiang ◽  
Jun Wu ◽  
Honghua Sun ◽  
...  
Keyword(s):  
Gene Family ◽  
Panax Ginseng ◽  
Interaction Analysis ◽  
Binding Protein ◽  
Expression Patterns ◽  
Evolutionary Analysis ◽  
Main Function ◽  
Squamosa Promoter Binding Protein ◽  
Expression Characteristics ◽  
Spl Gene

SPL (SQUAMOSA promoter binding protein-like) gene family is specific transcription factor in the plant that have an important function for plant growth and development. Although the SPL gene family has been widely studied and reported in many various plant species from gymnosperm to angiosperm, there are no systematic studies and reports about the SPL gene family in Panax ginseng C. A. Meyer. In this study, we conducted transcriptome-wide identification, evolutionary analysis, structure analysis, and expression characteristics analysis of SPL gene family in Panax ginseng by bioinformatics. We annotated the PgSPL gene family and found that they might involve in multiple functions including encoding structural proteins, but the main function were still focused on the binding function. The result showed that 106 PgSPL transcripts were classified into two clades - A and B, both of which respectively consisted of three groups. Besides, we profiled PgSPL transcripts’ genotypic, temporal, and spatial expression characteristics. Furthermore, we calculated the correlation of PgSPL transcripts in the 14 tissues of a 4 years old ginseng and 42 farmers’ cultivars farmers’ cultivars of 4 years old ginsengs’ roots with both results showing that SPL transcripts formed a single network, which indicated that PgSPLs inter-coordinated when performing their functions. What’s more, we found that most PgSPL transcripts tended to express in older ginseng instead of younger ginseng, which was not only reflected in the expression of more types of SPL transcripts in older ginseng, but also in the higher expression of SPL transcripts in older ginseng. Additionally, we found that four PgSPL transcripts were only massively expressed in roots. According to PgSPL transcripts’ expression characteristics, we found that PgSPL23-35 and PgSPL24-09 were most proper two transcripts to further study as ginseng age’s molecular marker. These results provide the basis for further elucidation of the PgSPL transcripts’ biological function in ginseng and ginseng genetics improvement and gene breeding in the future.

Genomic organization of the rat aspartyl-tRNA synthetase gene family: A single active gene and several retropseudogenes

Gene ◽  
1996 ◽  
Vol 180 (1-2) ◽  
pp. 197-205 ◽  
Author(s):  
Myriam Lazard ◽  
Fabrice Agou ◽  
Jean Cavarelli ◽  
Marie-Thérèse Latreille ◽  
Dino Moras ◽  
...  
Keyword(s):  
Gene Family ◽  
Genomic Organization ◽  
Trna Synthetase ◽  
Active Gene
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