Dynamics and Entropy of a Calmodulin−Peptide Complex Studied by NMR and Molecular Dynamics†

Ninad V. Prabhu; Andrew L. Lee; A. Joshua Wand; Kim A. Sharp

doi:10.1021/bi026544q

Dynamics and Entropy of a Calmodulin−Peptide Complex Studied by NMR and Molecular Dynamics†

Biochemistry ◽

10.1021/bi026544q ◽

2003 ◽

Vol 42 (2) ◽

pp. 562-570 ◽

Cited By ~ 38

Author(s):

Ninad V. Prabhu ◽

Andrew L. Lee ◽

A. Joshua Wand ◽

Kim A. Sharp

Keyword(s):

Molecular Dynamics ◽

Peptide Complex

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Molecular Dynamics Simulations of a Calmodulin-peptide Complex in Solution

Journal of Biomolecular Structure and Dynamics ◽

10.1080/07391102.2002.10506834 ◽

2002 ◽

Vol 20 (2) ◽

pp. 179-197 ◽

Cited By ~ 9

Author(s):

Cheng Yang ◽

Krzysztof Kuczera

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Peptide Complex ◽

Dynamics Simulations

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Insights into the structure of the LC13 TCR/HLA-B8-EBV peptide complex with molecular dynamics simulations

Cell Biochemistry and Biophysics ◽

10.1007/s12013-011-9151-2 ◽

2011 ◽

Vol 60 (3) ◽

pp. 283-295 ◽

Cited By ~ 11

Author(s):

Athanassios Stavrakoudis

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Peptide Complex ◽

Dynamics Simulations

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Force-based Analysis of Multidimensional Energy Landscapes: Application of Dynamic Force Spectroscopy and Steered Molecular Dynamics Simulations to an Antibody Fragment–Peptide Complex

Journal of Molecular Biology ◽

10.1016/j.jmb.2008.06.065 ◽

2008 ◽

Vol 381 (5) ◽

pp. 1253-1266 ◽

Cited By ~ 41

Author(s):

Julia Morfill ◽

Jan Neumann ◽

Kerstin Blank ◽

Uta Steinbach ◽

Elias M. Puchner ◽

...

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulations ◽

Antibody Fragment ◽

Force Spectroscopy ◽

Steered Molecular Dynamics ◽

Dynamic Force ◽

Energy Landscapes ◽

Dynamic Force Spectroscopy ◽

Peptide Complex ◽

Dynamics Simulations

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Nonequilibrium Molecular Dynamics

10.1017/9781139017848 ◽

2017 ◽

Cited By ~ 25

Author(s):

Billy D. Todd ◽

Peter J. Daivis

Keyword(s):

Molecular Dynamics ◽

Nonequilibrium Molecular Dynamics

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Structure of phosphorus-selenium glasses: results from ab initio molecular dynamics simulations

Molecular Physics ◽

10.1080/002689700162045 ◽

2000 ◽

Vol 98 (11) ◽

pp. 701-707

Author(s):

Alessandro Sergi, Mauro Ferrario, Francesco Bu

Keyword(s):

Molecular Dynamics ◽

Ab Initio ◽

Molecular Dynamics Simulations ◽

Ab Initio Molecular Dynamics ◽

Dynamics Simulations

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Tracer diffusion in perfectly aligned liquid crystalline phases Kinetic theory and molecular dynamics simulations

Molecular Physics ◽

10.1080/00268979709482789 ◽

1997 ◽

Vol 91 (6) ◽

pp. 993-1003 ◽

Cited By ~ 1

Author(s):

ANJALI KHARE ◽

DAVID KOFKE ◽

GLENN EVANS

Keyword(s):

Molecular Dynamics ◽

Kinetic Theory ◽

Molecular Dynamics Simulations ◽

Liquid Crystalline ◽

Tracer Diffusion ◽

Crystalline Phases ◽

Liquid Crystalline Phases ◽

Dynamics Simulations

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A molecular dynamics study of depolarized interaction induced light scattering in room temperature argon

Molecular Physics ◽

10.1080/00268979709482081 ◽

1997 ◽

Vol 92 (1) ◽

pp. 127-134 ◽

Cited By ~ 4

Author(s):

VICTOR TEBOUL

Keyword(s):

Molecular Dynamics ◽

Light Scattering ◽

Room Temperature

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Molecular dynamics of cyclohexane guest molecules in the cyclohexane/thiourea inclusion compound: an incoherent quasielastic neutron scattering investigation

Molecular Physics ◽

10.1080/00268979809482241 ◽

1998 ◽

Vol 93 (4) ◽

pp. 545-554 ◽

Cited By ~ 10

Author(s):

MATTHEW JONES ◽

FRANCOIS GUILLAUME ◽

KENNETH HARRIS ◽

ABIL ALIEV ◽

PASCALE GIRARD ◽

...

Keyword(s):

Molecular Dynamics ◽

Neutron Scattering ◽

Inclusion Compound ◽

Guest Molecules ◽

Quasielastic Neutron ◽

Quasielastic Neutron Scattering

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Conformational analysis of liquid dimethyl carbonate by molecular dynamics calculations

Molecular Physics ◽

10.1080/00268979809482199 ◽

1998 ◽

Vol 93 (1) ◽

pp. 153-158 ◽

Cited By ~ 7

Author(s):

OKIMASA OKADA

Keyword(s):

Molecular Dynamics ◽

Conformational Analysis ◽

Dimethyl Carbonate ◽

Molecular Dynamics Calculations

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ERRATUM Molecular dynamics simulations of liquid crystal phases using atomistic potentials

Molecular Physics ◽

10.1080/002689798167430 ◽

1998 ◽

Vol 95 (1) ◽

pp. 121-121

Author(s):

CARL MCBRIDE MARK R. WILSON JUDITH A. K.

Keyword(s):

Molecular Dynamics ◽

Liquid Crystal ◽

Molecular Dynamics Simulations ◽

Crystal Phases ◽

Dynamics Simulations ◽

Liquid Crystal Phases

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