Anchimeric assistance in radical brominations of bromoalkanes. Bridged transition state. Contradiction of claims by Tanner, et al

1972 ◽  
Vol 94 (18) ◽  
pp. 6550-6552 ◽  
Author(s):  
P. S. Skell ◽  
K. J. Shea
Keyword(s):  
Transition State ◽  
Anchimeric Assistance

Bridgehead Carbocations: Solvolysis of a Series of 5-Substituted Bicycle [3.1.1]heptyl Bromides. Nucleophilic Solvent Assistance to Ionization of 1-Bromobicyclo[3.1.1]heptane

1995 ◽  
Vol 48 (5) ◽  
pp. 967 ◽  
Author(s):  
EW Della ◽  
GM Elsey
Keyword(s):  
Transition State ◽  
Linear Relationship ◽  
Ring Opening ◽  
Deviant Behaviour ◽  
Donor Property ◽  
Methoxy Derivative ◽  
Methoxy Substituent ◽  
Anchimeric Assistance

The synthesis of a range of 5-substituted bicyclo [3.1.1] heptyl bromides for solvolytic studies is described. It is found that the substituent has a profound effect on the rate of solvolysis of the system and acts principally in accordance with the magnitude of its inductive/field constant σI. The most spectacular example of the effect of the substituent is provided by the COOMe group which leads to a retardation in the rate of methanolysis by a factor of 6.5°105. While a linear relationship in the plot of log k and σI is generally obeyed, as expected for a mechanism mediated by the bicyclo [3.1.1] heptyl bridgehead cation, two of the bromides, 1-bromobicyclo[3.1.1] heptane and its 5-methoxy derivative, show deviant behaviour and react more rapidly than predicted on the basis of the Hammett plot. Evidence is presented to show that the enhanced rate of the parent is the result of nucleophilic assistance by the solvent. Anchimeric assistance in the solvolysis of 5-methoxybicyclo[3.1.1] heptyl bromide is attributed to the powerful p-donor property of the methoxy substituent which stabilizes the transition state in a unique concerted ring-opening and ionization step.

Alkaline hydrolysis of glycol esters - A newly suggested criterion in the assessment of anchimeric assistance

1974 ◽  
Vol 27 (11) ◽  
pp. 2325 ◽  
Author(s):  
M Balakrishnan ◽  
Rao G Venkoba ◽  
N Venkatasubramanian
Keyword(s):  
Transition State ◽  
Solvent Effects ◽  
Alkaline Hydrolysis ◽  
Triethylene Glycol ◽  
Binary Solvent ◽  
Solvent Mixtures ◽  
Acetone Water ◽  
Anchimeric Assistance ◽  
Hydrolysis Of ◽  
Suggested Criterion

Solvent effects vis a vis structural effects on the alkaline hydrolysis of various di-and mono-benzoates of glycols have been studied in binary solvent mixtures of dimethyl sulphoxide-water, ethanol-water and acetone-water. It is observed that the higher the stabilization of the transition state by the neighbouring group, the greater is the susceptibility of the reaction to dipolar aprotic solvent acceleration[i.e. k(Me2SO)/k(EtOH) value]. The possibility of employing such solvent effects to evaluate the extent of anchimeric assistance in ester hydrolysis where the neighbouring group can stabilize the transition state is examined. The studies have been extended to triethylene glycol derivatives and it is suggested that dipolar aprotic-protic solvent effects could be used as a kinetic probe for the conformation of the molecule.

scholarly journals Anchimeric Assistance in Hydrogen-Atom Transfer to Bromine

2004 ◽  
Vol 57 (7) ◽  
pp. 651 ◽  
Author(s):  
Anna K. Croft ◽  
Christopher J. Easton
Keyword(s):  
Free Radical ◽  
Hydrogen Atom ◽  
Transition State ◽  
Hydrogen Atom Transfer ◽  
Atom Transfer ◽  
Rate Enhancement ◽  
Anchimeric Assistance ◽  
Electron Donation ◽  
Electron Demand

The free-radical benzylic brominations of series of phenylalanine derivatives and O-phenylalkyl benzoates and N-phenylalkylamides with N-bromosuccinimide exhibit anchimeric assistance by neighbouring ester and amido groups. Rate enhancement occurs through electron donation to the electropositive carbon centre that develops in the transition state of the hydrogen-atom transfer to bromine. The extent of the effect depends on the electron demand at the benzylic position and the electron-donating ability of the neighbouring group.

Memapsin 2, a drug target for Alzheimer's disease

2003 ◽  
Vol 70 ◽  
pp. 213-220 ◽  
Author(s):  
Gerald Koelsch ◽  
Robert T. Turner ◽  
Lin Hong ◽  
Arun K. Ghosh ◽  
Jordan Tang
Keyword(s):  
Crystal Structure ◽  
Alzheimer’S Disease ◽  
Alzheimer's Disease ◽  
Transition State ◽  
Amyloid Precursor Protein ◽  
Therapeutic Target ◽  
Drug Target ◽  
Aspartic Protease ◽  
Precursor Protein ◽  
Memapsin 2

Mempasin 2, a ϐ-secretase, is the membrane-anchored aspartic protease that initiates the cleavage of amyloid precursor protein leading to the production of ϐ-amyloid and the onset of Alzheimer's disease. Thus memapsin 2 is a major therapeutic target for the development of inhibitor drugs for the disease. Many biochemical tools, such as the specificity and crystal structure, have been established and have led to the design of potent and relatively small transition-state inhibitors. Although developing a clinically viable mempasin 2 inhibitor remains challenging, progress to date renders hope that memapsin 2 inhibitors may ultimately be useful for therapeutic reduction of ϐ-amyloid.

Collisional dynamics of Ca1D + HBr reactions: evidence for transition-state motions

1999 ◽  
Vol 97 (8) ◽  
pp. 967-976 ◽  
Author(s):  
M. Garay Salazar, J. M. Orea Rocha, A.
Keyword(s):  
Transition State ◽  
Collisional Dynamics

Reactions of an Aluminium(I) Reagent with 1,2-, 1,3- and 1,5-Dienes: Dearomatisation, Reversibility, and a Pericyclic Mechanism

2019 ◽  
Author(s):  
Clare Bakewell ◽  
Martí Garçon ◽  
Richard Y Kong ◽  
Louisa O'Hare ◽  
Andrew J. P. White ◽  
...  
Keyword(s):  
Reaction Mechanism ◽  
Dft Calculations ◽  
Transition State ◽  
Reaction Pathways ◽  
Aromatic Rings ◽  
Aromatic Character ◽  
Pericyclic Reaction

The reactions of an aluminium(I) reagent with a series of 1,2-, 1,3- and 1,5-dienes are reported. In the case of 1,3-dienes the reaction occurs by a pericyclic reaction mechanism, specifically a cheletropic cycloaddition, to form aluminocyclopentene containing products. This mechanism has been interrogated by stereochemical experiments and DFT calculations. The stereochemical experiments show that the (4+1) cycloaddition follows a suprafacial topology, while calculations support a concerted albeit asynchronous pathway in which the transition state demonstrates aromatic character. Remarkably, the substrate scope of the (4+1) cycloaddition includes dienes that are either in part, or entirely, contained within aromatic rings. In these cases, reactions occur with dearomatisation of the substrate and can be reversible. In the case of 1,2- or 1,5-dienes complementary reactivity is observed; the orthogonal nature of the C=C π-bonds (1,2-diene) and the homoconjugated system (1,5-diene) both disfavour a (4+1) cycloaddition. Rather, reaction pathways are determined by an initial (2+1) cycloaddition to form an aluminocyclopropane intermediate which can in turn undergo insertion of a further C=C π-bond leading to complex organometallic products that incorporate fused hydrocarbon rings.

Active Learning Accelerates Ab Initio Molecular Dynamics on Pericyclic Reactive Energy Surfaces

2020 ◽  
Author(s):  
Shi Jun Ang ◽  
Wujie Wang ◽  
Daniel Schwalbe-Koda ◽  
Simon Axelrod ◽  
Rafael Gomez-Bombarelli
Keyword(s):  
Molecular Dynamics ◽  
Potential Energy ◽  
Transition State ◽  
Potential Energy Surface ◽  
Ab Initio ◽  
Energy Surface ◽  
Computational Cost ◽  
Reactive Trajectories ◽  
Dynamics Simulations ◽  
Energy Surfaces

<div>Modeling dynamical effects in chemical reactions, such as post-transition state bifurcation, requires <i>ab initio</i> molecular dynamics simulations due to the breakdown of simpler static models like transition state theory. However, these simulations tend to be restricted to lower-accuracy electronic structure methods and scarce sampling because of their high computational cost. Here, we report the use of statistical learning to accelerate reactive molecular dynamics simulations by combining high-throughput ab initio calculations, graph-convolution interatomic potentials and active learning. This pipeline was demonstrated on an ambimodal trispericyclic reaction involving 8,8-dicyanoheptafulvene and 6,6-dimethylfulvene. With a dataset size of approximately</div><div>31,000 M062X/def2-SVP quantum mechanical calculations, the computational cost of exploring the reactive potential energy surface was reduced by an order of magnitude. Thousands of virtually costless picosecond-long reactive trajectories suggest that post-transition state bifurcation plays a minor role for the reaction in vacuum. Furthermore, a transfer-learning strategy effectively upgraded the potential energy surface to higher</div><div>levels of theory ((SMD-)M06-2X/def2-TZVPD in vacuum and three other solvents, as well as the more accurate DLPNO-DSD-PBEP86 D3BJ/def2-TZVPD) using about 10% additional calculations for each surface. Since the larger basis set and the dynamic correlation capture intramolecular non-covalent interactions more accurately, they uncover longer lifetimes for the charge-separated intermediate on the more accurate potential energy surfaces. The character of the intermediate switches from entropic to thermodynamic upon including implicit solvation effects, with lifetimes increasing with solvent polarity. Analysis of 2,000 reactive trajectories on the chloroform PES shows a qualitative agreement with the experimentally-reported periselectivity for this reaction. This overall approach is broadly applicable and opens a door to the study of dynamical effects in larger, previously-intractable reactive systems.</div>

An Alternate Energy-Conserved Pathway for the Morita-Baylis-Hillman (MBH) Reaction

2020 ◽  
Author(s):  
Veejendra Yadav
Keyword(s):  
Proton Transfer ◽  
Transition State ◽  
Lower Energy ◽  
Aldol Reaction ◽  
Membered Ring ◽  
Ammonium Ion ◽  
Alternate Energy ◽  
Ring Transition State ◽  
Mbh Reaction

An new overall lower energy pathway for the amine-catalysed Morita-Baylis-Hillman reaction is proposed from computations at the M06-2X/6-311++G(d,p) level. The pathway involves proton-transfer from the ammonium ion to the alkoxide formed from the aldol reaction through a seven-membered ring transition state (TS) structure followed by highly exothermic Hofmann<i> </i>elimination through a five-membered ring TS structure to form the product and also release the catalyst to carry on with the process all over again.

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