Kinetics of Reversible Carbon Deprotonation of 2-Nitroethanol and 2-Nitro-1,3-propanediol by Hydroxide Ion, Water, Amines, and Carboxylate Ions. A Normal Broensted .alpha. Despite an Imbalanced Transition State

1995 ◽  
Vol 117 (36) ◽  
pp. 9206-9212 ◽  
Author(s):  
Claude F. Bernasconi ◽  
Markandeswar Panda ◽  
Michael W. Stronach
Keyword(s):  
Transition State ◽  
Hydroxide Ion ◽  
Kinetics Of

Kinetics of the Imidazolium Ring-Opening of mRNA 5'-cap Analogs in Aqueous Alkali

2006 ◽  
Vol 71 (4) ◽  
pp. 567-578 ◽  
Author(s):  
Alicja Stachelska ◽  
Zbigniew J. Wieczorek ◽  
Janusz Stępiński ◽  
Marzena Jankowska-Anyszka ◽  
Harri Lönnberg ◽  
...  
Keyword(s):  
Electrostatic Interaction ◽  
Ring Opening ◽  
Nucleophilic Attack ◽  
Amino Groups ◽  
Hydroxide Ion ◽  
Methyl Group ◽  
Structural Modifications ◽  
Alkyl Groups ◽  
Imidazolium Ring ◽  
Kinetics Of

Second-order rate constants for the hydroxide-ion-catalyzed imidazolium ring-opening of several mono- and dinucleosidic analogs of mRNA 5'-cap have been determined. Intramolecular stacking of the two nucleobases in the dinucleosidic analogs, m7GpppN (m7G = 7-methylguanosine, N = 5'-linked nucleoside), and electrostatic interaction between the N-alkylated imidazolium ring and phosphate moiety have been shown to shield the m7G moiety against the nucleophilic attack of hydroxide ion. In addition, the effect of methylation of the nucleobase amino groups and replacement of the 7-methyl group with other alkyl groups have been studied. The influence of all the structural modifications studied turned out to be modest, the cleavage rates of the most and least reactive analogs (with the exception of non-phosphorylated nucleosides) differing only by a factor of 5.

THE ALKALINE CLEAVAGE OF o-NITROBENZYLTRIMETHYLSILANE SOLVENT EFFECTS IN THE DIOXANE–WATER SYSTEM

1963 ◽  
Vol 41 (6) ◽  
pp. 1525-1530 ◽  
Author(s):  
H. R. Allcock
Keyword(s):  
Transition State ◽  
Solvent Effects ◽  
Water System ◽  
Solvent Polarity ◽  
High Water ◽  
Aqueous Dioxane ◽  
Alkaline Cleavage ◽  
Rate Of Reaction ◽  
Kinetics Of

The kinetics of alkaline cleavage of o-nitrobenzyltrimethylsilane were examined in aqueous dioxane media. At high water concentrations, increases in solvent polarity retard the cleavage, as required by a mechanism involving charge dispersion in the transition state. At high dioxane concentrations, solvent polarity increases are accompanied by increases in the rate of reaction, a result which may reflect association between the solvent components.

Kinetics of the reduction of nicotinonitrile cations by 1,4-dihydronicotinamides

1985 ◽  
Vol 63 (6) ◽  
pp. 1245-1249 ◽  
Author(s):  
John W. Bunting ◽  
John C. Brewer
Keyword(s):  
Ionic Strength ◽  
Transition State ◽  
Isotope Effects ◽  
Kinetic Isotope Effects ◽  
Spectral Studies ◽  
Close Correspondence ◽  
Charge Generation ◽  
Kinetic Isotope ◽  
Hammett Σ Constants ◽  
Kinetics Of

The rates of reduction of a series of 1-(Z-benzyl)nicotinonitrile cations by a series of 1-(X-benzyl)-1,4-dihydronicotinamides have been studied at 25 °C in 20% CH3CN – 80% H2O (pH 7.0 (5 mM phosphate), ionic strength 1.0 (KCl)). Spectral studies indicate the formation of 1,4-dihydronicotinonitrile products, without the formation of the isomeric 1,2-dihydro- or 1,6-dihydro-nicotinamide intermediates. Second-order rate constants (k2) for these reductions are closely correlated with the Hammett σ constants for X and Z. Thus, for X = H, log k2 = 0.63σz − 1.05, while for Z = 4-CN, log k2 = −0.64σx − 0.65. The close correspondence between these ρx and ρz values indicates that charge neutralization on the nicotinonitrile cation exactly balances charge generation on the nicotinamide cation product in the rate-determining transition state. Thus the migrating hydrogen species is electrically neutral in the rate-determining transition state, which contrasts with the hydridic transition states previously reported in the reduction of isoquinolinium cations by 1,4-dihydronicotinamides. When 1-benzyl-4,4-dideuterio-1,4-dihydronicotinamide is used as the reductant, primary kinetic isotope effects of 3.0 and 2.7 are observed for the reduction of the 1-methylnicotinonitrile and 1-(4-cyanobenzyl)-nicotinonitrile cations, respectively. These data are evaluated in terms of the various mechanistic possibilities for hydride transfer.

Kinetic medium effects. IV. Transition state activity coefficients in mixed solvents

1972 ◽  
Vol 25 (4) ◽  
pp. 777 ◽  
Author(s):  
PT McTigue ◽  
AR Watkins
Keyword(s):  
Transition State ◽  
Activity Coefficients ◽  
Mixed Solvents ◽  
State Theory ◽  
Medium Effects ◽  
State Activity ◽  
Medium Activity ◽  
Solvent Systems ◽  
Kinetics Of ◽  
Hydrolysis Of

The kinetics of acid hydrolysis of a number of aliphatic acetals have been studied in dimethyl sulphoxide-water and dioxan-water mixtures. Where possible, experimentally measured medium activity coefficients for the acetals in the solvent systems have been used in order to calculate the transition state activity coefficients as a function of solvent composition. These activity coefficients are compared with those calculated for the transition states of other hydrolytic reactions, and with the known activity coefficients of some stable ions. The results show no features inconsistent with the assumptions of transition state theory.

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