Alignment-Free Classification of G-Protein-Coupled Receptors Using Self-Organizing Maps

Joji M. Otaki; Akihito Mori; Yoshimasa Itoh; Takashi Nakayama; Haruhiko Yamamoto

doi:10.1021/ci050382y

Alignment-Free Classification of G-Protein-Coupled Receptors Using Self-Organizing Maps

Journal of Chemical Information and Modeling ◽

10.1021/ci050382y ◽

2006 ◽

Vol 46 (3) ◽

pp. 1479-1490 ◽

Cited By ~ 15

Author(s):

Joji M. Otaki ◽

Akihito Mori ◽

Yoshimasa Itoh ◽

Takashi Nakayama ◽

Haruhiko Yamamoto

Keyword(s):

G Protein ◽

G Protein Coupled Receptors ◽

Self Organizing Maps ◽

Alignment Free ◽

Free Classification ◽

G Protein Coupled ◽

Self Organizing

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Alignment-Free Classification of G-Protein-Coupled Receptors Using Self-Organizing Maps.

ChemInform ◽

10.1002/chin.200631212 ◽

2006 ◽

Vol 37 (31) ◽

Author(s):

Joji M. Otaki ◽

Akihito Mori ◽

Yoshimasa Itoh ◽

Takashi Nakayama ◽

Haruhiko Yamamoto

Keyword(s):

G Protein ◽

G Protein Coupled Receptors ◽

Self Organizing Maps ◽

Alignment Free ◽

Free Classification ◽

G Protein Coupled ◽

Self Organizing

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The influence of alignment-free sequence representations on the semi-supervised classification of class C G protein-coupled receptors

Medical & Biological Engineering & Computing ◽

10.1007/s11517-014-1218-y ◽

2014 ◽

Vol 53 (2) ◽

pp. 137-149 ◽

Cited By ~ 9

Author(s):

Raúl Cruz-Barbosa ◽

Alfredo Vellido ◽

Jesús Giraldo

Keyword(s):

G Protein ◽

Supervised Classification ◽

G Protein Coupled Receptors ◽

Alignment Free ◽

Class C ◽

G Protein Coupled

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Bioinformatics approaches for the classification of G-protein-coupled receptors

Current Opinion in Pharmacology ◽

10.1016/s1471-4892(03)00005-5 ◽

2003 ◽

Vol 3 (2) ◽

pp. 114-120 ◽

Cited By ~ 27

Author(s):

A Gaulton

Keyword(s):

G Protein ◽

G Protein Coupled Receptors ◽

G Protein Coupled

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Classification of G-protein Coupled Receptors Based on Semi-navïe Bayesian Inference

2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) ◽

10.1109/bibm.2018.8621398 ◽

2018 ◽

Author(s):

Cheng Ling ◽

Lin Yue ◽

Jingyang Gao

Keyword(s):

Bayesian Inference ◽

G Protein ◽

G Protein Coupled Receptors ◽

G Protein Coupled

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Classification of G-protein coupled receptors by alignment-independent extraction of principal chemical properties of primary amino acid sequences

Protein Science ◽

10.1110/ps.2500102 ◽

2002 ◽

Vol 11 (4) ◽

pp. 795-805 ◽

Cited By ~ 73

Author(s):

M. Lapinsh

Keyword(s):

Amino Acid ◽

G Protein ◽

Chemical Properties ◽

Amino Acid Sequences ◽

G Protein Coupled Receptors ◽

Primary Amino ◽

G Protein Coupled

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Deriving structural and functional insights from a ligand-based hierarchical classification of G protein-coupled receptors

Protein Engineering Design and Selection ◽

10.1093/protein/15.1.7 ◽

2002 ◽

Vol 15 (1) ◽

pp. 7-12 ◽

Cited By ~ 24

Author(s):

T.K. Attwood ◽

M.D.R. Croning ◽

A. Gaulton

Keyword(s):

G Protein ◽

Hierarchical Classification ◽

G Protein Coupled Receptors ◽

G Protein Coupled

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Prediction and Classification of Human G-protein Coupled Receptors Based on Support Vector Machines

Genomics Proteomics & Bioinformatics ◽

10.1016/s1672-0229(05)03034-2 ◽

2005 ◽

Vol 3 (4) ◽

pp. 242-246 ◽

Cited By ~ 5

Author(s):

Yun-Fei Wang ◽

Huan Chen ◽

Yan-Hong Zhou

Keyword(s):

Support Vector Machines ◽

G Protein ◽

G Protein Coupled Receptors ◽

Support Vector ◽

Vector Machines ◽

G Protein Coupled

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Classification of G-protein coupled receptors based on support vector machine with maximum relevance minimum redundancy and genetic algorithm

BMC Bioinformatics ◽

10.1186/1471-2105-11-325 ◽

2010 ◽

Vol 11 (1) ◽

pp. 325 ◽

Cited By ~ 39

Author(s):

Zhanchao Li ◽

Xuan Zhou ◽

Zong Dai ◽

Xiaoyong Zou

Keyword(s):

Genetic Algorithm ◽

Support Vector Machine ◽

G Protein ◽

G Protein Coupled Receptors ◽

Support Vector ◽

G Protein Coupled

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GPCRsclass: a web tool for the classification of amine type of G-protein-coupled receptors

Nucleic Acids Research ◽

10.1093/nar/gki351 ◽

2005 ◽

Vol 33 (Web Server) ◽

pp. W143-W147 ◽

Cited By ~ 39

Author(s):

M. Bhasin ◽

G. P. S. Raghava

Keyword(s):

G Protein ◽

G Protein Coupled Receptors ◽

Web Tool ◽

G Protein Coupled

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1P297 Structural Classification of G-protein coupled receptors(GPCR)based on inner polarity environment of the proteins.(Bioinformatics:Structural genomics,The 48th Annual Meeting of the Biophysical Society of Japan)

Seibutsu Butsuri ◽

10.2142/biophys.50.s72_3 ◽

2010 ◽

Vol 50 (supplement2) ◽

pp. S72

Author(s):

Makiko Suwa ◽

Yukiteru Ono ◽

Minoru Sugihara

Keyword(s):

Annual Meeting ◽

G Protein ◽

G Protein Coupled Receptors ◽

Structural Classification ◽

Biophysical Society ◽

G Protein Coupled

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