Fragment Quantum Mechanical Method for Excited States of Proteins: Development and Application to the Green Fluorescent Protein

Xinsheng Jin; William J. Glover; Xiao He

doi:10.1021/acs.jctc.9b00980

Fragment Quantum Mechanical Method for Excited States of Proteins: Development and Application to the Green Fluorescent Protein

Journal of Chemical Theory and Computation ◽

10.1021/acs.jctc.9b00980 ◽

2020 ◽

Vol 16 (8) ◽

pp. 5174-5188

Author(s):

Xinsheng Jin ◽

William J. Glover ◽

Xiao He

Keyword(s):

Green Fluorescent Protein ◽

Excited States ◽

Fluorescent Protein ◽

Quantum Mechanical ◽

Mechanical Method ◽

Quantum Mechanical Method ◽

Green Fluorescent

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Renilla reniformis bioluminescence: luciferase-catalyzed production of nonradiating excited states from luciferin analogs and elucidation of the excited state species involved in energy transfer to Renilla green fluorescent protein

Biochemistry ◽

10.1021/bi00578a011 ◽

1979 ◽

Vol 18 (11) ◽

pp. 2204-2210 ◽

Cited By ~ 47

Author(s):

Russell C. Hart ◽

John C. Matthews ◽

Kazuo Hori ◽

Milton J. Cormier

Keyword(s):

Energy Transfer ◽

Excited State ◽

Green Fluorescent Protein ◽

Excited States ◽

Fluorescent Protein ◽

Renilla Reniformis ◽

Green Fluorescent

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Excited states of the green fluorescent protein chromophore: Performance of ab initio and semi-empirical methods

physica status solidi (b) ◽

10.1002/pssb.201100536 ◽

2011 ◽

Vol 249 (2) ◽

pp. 392-400 ◽

Cited By ~ 24

Author(s):

Marius Wanko ◽

Pablo García-Risueño ◽

Angel Rubio

Keyword(s):

Green Fluorescent Protein ◽

Ab Initio ◽

Excited States ◽

Fluorescent Protein ◽

Empirical Methods ◽

Green Fluorescent ◽

Semi Empirical

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Structure and rotation barriers for ground and excited states of the isolated chromophore of the green fluorescent protein

Chemical Physics Letters ◽

10.1016/s0009-2614(98)01035-5 ◽

1998 ◽

Vol 296 (3-4) ◽

pp. 269-276 ◽

Cited By ~ 69

Author(s):

Alexander A. Voityuk ◽

Maria-Elisabeth Michel-Beyerle ◽

Notker Rösch

Keyword(s):

Green Fluorescent Protein ◽

Excited States ◽

Fluorescent Protein ◽

Green Fluorescent

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Combined quantum-mechanical molecular mechanics calculations with NWChem and AMBER: Excited state properties of green fluorescent protein chromophore analogue in aqueous solution

Journal of Computational Chemistry ◽

10.1002/jcc.24804 ◽

2017 ◽

Vol 38 (18) ◽

pp. 1631-1639 ◽

Cited By ~ 1

Author(s):

Teerapong Pirojsirikul ◽

Andreas W. Götz ◽

John Weare ◽

Ross C. Walker ◽

Karol Kowalski ◽

...

Keyword(s):

Aqueous Solution ◽

Excited State ◽

Green Fluorescent Protein ◽

Molecular Mechanics ◽

Fluorescent Protein ◽

Quantum Mechanical ◽

Molecular Mechanics Calculations ◽

Green Fluorescent

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Real-time imaging of steroid hormone receptor and steroid receptor coactivator-1 in living cells with color variants of green fluorescent protein

Neuroscience Research ◽

10.1016/s0168-0102(00)81227-4 ◽

2000 ◽

Vol 38 ◽

pp. S63

Author(s):

M Nishi

Keyword(s):

Green Fluorescent Protein ◽

Real Time ◽

Hormone Receptor ◽

Fluorescent Protein ◽

Steroid Hormone ◽

Living Cells ◽

Steroid Hormone Receptor ◽

Steroid Receptor Coactivator ◽

Green Fluorescent ◽

Color Variants

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The Green Fluorescent Protein (GFP)

The Bangkok Medical Journal ◽

10.31524/bkkmedj.2013.02.020 ◽

2013 ◽

Vol 05 (01) ◽

pp. 101-102

Author(s):

Phunlerd Piyaraj

Keyword(s):

Green Fluorescent Protein ◽

Fluorescent Protein ◽

Green Fluorescent

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Faculty Opinions recommendation of Shedding light on disulfide bond formation: engineering a redox switch in green fluorescent protein.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1002310.28155 ◽

2001 ◽

Author(s):

Thomas Nystrom

Keyword(s):

Green Fluorescent Protein ◽

Disulfide Bond ◽

Fluorescent Protein ◽

Bond Formation ◽

Disulfide Bond Formation ◽

Redox Switch ◽

Green Fluorescent

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Faculty Opinions recommendation of Development and characterization of a green fluorescent protein-based bacterial biosensor for bioavailable toluene and related compounds.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1005253.88107 ◽

2002 ◽

Author(s):

Bruce Rittmann

Keyword(s):

Green Fluorescent Protein ◽

Fluorescent Protein ◽

Bacterial Biosensor ◽

Green Fluorescent ◽

Related Compounds

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Faculty Opinions recommendation of Rational design of green fluorescent protein mutants as biosensor for bacterial endotoxin.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1008090.101756 ◽

2002 ◽

Author(s):

John Shanklin

Keyword(s):

Green Fluorescent Protein ◽

Rational Design ◽

Fluorescent Protein ◽

Bacterial Endotoxin ◽

Protein Mutants ◽

Green Fluorescent

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Faculty Opinions recommendation of Predictive and interpretive simulation of green fluorescent protein expression in reporter bacteria.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1014953.195413 ◽

2003 ◽

Author(s):

Eric S Gilbert

Keyword(s):

Green Fluorescent Protein ◽

Protein Expression ◽

Green Fluorescent Protein Expression ◽

Fluorescent Protein ◽

Green Fluorescent ◽

Reporter Bacteria

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