Sedimentation coefficient, frictional coefficient, and molecular weight: A preparative ultracentrifuge experiment for the advanced undergraduate laboratory

1982 ◽  
Vol 59 (12) ◽  
pp. 1076 ◽  
Author(s):  
J. R. Wermeling ◽  
H. B. Halsall
Keyword(s):  
Molecular Weight ◽  
Frictional Coefficient ◽  
Sedimentation Coefficient ◽  
Undergraduate Laboratory

Further studies on aspartate transcarbamoylase: molecular weight of the c3r6 complex and analysis of succinate inhibition in the native enzyme

1976 ◽  
Vol 54 (12) ◽  
pp. 1061-1068
Author(s):  
William W.-C. Chan
Keyword(s):  
Molecular Weight ◽  
Competitive Inhibition ◽  
Gel Filtration ◽  
Frictional Coefficient ◽  
Sedimentation Coefficient ◽  
Native Enzyme ◽  
Aspartate Transcarbamoylase ◽  
Unusual Structure ◽  
Regulatory Subunits ◽  
Method Of Calculation

The complex which is formed when excess regulatory subunits (r2) of aspartate transcarbamoylase (EC 2.1.3.2) are added to a dilute solution of the catalytic subunit (c3) has been studied by gel-filtration on Sephadex G-200. The elution volume indicates a Stokes' radius of between 5.42 and 5.92 nm, depending on the method of calculation. Using the sedimentation coefficient of 7.7 S previously determined, the molecular weight is estimated to be close to 200 000, in support of the c3r6 structure proposed earlier for the complex. The calculated frictional coefficient indicates abnormal hydrodynamic properties which are probably due to unusual structure characteristics.The pattern of succinate inhibition of native aspartate transcarbamoylase has also been analyzed. At low concentrations, succinate activates the enzyme, presumably by converting it from the taut state to the relaxed (R) state. Further increase in the succinate concentration leads to competitive inhibition of the R state. Using a novel procedure for analysis of the data, the Michaelis constant for aspartate of the R state has been estimated to be about 7 mM. This value is close to the Km of c3r6 for aspartate, measured under identical conditions. The result therefore provides further evidence suggesting that the c3r6 complex resembles the R state of the native enzyme.

Bestimmung des Molekulargewichtes der 20-β-Hydroxy-steroid-dehydrogenase

1962 ◽  
Vol 17 (7) ◽  
pp. 432-436 ◽  
Author(s):  
Matatiahu Gehatia
Keyword(s):  
Molecular Weight ◽  
Diffusion Coefficient ◽  
Diffusion Coefficients ◽  
Specific Volume ◽  
Sedimentation Coefficient ◽  
Partial Specific Volume ◽  
Hydroxy Steroid ◽  
Steroid Dehydrogenase

The enzyme 20-β-Hydroxy-steroid-dehydrogenase obtained from the culture of Streptomyces hydrogenans and dissolved in 0.05 M Tris puffer, pH 7.3, has been investigated by means of a ultracentrifuge at 20 °C. The sedimentation- as well as the diffusion-coefficients obtained from various solutions at different concentrations were extrapolated to the concentration c = 0. The resulting zero-value for the sedimentation coefficient is s0 = 6.64 s and for the diffusion coefficient is D0 = 5.51 × 10-7 cm2/sec. Supposing the partial specific volume of the enzyme under consideration analogously to other similar proteins is V+=0.749 ml/g, the molecular weight has been estimated as M = 118 400.

scholarly journals PURIFICATION AND PHYSICAL PROPERTIES OF GROUP C STREPTOCOCCAL PHAGE-ASSOCIATED LYSIN

1971 ◽  
Vol 133 (5) ◽  
pp. 1105-1117 ◽  
Author(s):  
Vincent A. Fischetti ◽  
Emil C. Gotschlich ◽  
Alan W. Bernheimer
Keyword(s):  
Molecular Weight ◽  
Enzyme Activity ◽  
Physical Properties ◽  
Total Protein ◽  
Sedimentation Coefficient ◽  
Polyacrylamide Gel ◽  
Single Band ◽  
Purification Procedure ◽  
Sh Group ◽  
Stokes Radius

A purification procedure for the Group C phage-associated lysin is described utilizing tetrathionate to protect the enzyme's -SH group(s) from thiol-inactivating agents. A 652-fold purification has been accomplished yielding a solution in which the enzyme activity corresponds to essentially a single band on polyacrylamide gel which accounts for 70% of the total protein in the preparation. A molecular weight of 101,000 and frictional ratio of 1.526 was determined for the lysin utilizing experimentally determined values for its Stokes radius and sedimentation coefficient.

Strahlenempfindlichkeit von Bakteriophagen-DNS /Radiation sensitivity of Bacteriophage DNA

1969 ◽  
Vol 24 (7) ◽  
pp. 885-893 ◽  
Author(s):  
Thérèse Coquerelle ◽  
Leuthold Bohne ◽  
Ulrich Hagen ◽  
Jürgen Merkwitz
Keyword(s):  
Molecular Weight ◽  
Average Molecular Weight ◽  
Linear Part ◽  
Sedimentation Coefficient ◽  
Radiation Sensitivity ◽  
Quadratic Term ◽  
Molecular Weight Distributions ◽  
Γ Rays ◽  
Higher Doses

DNA isolated from Coli bacteriophage T1 was irradiated in 0.165 ᴍ NaCl with γ-rays. The molecular weight was determined by measurement of the sedimentation coefficient and viscosity. An analysis of the boundary permits the determination of the sedimentation distribution. The distribution of sedimentation coefficients obtained at various DNA concentrations were extrapolated to zero concentration and were transformed into molecular weight distributions. These were used to calculate the weight average molecular weight Mw and the number average molecular weight Mn.The molecular weight of T1-DNA was found to be 32· 106. After irradiation at a concentration of 200 μg/ml, double breaks as well as intermolecular crosslinks could be determined. The number of double breaks showed a rise with dose that can best be described as composed of a linear and a quadratic term. At low doses the crosslinks increase linearly, the rate being approximately half of that for the linear part of the double breaks. After higher doses, where most of the molecules are degraded, apparently no additional crosslinks are produced. No crosslinks were seen in DNA degraded by DNase. The influence of the DNA concentration on the degradation and the formation of crosslinks is discussed.

Propriétés physiques et chimiques des tryptophanases de cinq espèces d'Entérobactériaceae

1975 ◽  
Vol 21 (6) ◽  
pp. 828-833 ◽  
Author(s):  
C. Simard ◽  
A. Mardini ◽  
L. M. Bordeleau
Keyword(s):  
Escherichia Coli ◽  
Amino Acids ◽  
Molecular Weight ◽  
Sedimentation Coefficient ◽  
Species Differentiation ◽  
Proteus Vulgaris ◽  
Amino Acids Composition ◽  
Propriétés Physiques ◽  
Tryptophan Content ◽  
Escherichia Coli B

The molecular weight, sedimentation coefficient, and amino acids composition were determined on five tryptophanases (TPases) from Escherichia coli B and E. aurescens, Shigella alkalescens, and Proteus vulgaris and P. morganii. These TPases have identical sedimentation profile and coefficient (9.6 S), and the same molecular weight (220 000). Each enzyme is constituted of four identical subunits having a molecular weight of 55 000. The amino acids composition of these TPases is very similar, with the exception of P. morganii and P. vulgaris TPases which present significative variations in basic amino acids and tryptophan content. The species differentiation of the coli group cannot be made on their TPase characteristics only, contrary to P. morganii and P. vulgaris which can be differentiated between them and from the coli group. [Journal translation]

Purification and studies of some physicochemical properties of glutamine synthetase of Neurospora crassa

1978 ◽  
Vol 56 (10) ◽  
pp. 927-933 ◽  
Author(s):  
W. S. Lin ◽  
M. Kapoor
Keyword(s):  
Molecular Weight ◽  
Amino Acid ◽  
Glutamine Synthetase ◽  
Neurospora Crassa ◽  
Sodium Dodecyl ◽  
Gel Filtration ◽  
Sedimentation Coefficient ◽  
Affinity Column ◽  
Subunit Structure ◽  
Α Helix

Glutamine synthetase (EC 6.3.1.2) of Neurospora crassa was purified to near homogeneity by chromatography on a glutamate–Sepharose affinity column. Its properties, including molecular weight, subunit structure, amino acid composition, and approximate α-helix content, have been examined. In the native state, this enzyme has been demonstrated by gel filtration to be an octamer of molecular weight 360 000 and as having a sedimentation coefficient of 13.2 S by sedimentation velocity measurements. Circular dichroism spectra in the far ultraviolet range suggest an approximate α-helix content of 23–24%. The subunit generated by treatment with urea was found to be 45 000 daltons by gel filtration methods and a molecular weight of 46 000 was calculated for the monomer obtained by sodium dodecyl sulphate (SDS) treatment and electrophoresis in SDS-polyacrylamide gels. Interprotomeric cross-linking experiments, using diimidoesters, suggest the presence of two noncovalently linked tetramers comprising the native octameric structure. Amino acid analyses revealed the presence of six tryptophans, four half cystines, and nine methionine residues per monomer of 45 000 daltons.

Purification of factor EF-P, a protein that stimulates peptide-bond synthesis with certain aminoacyl-tRNA analogues

1979 ◽  
Vol 57 (6) ◽  
pp. 749-757 ◽  
Author(s):  
Bernard R. Glick ◽  
Robert M. Green ◽  
M. Clelia Ganoza
Keyword(s):  
Escherichia Coli ◽  
Molecular Weight ◽  
Protein Biosynthesis ◽  
Bond Formation ◽  
Frictional Coefficient ◽  
Peptide Bond ◽  
Asymmetric Structure ◽  
Peptide Bond Formation ◽  
Apparent Homogeneity ◽  
Stokes Radius

Factor EF-P is a nonribosomal (soluble) protein of Escherichia coli that stimulates peptide bond synthesis when certain aminoacyl-tRNA analogues are used. The purification of this protein to apparent homogeneity is described here. EF-P has a molecular weight of about 21 000, a Stokes radius of 27 Å (1 Å = 0.1 nm), and a frictional coefficient of 1.48, suggesting an asymmetric structure. By this and a number of other criteria, EF-P is a new factor that controls peptide bond formation during protein biosynthesis.

Purification and properties of a β-hexosidase from Sporobolomyces singularis

1969 ◽  
Vol 47 (11) ◽  
pp. 1021-1025 ◽  
Author(s):  
J. A. Blakely ◽  
S. L. MacKenzie
Keyword(s):  
Molecular Weight ◽  
Ammonium Sulfate ◽  
Sedimentation Coefficient ◽  
Polyacrylamide Gel ◽  
Ammonium Sulfate Precipitation ◽  
Purification And Properties

A β-hexosidase has been isolated from Sporobolomyces singularis by conventional techniques involving ammonium sulfate precipitation and chromatography on columns of Sephadex G-200 and DEAE-Sephadex A-50. Electrophoresis on polyacrylamide gel was used as the final preparative step. The sedimentation coefficient (s°20,w) of the enzyme was 7.6 and its molecular weight was in the range 140 000–145 000. Although the β-hexosidase performed the functions of a β-D-galactoside galactohydrolase (β-galactosidase), it also catalyzed the hydrolytic function normally performed by a β-D-glucoside glucohydrolase; both these functions appear to reside in the same molecule.

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