scholarly journals Interactions of Water and Alkanes: Modifying Additive Force Fields to Account for Polarization Effects

2019 ◽  
Vol 15 (6) ◽  
pp. 3854-3867 ◽  
Author(s):  
Andreas Krämer ◽  
Frank C. Pickard ◽  
Jing Huang ◽  
Richard M. Venable ◽  
Andrew C. Simmonett ◽  
...  
2009 ◽  
Vol 21 (33) ◽  
pp. 333102 ◽  
Author(s):  
Piotr Cieplak ◽  
François-Yves Dupradeau ◽  
Yong Duan ◽  
Junmei Wang

Author(s):  
Christopher J. Illingworth ◽  
Carmen Domene

The electronic polarizability of an ion or a molecule is a measure of the relative tendency of its electron cloud to be distorted from its normal shape by an electric field. On the molecular scale, in a condensed phase, any species sits in an electric field due to its neighbours, and the resulting polarization is an important contribution to the total interaction energy. Electrostatic interactions are crucial for determining the majority of chemical–physical properties of the system and electronic polarization is a fundamental component of these interactions. Thus, polarization effects should be taken into account if accurate descriptions are desired. In classical computer simulations, the forces required to drive the system are typically based on interatomic interaction potentials derived in part from electronic structure calculations or from experimental data. Owing to the difficulties in including polarization effects in classical force fields, most of them are based just on pairwise additive interaction potentials. At present, major efforts are underway to develop polarizable interaction potentials for biomolecular simulations. In this review, various ways of introducing explicit polarizability into biomolecular models and force fields are reviewed, and the progress that might be achieved in applying such methods to study potassium channels is described.


1999 ◽  
Vol 110 (16) ◽  
pp. 8045-8059 ◽  
Author(s):  
M. A. González ◽  
E. Enciso ◽  
F. J. Bermejo ◽  
M. Bée

Author(s):  
John W. Coleman

In the design engineering of high performance electromagnetic lenses, the direct conversion of electron optical design data into drawings for reliable hardware is oftentimes difficult, especially in terms of how to mount parts to each other, how to tolerance dimensions, and how to specify finishes. An answer to this is in the use of magnetostatic analytics, corresponding to boundary conditions for the optical design. With such models, the magnetostatic force on a test pole along the axis may be examined, and in this way one may obtain priority listings for holding dimensions, relieving stresses, etc..The development of magnetostatic models most easily proceeds from the derivation of scalar potentials of separate geometric elements. These potentials can then be conbined at will because of the superposition characteristic of conservative force fields.


1994 ◽  
Vol 4 (12) ◽  
pp. 2601-2607 ◽  
Author(s):  
A. H. Sihvola
Keyword(s):  

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