Organic photochemistry in the solid state. The distance and geometric requirements for intramolecular hydrogen abstraction reactions. Structure-reactivity relationships based on x-ray crystallographic data

1978 ◽  
Vol 100 (7) ◽  
pp. 2163-2173 ◽  
Author(s):  
John R. Scheffer ◽  
Alice A. Dzakpasu
Keyword(s):  
Solid State ◽  
Hydrogen Abstraction ◽  
Crystallographic Data ◽  
X Ray ◽  
Organic Photochemistry ◽  
Intramolecular Hydrogen

scholarly journals Thermal solid-state Z/E isomerization of 2-alkylidene-4-oxothiazolidines: Effects of non-covalent interactions

2011 ◽  
Vol 76 (3) ◽  
pp. 317-328 ◽  
Author(s):  
Zdravko Dzambaski ◽  
Milovan Stojanovic ◽  
Marija Baranac-Stojanovic ◽  
Dragica Minic ◽  
Rade Markovic
Keyword(s):  
Solid State ◽  
1H Nmr Spectroscopy ◽  
Amorphous State ◽  
Intramolecular Hydrogen Bonding ◽  
Scanning Calorimetry ◽  
X Ray ◽  
Configurational Isomerization ◽  
Non Covalent Interactions ◽  
Intramolecular Hydrogen ◽  
Covalent Interactions

Configurational isomerization of stereo-defined 5-substituted and unsubstituted 2-alkylidene-4-oxothiazolidines 1 in the solid state, giving the Z/E mixtures in various ratios, was investigated by 1H-NMR spectroscopy, X-ray powder crystallography and differential scanning calorimetry (DSC). The Z/E composition can be rationalized in terms of non-covalent interactions, involving intermolecular and intramolecular hydrogen bonding and directional non-bonded 1,5-type S...O interactions. X-Ray powder crystallography, using selected crystalline (Z)-4- oxothiazolidine substrates, revealed transformation to the amorphous state during the irreversible Z ? E process. A correlation between previous results on the Z/E isomerization in solution and now in the solid state was established.

A tale of hydrogen abstraction, initially detectedviaX-ray diffraction

2014 ◽  
Vol 70 (3) ◽  
pp. 250-255 ◽  
Author(s):  
Alice K. Hui ◽  
Chun-Hsing Chen ◽  
Adam M. Terwilliger ◽  
Richard L. Lord ◽  
Kenneth G. Caulton
Keyword(s):  
Solid State ◽  
Density Functional ◽  
Computational Study ◽  
Hydrogen Abstraction ◽  
Open Shell ◽  
X Ray Diffraction ◽  
Neutral Radical ◽  
X Ray ◽  
Chloride Ligand ◽  
Synthetic Reaction

Reaction of a bis-tetrazinyl pyridine pincer ligand, btzp, with a vanadium(III) reagent gives not a simple adduct but dichlorido{3-methyl-6-[6-(6-methyl-1,2,4,5-tetrazin-3-yl-κN2)pyridin-2-yl-κN]-1,4-dihydro-1,2,4,5-tetrazin-1-yl-κN1}oxidovanadium(IV) acetonitrile 2.5-solvate, [V(C11H10N9)Cl2O]·2.5CH3CN, a species which X-ray diffraction reveals to have one H atom added to one of the two tetrazinyl rings. This H atom was first revealed by a short intermolecular N...Cl contact in the unit cell and subsequently established, from difference maps, to be associated with a hydrogen bond. One chloride ligand has also been replaced by an oxide ligand in this synthetic reaction. This formula for the complex, [V(Hbtzp)Cl2O], leaves open the question of both ligand oxidation state and spin state. A computational study of all isomeric locations of the H atom shows the similarity of their energies, which is subject to perturbation by intermolecular hydrogen bonding found in X-ray work on the solid state. These density functional calculations reveal that the isomer with the H atom located as found in the solid state contains a neutral radical Hbtzp ligand and tetravalentd1V center, but that these two unpaired electrons are more stable as an open-shell singlet and hence antiferromagnetically coupled.

scholarly journals Solid-state tautomeric structure and invariom refinement of a novel and potent HIV integrase inhibitor

2013 ◽  
Vol 69 (3) ◽  
pp. 285-288 ◽  
Author(s):  
John Bacsa ◽  
Maurice Okello ◽  
Pankaj Singh ◽  
Vasu Nair
Keyword(s):  
Solid State ◽  
Integrase Inhibitor ◽  
Correlation Spectroscopy ◽  
Hiv Integrase ◽  
Acta Cryst ◽  
X Ray ◽  
X Ray Crystallography ◽  
Molecular Charge ◽  
Intramolecular Hydrogen ◽  
C Nmr

The conformation and tautomeric structure of (Z)-4-[5-(2,6-difluorobenzyl)-1-(2-fluorobenzyl)-2-oxo-1,2-dihydropyridin-3-yl]-4-hydroxy-2-oxo-N-(2-oxopyrrolidin-1-yl)but-3-enamide, C27H22F3N3O5, in the solid state has been resolved by single-crystal X-ray crystallography. The electron distribution in the molecule was evaluated by refinements with invarioms, aspherical scattering factors by the method of Dittrichet al.[Acta Cryst.(2005), A61, 314–320] that are based on the Hansen–Coppens multipole model [Hansen & Coppens (1978).Acta Cryst.A34, 909–921]. The β-diketo portion of the molecule exists in the enol form. The enol –OH hydrogen forms a strong asymmetric hydrogen bond with the carbonyl O atom on the β-C atom of the chain. Weak intramolecular hydrogen bonds exist between the weakly acidic α-CH hydrogen of the keto–enol group and the pyridinone carbonyl O atom, and also between the hydrazine N—H group and the carbonyl group in the β-position from the hydrazine N—H group. The electrostatic properties of the molecule were derived from the molecular charge density. The molecule is in a lengthened conformation and the rings of the two benzyl groups are nearly orthogonal. Results from a high-field1H and13C NMR correlation spectroscopy study confirm that the same tautomer exists in solution as in the solid state.

Properties of Olean-12-ene-3α,16β,22α,28-tetrol and Some Derivatives

1996 ◽  
Vol 49 (7) ◽  
pp. 775 ◽  
Author(s):  
TW Hambley ◽  
TW Hambley ◽  
KG Lewis ◽  
KG Lewis ◽  
DJ Tucker ◽  
...  
Keyword(s):  
Hydrogen Bonding ◽  
Intramolecular Hydrogen Bonding ◽  
Crystallographic Data ◽  
Monoclinic Space Group ◽  
Orthorhombic Space Group ◽  
Ortho Ester ◽  
Polar Solvents ◽  
Space Group ◽  
X Ray ◽  
Intramolecular Hydrogen

Reaction of olean-12-ene-3β,16β,22α,28-tetrol ( chichipegenin ) (1) with methyl orthoformate gives the 16β,22α,28-orthoformate (2). Acetylation of the ortho ester followed by hydrolysis gives the tetrol 3β-monoacetate (5). It is shown that intramolecular hydrogen bonding occurs in the tetrol (1) and the 3β-monoacetate (5) in non-polar solvents. X-Ray crystallographic data on the tetrol and its tetraacetate (4) are reported. The tetrol,C30H50O4, M 474.72, crystallized in the orthorhombic space group P 212121 with a 12.363(6), b 31.888(3), c 6.962(3) Ǻ, V 2745(1) Ǻ3, Dc(Z = 4) 1.149 g cm-3, N = N(unique) 2394, No 1878 [I > 1.5σ(I)], Nvar 500; R 0.038, Rw 0.040. The tetraacetate , C38H58O8, M 642.87, crystallized in the monoclinic space group P 21, with a 10.603(2), b 16.569(1), c 10.814(1) Ǻ, β 98.72(1)°, V 1877.9(4) Ǻ3, Dc(Z = 2) 1.137g cm-3 N 3090, Rmerge 4.67% for N(unique) 2917, No 2663 [I > 2.5σ(I)], Nvar 414; R 0.053, Rw 0.050.

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