Determination of Local Structure of 13C Selectively Labeled 47-mer Peptides as a Model for Gly-Rich Region of Nephila clavipes Dragline Silk Using a Combination of 13C Solid-State NMR and MD Simulation

Tetsuo Asakura; Akio Nishimura; Yugo Tasei

doi:10.1021/acs.macromol.8b00536

Determination of Local Structure of 13C Selectively Labeled 47-mer Peptides as a Model for Gly-Rich Region of Nephila clavipes Dragline Silk Using a Combination of 13C Solid-State NMR and MD Simulation

Macromolecules ◽

10.1021/acs.macromol.8b00536 ◽

2018 ◽

Vol 51 (10) ◽

pp. 3608-3619 ◽

Cited By ~ 7

Author(s):

Tetsuo Asakura ◽

Akio Nishimura ◽

Yugo Tasei

Keyword(s):

Solid State ◽

Local Structure ◽

Solid State Nmr ◽

Md Simulation ◽

Nephila Clavipes ◽

Rich Region ◽

Dragline Silk

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Packing Structure of Antiparallel β-Sheet Polyalanine Region in a Sequential Model Peptide of Nephila clavipes Dragline Silk Studied Using 13C Solid-State NMR and MD Simulation

Biomacromolecules ◽

10.1021/acs.biomac.9b00969 ◽

2019 ◽

Vol 20 (10) ◽

pp. 3884-3894 ◽

Cited By ~ 1

Author(s):

Tetsuo Asakura ◽

Akio Nishimura ◽

Akihiro Aoki ◽

Akira Naito

Keyword(s):

Solid State ◽

Solid State Nmr ◽

Md Simulation ◽

Nephila Clavipes ◽

Model Peptide ◽

Dragline Silk ◽

Sequential Model ◽

Packing Structure ◽

Β Sheet

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Changes in the Local Structure of Nephila clavipes Dragline Silk Model Peptides upon Trifluoroacetic Acid, Low pH, Freeze-Drying, and Hydration Treatments Studied by 13C Solid-State NMR

Biomacromolecules ◽

10.1021/acs.biomac.8b01267 ◽

2018 ◽

Vol 19 (11) ◽

pp. 4396-4410 ◽

Cited By ~ 5

Author(s):

Tetsuo Asakura ◽

Hironori Matsuda ◽

Naomi Kataoka ◽

Akiko Imai

Keyword(s):

Solid State ◽

Trifluoroacetic Acid ◽

Local Structure ◽

Solid State Nmr ◽

Freeze Drying ◽

Low Ph ◽

Nephila Clavipes ◽

Dragline Silk ◽

Model Peptides

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13C solid-state NMR study of the 13C-labeled peptide, (E)8GGLGGQGAG(A)6GGAGQGGYGG as a model for the local structure of Nephila clavipes dragline silk (MaSp1) before and after spinning

Biopolymers ◽

10.1002/bip.21718 ◽

2011 ◽

Vol 97 (6) ◽

pp. 347-354 ◽

Cited By ~ 10

Author(s):

Koji Yazawa ◽

Erika Yamaguchi ◽

David Knight ◽

Tetsuo Asakura

Keyword(s):

Solid State ◽

Local Structure ◽

Solid State Nmr ◽

Nephila Clavipes ◽

Dragline Silk ◽

Nmr Study ◽

Before And After

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Structural analysis of the Gly-rich region in spider dragline silk using stable-isotope labeled sequential model peptides and solid-state NMR

Chemical Communications ◽

10.1039/b906145b ◽

2009 ◽

pp. 4176 ◽

Cited By ~ 14

Author(s):

Erika Yamaguchi ◽

Kazuo Yamauchi ◽

Terry Gullion ◽

Tetsuo Asakura

Keyword(s):

Solid State ◽

Structural Analysis ◽

Stable Isotope ◽

Solid State Nmr ◽

Rich Region ◽

Dragline Silk ◽

Sequential Model ◽

Spider Dragline Silk ◽

Model Peptides

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Conformational change of 13C-labeled 47-mer model peptides of Nephila clavipes dragline silk in poly(vinyl alcohol) film by stretching studied by 13C solid-state NMR and molecular dynamics simulation

International Journal of Biological Macromolecules ◽

10.1016/j.ijbiomac.2019.03.112 ◽

2019 ◽

Vol 131 ◽

pp. 654-665 ◽

Cited By ~ 3

Author(s):

Tetsuo Asakura ◽

Hironori Matsuda ◽

Akihiro Aoki ◽

Naomi Kataoka ◽

Akiko Imai

Keyword(s):

Molecular Dynamics ◽

Molecular Dynamics Simulation ◽

Solid State ◽

Conformational Change ◽

Vinyl Alcohol ◽

Solid State Nmr ◽

Dynamics Simulation ◽

Poly Vinyl Alcohol ◽

Nephila Clavipes ◽

Dragline Silk

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Supercontracted spider dragline silk: a solid-state NMR study of the local structure

International Journal of Biological Macromolecules ◽

10.1016/s0141-8130(98)00083-x ◽

1999 ◽

Vol 24 (2-3) ◽

pp. 173-178 ◽

Cited By ~ 55

Author(s):

J.D. van Beek ◽

J. Kümmerlen ◽

F. Vollrath ◽

B.H. Meier

Keyword(s):

Solid State ◽

Local Structure ◽

Solid State Nmr ◽

Dragline Silk ◽

Spider Dragline Silk ◽

Nmr Study

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Local Structure of Crystalline and Amorphous Blast Furnace Slags by Solid-state NMR and MD Simulation

Tetsu-to-Hagane ◽

10.2355/tetsutohagane.95.321 ◽

2009 ◽

Vol 95 (4) ◽

pp. 321-330 ◽

Cited By ~ 8

Author(s):

Koji Kanehashi ◽

Keiji Shimoda ◽

Koji Saito

Keyword(s):

Blast Furnace ◽

Solid State ◽

Local Structure ◽

Solid State Nmr ◽

Md Simulation

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Structure of Characteristic Sequences in Nephila clavipes Dragline Silk (MaSp1) Studied with 13C Solid State NMR

Polymer Journal ◽

10.1295/polymj.36.999 ◽

2004 ◽

Vol 36 (12) ◽

pp. 999-1003 ◽

Cited By ~ 8

Author(s):

Tetsuo Asakura ◽

Mingying Yang ◽

Taiji Kawase

Keyword(s):

Solid State ◽

Solid State Nmr ◽

Nephila Clavipes ◽

Dragline Silk ◽

Characteristic Sequences

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Effect of Dehydration on the Local Structure of Framework Aluminum Atoms in Mixed Linker MIL-53(Al) Materials Studied by Solid-State NMR Spectroscopy

The Journal of Physical Chemistry Letters ◽

10.1021/jz1010835 ◽

2010 ◽

Vol 1 (19) ◽

pp. 2886-2890 ◽

Cited By ~ 38

Author(s):

Yijiao Jiang ◽

Jun Huang ◽

Stefan Marx ◽

Wolfgang Kleist ◽

Michael Hunger ◽

...

Keyword(s):

Solid State ◽

Nmr Spectroscopy ◽

Local Structure ◽

Solid State Nmr ◽

Solid State Nmr Spectroscopy

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Determination of DNA minor groove width in distamycin-DNA complexes by solid-state NMR

Nucleic Acids Research ◽

10.1093/nar/gkg720 ◽

2003 ◽

Vol 31 (17) ◽

pp. 5084-5089 ◽

Cited By ~ 29

Author(s):

G. L. Olsen

Keyword(s):

Solid State ◽

Solid State Nmr ◽

Minor Groove ◽

Groove Width ◽

Dna Complexes ◽

Dna Minor Groove

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