A Whole-Cell Bacterial Biosensor for Blood Markers Detection in Urine

2021 ◽  
Author(s):  
Natalia Barger ◽  
Ilan Oren ◽  
Ximing Li ◽  
Mouna Habib ◽  
Ramez Daniel
Keyword(s):  
Bacterial Biosensor ◽  
Whole Cell

Bacterial bioreporter detects mercury in the presence of excess EDTA

2011 ◽  
Vol 8 (6) ◽  
pp. 552 ◽  
Author(s):  
Amy L. Dahl ◽  
John Sanseverino ◽  
Jean-François Gaillard
Keyword(s):  
Chemical Speciation ◽  
Ethylenediaminetetraacetic Acid ◽  
Electrochemical Analysis ◽  
Bacterial Biosensor ◽  
Whole Cell ◽  
Bioavailable Fraction ◽  
Chemical Measurements ◽  
Kinetic Effects ◽  
Living Organisms ◽  
Equilibrium Calculations

Environmental contextUnderstanding the uptake of mercury by bacteria is essential for predicting the amount of toxic methyl mercury formed in the environment. This study shows that the uptake of mercury by a whole-cell bacterial biosensor as a function of a strong ligand was greater than predicted by chemical speciation measurements or equilibrium calculations. These results call into question the use of chemical measurements and equilibrium modelling for predicting the toxicity of metals to living organisms in the environment and suggest that direct biological methods yield more accurate results. AbstractA whole-cell bacterial reporter was used to probe the bioavailability of mercury in the presence of a strong metal chelator, ethylenediaminetetraacetic acid (EDTA). Strain ARL1 was constructed by inserting a merR::luxCDABE fusion into the chromosome of Escherichia coli. The response of the bioreporter to HgII was monitored as a function of added EDTA. In parallel, square-wave voltammetry (SWV) measurements and thermodynamic calculations using MINEQL were performed to study the chemical speciation of mercury. The amount of electro-labile HgII measured by SWV was similar to the amount of non-complexed HgII predicted from equilibrium calculations. In contrast, the bioavailable fraction measured by the bioreporter was greater than the fraction predicted by either equilibrium calculation or electrochemical analysis. These results suggest that conventional chemical measurements and equilibrium calculations are not necessarily good proxies for predicting the bioavailable metal fraction. Additional factors such as kinetic effects or biological ligand competition must be considered.

HVEM Analysis of Microfilament Patterns in The Margins of Tissue Cells

1980 ◽  
Vol 38 ◽  
pp. 808-811
Author(s):  
Carol Allen
Keyword(s):  
Cell Movement ◽  
Cell Spreading ◽  
Living Cells ◽  
Tissue Cell ◽  
Large Sample Size ◽  
Cell Periphery ◽  
Whole Cell ◽  
Critical Point Drying ◽  
Lamellar Region ◽  
Tissue Cells

When provided with a suitable solid substrate, tissue cells undergo a rapid conversion from the spherical form expressed in suspension culture to a characteristic flattened morphology. As a result of this conversion, called cell spreading, the cell nucleus and organelles come to occupy a central region of “deep cytoplasm” which slopes steeply into a peripheral “lamellar” region less than 1 pm thick at its outer edge and generally free of cell organelles. Cell spreading is accomplished by a continuous outward repositioning of the lamellar margins. Cell translocation on the substrate results when the activity of the lamellae on one side of the cell become dominant. When this occurs, the cell is “polarized” and moves in the direction of the “leading lamellae”. Careful analysis of tissue cell locomotion by time-lapse microphotography (1) has shown that the deformational movements of the leading lamellae occur in a repeating cycle of advance and retreat in the direction of cell movement and that the rate of such deformations are positively correlated with the speed of cell movement. In the present study, the physical basis for these movements of the cell margin has been examined by comparative light microscopy of living cells with whole-mount electron microscopy of fixed cells. Ultrastructural observations were made on tissue cells grown on Formvar-coated grids, fixed with glutaraldehyde, further processed by critical-point drying, and then photographed in the High Voltage Electron Microscope. This processing and imaging system maintains the 3-dimensional organization of the whole cell, the relationship of the cell to the substrate, and affords a large sample size which facilitates quantitative analysis. Comparative analysis of film records of living cells with the whole-cell micrographs revealed that specific patterns of microfilament organization consistently accompany recognizable stages of lamellar formation and movement. The margins of spreading cells and the leading lamellae of locomoting cells showed a similar pattern of MF repositionings (Figs. 1-4). These results will be discussed in terms of a working model for the mechanics of lamellar motility which includes the following major features: (a) lamellar protrusion results when an intracellular force is exerted at a locally weak area of the cell periphery; (b) the association of cortical MFs with one another determines the local resistance to this force; (c) where MF-to-MF association is weak, the cell periphery expands and some cortical MFs are dragged passively forward; (d) contact of the expanded area with the substrate then triggers the lateral association and reorientation of these cortical MFs into MF bundles parallel to the direction of the expansion; and (e) an active interaction between these MF bundles associated with the cortex of the expanded lamellae and the cortical MFs which remained in the sub-lamellar region then pulls the latter MFs forward toward the expanded area. Thus, the advance of the cell periphery on the substrate occurs in two stages: a passive phase in which some cortical MFs are dragged outward by the force acting to expand the cell periphery, and an active phase in which additional cortical MFs are pulled forward by interaction with the first set. Subsequent interactions between peripheral microfilament bundles and filaments in the deeper cytoplasm could then transmit the advance gained by lamellar expansion to the bulk of the cytoplasm.

Permeability Through Bacterial Porins Dictates Whole Cell Compound Accumulation

2020 ◽  
Author(s):  
Silvia Acosta Gutiérrez ◽  
Igor Bodrenko ◽  
Matteo Ceccarelli
Keyword(s):  
Cell Envelope ◽  
Scoring Function ◽  
Modern Medicine ◽  
New Drugs ◽  
Prediction Ability ◽  
Whole Cell ◽  
Virtual Libraries ◽  
Major Bottleneck ◽  
Global Threat ◽  
Bacterial Porins

The lack of new drugs for Gram-negative pathogens is a global threat to modern medicine. The complexity of their cell envelope, with an additional outer membrane, hinders internal accumulation and thus, the access of molecules to targets. Our limited understanding of the molecular basis for compound influx and efflux from these pathogens is a major bottleneck for the discovery of effective antibacterial compounds. Here we analyse the correlation between the whole-cell compound accumulation of ~200 molecules and their predicted porin permeability coefficient (influx), using a recently developed scoring function. We found a strong linear relationship (75%) between the two, confirming porins key role in compound penetration. Further, the remarkable prediction ability of the scoring function demonstrates its potentiality to guide the optimization of hits to leads as well as the possibility of screening ultra-large virtual libraries. Eventually, the analysis of false positives, molecules with high-predicted influx but low accumulation, provides new hints on the molecular properties behind efflux.<br>

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