A Conformational Change in the “Loop E-like” Motif of the Hairpin Ribozyme Is Coincidental with Domain Docking and Is Essential for Catalysis†

Ken J. Hampel; John M. Burke

doi:10.1021/bi0028385

A Conformational Change in the “Loop E-like” Motif of the Hairpin Ribozyme Is Coincidental with Domain Docking and Is Essential for Catalysis†

Biochemistry ◽

10.1021/bi0028385 ◽

2001 ◽

Vol 40 (12) ◽

pp. 3723-3729 ◽

Cited By ~ 11

Author(s):

Ken J. Hampel ◽

John M. Burke

Keyword(s):

Conformational Change ◽

Hairpin Ribozyme ◽

Domain Docking

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Intermolecular domain docking in the hairpin ribozyme

RNA Biology ◽

10.4161/rna.23609 ◽

2013 ◽

Vol 10 (3) ◽

pp. 425-435 ◽

Cited By ~ 3

Author(s):

Minako Sumita ◽

Neil A. White ◽

Kristine R. Julien ◽

Charles G. Hoogstraten

Keyword(s):

Hairpin Ribozyme ◽

Domain Docking

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A Base Change in the Catalytic Core of the Hairpin Ribozyme Perturbs Function but Not Domain Docking†

Biochemistry ◽

10.1021/bi001609f ◽

2001 ◽

Vol 40 (8) ◽

pp. 2580-2587 ◽

Cited By ~ 19

Author(s):

Nils G. Walter ◽

Philip A. Chan ◽

Ken J. Hampel ◽

David P. Millar ◽

John M. Burke

Keyword(s):

Base Change ◽

Hairpin Ribozyme ◽

Catalytic Core ◽

Domain Docking

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MOUVEMENT BROWNIEN DES MACROMOLÉCULES EN SOLUTIONDYNAMICS OF CONFORMATIONAL CHANGE IN CHAIN MOLECULES

Le Journal de Physique Colloques ◽

10.1051/jphyscol:1971541 ◽

1971 ◽

Vol 32 (C5) ◽

pp. C5a-255-C5a-258

Author(s):

W. H. STOCKMAYER

Keyword(s):

Conformational Change ◽

Chain Molecules ◽

Mouvement Brownien

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Faculty Opinions recommendation of A conformational change in the ribosomal peptidyl transferase center upon active/inactive transition.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1000527.4003 ◽

2001 ◽

Author(s):

Poul Nissen

Keyword(s):

Conformational Change ◽

Peptidyl Transferase ◽

Peptidyl Transferase Center

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Faculty Opinions recommendation of Conformational change of the N-domain on formation of the complex between the GTPase domains of Thermus aquaticus Ffh and FtsY.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1006571.79556 ◽

2002 ◽

Author(s):

Kiyoshi Nagai

Keyword(s):

Conformational Change ◽

Thermus Aquaticus

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Faculty Opinions recommendation of Conformational change and protein-protein interactions of the fusion protein of Semliki Forest virus.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1006953.202150 ◽

2004 ◽

Author(s):

Bernard Moss

Keyword(s):

Fusion Protein ◽

Conformational Change ◽

Protein Interactions ◽

Semliki Forest Virus ◽

Protein Protein Interactions

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Faculty Opinions recommendation of Energetics of hydrogen bond networks in RNA: hydrogen bonds surrounding G+1 and U42 are the major determinants for the tertiary structure stability of the hairpin ribozyme.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1010762.164907 ◽

2003 ◽

Author(s):

Scott Silverman

Keyword(s):

Hydrogen Bond ◽

Hydrogen Bonds ◽

Tertiary Structure ◽

Structure Stability ◽

Hairpin Ribozyme ◽

Hydrogen Bond Networks

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Faculty Opinions recommendation of Crystal structure of the ADP-dependent glucokinase from Pyrococcus horikoshii at 2.0-A resolution: a large conformational change in ADP-dependent glucokinase.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1009782.135407 ◽

2002 ◽

Author(s):

Patricia C Weber

Keyword(s):

Crystal Structure ◽

Conformational Change ◽

Pyrococcus Horikoshii ◽

Large Conformational Change

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Faculty Opinions recommendation of Role of an active site guanine in hairpin ribozyme catalysis probed by exogenous nucleobase rescue.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1019915.242452 ◽

2004 ◽

Author(s):

Donald Burke

Keyword(s):

Active Site ◽

Hairpin Ribozyme

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Faculty Opinions recommendation of The catalytic mechanism of hairpin ribozyme studied by hydrostatic pressure.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1027111.327596 ◽

2005 ◽

Author(s):

Peter Unrau

Keyword(s):

Hydrostatic Pressure ◽

Catalytic Mechanism ◽

Hairpin Ribozyme

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