Reaction Kinetics, Product Branching, and Potential Energy Surfaces of 1O2-Induced 9-Methylguanine–Lysine Cross-Linking: A Combined Mass Spectrometry, Spectroscopy, and Computational Study

2019 ◽  
Vol 123 (49) ◽  
pp. 10410-10423
Author(s):  
Yan Sun ◽  
Midas Tsai ◽  
Wenjing Zhou ◽  
Wenchao Lu ◽  
Jianbo Liu
Keyword(s):  
Mass Spectrometry ◽  
Potential Energy ◽  
Reaction Kinetics ◽  
Potential Energy Surfaces ◽  
Computational Study ◽  
Cross Linking ◽  
Energy Surfaces ◽  
Product Branching

scholarly journals Computational study on the mechanisms and kinetics of the CH2BrO2 + ClO reaction in the atmosphere

RSC Advances ◽  
2020 ◽  
Vol 10 (41) ◽  
pp. 24308-24318
Author(s):  
Yunju Zhang ◽  
Yizhen Tang ◽  
Bing He
Keyword(s):  
Potential Energy ◽  
Potential Energy Surfaces ◽  
Computational Study ◽  
Energy Surfaces ◽  
Kinetics Of

The singlet and triplet potential energy surfaces for the CH2BrO2 + ClO reaction are studied at the CCSD(T)/cc-pVTZ//B3LYP/6-311++G(d,p) level.

scholarly journals A kinetic and thermochemical database for organic sulfur and oxygen compounds

2015 ◽  
Vol 17 (20) ◽  
pp. 13625-13639 ◽  
Author(s):  
Caleb A. Class ◽  
Jorge Aguilera-Iparraguirre ◽  
William H. Green
Keyword(s):  
Potential Energy ◽  
Reaction Kinetics ◽  
Potential Energy Surfaces ◽  
Organic Sulfur ◽  
Energy Surfaces

Potential energy surfaces and reaction kinetics were calculated for reactions involving sulfur and oxygen, which are potentially relevant in combustion and desulfurization chemistry.

Theoretical studies on the reaction kinetics of methyl crotonate with hydroxyl radical

2018 ◽  
Vol 2 (2) ◽  
pp. 392-402 ◽  
Author(s):  
Xueyao Zhou ◽  
Yitong Zhai ◽  
Lili Ye ◽  
Lidong Zhang
Keyword(s):  
Potential Energy ◽  
Hydroxyl Radical ◽  
Reaction Kinetics ◽  
Potential Energy Surfaces ◽  
Theoretical Studies ◽  
Energy Surfaces ◽  
Kinetics Of

The potential energy surfaces (PES) for the reactions of methyl crotonate (MC) with hydroxyl radical, including H-abstraction and OH-addition, were explored by the QCISD(T)/CBS//M062x/6-311++G(d,p) and CBS-QB3 methods, respectively.

scholarly journals Computational Study of Inversion-topomerization Pathways in 1,3-Dimethylcyclohexane and 1,4-Dimethylcyclohexane: Ab Initio Conformational Analysis

2020 ◽  
Author(s):  
Huiting Bian ◽  
Yifan Zhang ◽  
Yongjin Wang ◽  
Jun Zhao ◽  
Xiaohui Ruan ◽  
...  
Keyword(s):  
Potential Energy ◽  
Conformational Analysis ◽  
Potential Energy Surfaces ◽  
Computational Study ◽  
Three Dimensional ◽  
Boltzmann Distribution ◽  
Molecular Structures ◽  
Stationary Points ◽  
Energy Surfaces ◽  
Cis And Trans

This work concerns the typical conformational behaviors for di-substituted cyclohexanes that inherently depend on spatial orientations of side chains in flexible cyclic ring. The 1,3-dimethylcyclohexane and 1,4-dimethylcyclohexane in both cis- and trans-configurations were focused here to unravel their conformational inversion-topomerization mechanisms. Full geometry optimizations were performed at B3LYP/6-311++G(d,p) level of theory to explicitly identify all distinguishable molecular structures, and thus explore potential energy surfaces (PES) of the complete interconversion routes for two stereoisomers of 1,3-dimethylcyclohexane and 1,4-dimethylcyclohexane. Additional quantum calculations were carried out by separately applying MP2/6-311++G(d,p), G4, and CCSD(T)/6-311++G(d,p) methods to further refine all PES’ stationary points. With respect to quantum results, the conformational analysis was conducted to gain insight into the determination, thermodynamic stabilities, and relative energies of distinct molecular geometric structures. On base of highly biased conformational equilibria, the temperature-dependent populations of stable local minima for four studied dimethylcyclohexanes were obtained by utilizing Boltzmann distribution within 300-2500 K. Moreover, two unique interconversion processes for them, including inversion and topomerization, were fully investigated, and their potential energy surfaces were illustrated with the rigorous descriptions in two or three-dimensional schemes for clarify.

scholarly journals Synthesis and Computational Study of a Pyridylcarbene Fe(II) Complex: Unexpected Effects of fac/mer Isomerism in Metal-to-Ligand Triplet Potential Energy Surfaces

2018 ◽  
Vol 57 (16) ◽  
pp. 10431-10441 ◽  
Author(s):  
Antonio Francés-Monerris ◽  
Kevin Magra ◽  
Mohamed Darari ◽  
Cristina Cebrián ◽  
Marc Beley ◽  
...  
Keyword(s):  
Potential Energy ◽  
Potential Energy Surfaces ◽  
Computational Study ◽  
Energy Surfaces
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