Dissipation of Sulfonamides in Soil Emphasizing Taxonomy and Function of Microbiomes by Metagenomic Analysis

2020 ◽  
Vol 68 (47) ◽  
pp. 13594-13607
Author(s):  
Mi Li ◽  
Lingling Rong ◽  
Shifan Zhou ◽  
Xiaoyu Xiao ◽  
Ligui Wu ◽  
...  
Keyword(s):  
Metagenomic Analysis ◽  
And Function

820 – Prospective Longitudinal Gut Metagenomic Analysis Suggests Altered Microbiome Composition and Function in Infants Prior to Celiac Disease Onset

2019 ◽  
Vol 156 (6) ◽  
pp. S-175
Author(s):  
Maureen M. Leonard ◽  
Poorani Subramanian ◽  
Francesco Valitutti ◽  
Gloria Serena ◽  
Victoria Kenyon ◽  
...  
Keyword(s):  
Celiac Disease ◽  
Disease Onset ◽  
Metagenomic Analysis ◽  
Microbiome Composition ◽  
And Function ◽  
Prospective Longitudinal

scholarly journals Corrigendum to: Metagenomic analysis of planktonic riverine microbial consortia using nanopore sequencing reveals insight into river microbe taxonomy and function

GigaScience ◽  
2020 ◽  
Vol 9 (6) ◽  
Author(s):  
Kate Reddington ◽  
David Eccles ◽  
Justin O'Grady ◽  
Devin M Drown ◽  
Lars Hestbjerg Hansen ◽  
...  
Keyword(s):  
Metagenomic Analysis ◽  
Microbial Consortia ◽  
Nanopore Sequencing ◽  
And Function ◽  
Insight Into

Metagenomic analysis revealed beneficial effects of probiotics in improving the composition and function of the gut microbiota in dogs with diarrhoea

2019 ◽  
Vol 10 (5) ◽  
pp. 2618-2629 ◽  
Author(s):  
Haiyan Xu ◽  
Feiyan Zhao ◽  
Qiangchuan Hou ◽  
Weiqiang Huang ◽  
Yahua Liu ◽  
...  
Keyword(s):  
Gut Microbiota ◽  
Metagenomic Analysis ◽  
Functional Genes ◽  
Beneficial Effects ◽  
And Function ◽  
Improve Health

Probiotics-induced potentially beneficial changes in the gut microbiota and its functional genes of diarrhoeal dogs, suggesting probiotics improve health through regulation of the gut microbiota.

scholarly journals Metagenomic analysis of microbial community and function involved in cd-contaminated soil

2018 ◽  
Vol 18 (1) ◽  
Author(s):  
Gang Feng ◽  
Tian Xie ◽  
Xin Wang ◽  
Jiuyuan Bai ◽  
Lin Tang ◽  
...  
Keyword(s):  
Microbial Community ◽  
Contaminated Soil ◽  
Metagenomic Analysis ◽  
And Function

scholarly journals Metagenomic analysis reveals microbial diversity and function in the rhizosphere soil of a constructed wetland

2014 ◽  
Vol 35 (20) ◽  
pp. 2521-2527 ◽  
Author(s):  
Yaohui Bai ◽  
Jinsong Liang ◽  
Ruiping Liu ◽  
Chengzhi Hu ◽  
Jiuhui Qu
Keyword(s):  
Microbial Diversity ◽  
Constructed Wetland ◽  
Rhizosphere Soil ◽  
Metagenomic Analysis ◽  
And Function

scholarly journals Metagenomic Analysis of Microbial Community Structure And Function In A Improved Biofilter With Odorous Gases

2021 ◽  
Author(s):  
Jianguo Ni ◽  
Huayun Yang ◽  
Liqing Chen ◽  
Jiadong Xu ◽  
Liangwei Zheng ◽  
...  
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Microbial Community Structure ◽  
Metabolic Pathway ◽  
Structure And Function ◽  
Metagenomic Analysis ◽  
Industrial Emissions ◽  
Industrial Enterprises ◽  
Before And After ◽  
And Function

Abstract Biofilters have been broadly applied to degrade the odorous gases from industrial emissions. A industrial scale biofilter was set up to treat the odorous gases. To explore biofilter potentials, the microbial community structure and function must be well defined. Using of improved biofilter, the differences in microbial community structures and functions in biofilters before and after treatment were investigated by metagenomic analysis. Odorous gases have the potential to alter the microbial community structure in the sludge of biofilter. A total of 90,016 genes assigned into various functional metabolic pathways were identified. In the improved biofilter, the dominant phyla were Proteobacteria, Planctomycetes, and Chloroflexi, and the dominant genera were Thioalkalivibrio, Thauera, and Pseudomonas. Several xenobiotic biodegradation-related pathways showed significant changes during the treatment process. Compared with the original biofilter, Thermotogae and Crenarchaeota phyla were significantly enriched in the improved biofilter, suggesting their important role in nitrogen-fixing. Furthermore, several nitrogen metabolic pathway-related genes, such as nirA and nifA, and sulfur metabolic pathway-related genes, such as fccB and phsA, were considered to be efficient genes that were involved in removing odorous gases. Our findings can be used for improving the efficiency of biofilter and helping the industrial enterprises to reduce the emission of waste gases.

Evaluation of the nutrition and function of cow and goat milk based on intestinal microbiota by metagenomic analysis

2018 ◽  
Vol 9 (4) ◽  
pp. 2320-2327 ◽  
Author(s):  
Zhaoxia Wang ◽  
Shuaiming Jiang ◽  
Chenchen Ma ◽  
Dongxue Huo ◽  
Qiannan Peng ◽  
...  
Keyword(s):  
16S Rrna ◽  
Gut Microbiota ◽  
Intestinal Microbiota ◽  
High Throughput ◽  
Goat Milk ◽  
16S Rrna Sequencing ◽  
Metagenomic Analysis ◽  
Sequencing Technology ◽  
Rrna Sequencing ◽  
And Function

A high-throughput 16S rRNA sequencing technology was applied to study changes of the intestinal microbiota in mice after the administration of cow and goat milk. We show a correlation between the gut microbiota and the nutrients in milk.

scholarly journals Metagenomic analysis of microbial community structure and function in a improved biofilter with odorous gases

2021 ◽  
Author(s):  
Jianguo Ni ◽  
Liqing Chen ◽  
Jiadong Xu ◽  
Liangwei Zheng ◽  
Guojian Xie ◽  
...  
Keyword(s):  
Community Structure ◽  
Microbial Community ◽  
Microbial Community Structure ◽  
Metabolic Pathway ◽  
Structure And Function ◽  
Metagenomic Analysis ◽  
Industrial Emissions ◽  
Waste Gas ◽  
Industrial Enterprises ◽  
And Function

Abstract BackgroundBiofilters have been broadly applied to degrade the odorous gases from industrial emissions. To explore biofilter potentials, the microbial community structure and function must be well defined. Using of improved biofilter, changes in microbial community structures and functions were investigated by metagenomic analysis. ResultsOdorous gases have the potential to alter the microbial community structure in the sludge of biofilter. A total of 90,016 unigenes assigned into various functional metabolic pathways were identified. In the improved biofilter, the dominant phyla were Proteobacteria, Planctomycetes, and Chloroflexi, and the dominant were Thioalkalivibrio, Thauera, and Pseudomonas. Several xenobiotic biodegradation-related pathways showed significant changes during the treatment process. Compared with the original biofilter, Thermotogae and Crenarchaeota phyla were significantly up-regulated in the improved biofilter, suggesting its important role in nitrogen-fixing. Furthermore, nitrogen metabolic pathway-related genes, such as nirA and nifA, and sulfur metabolic pathway-related genes, such as fccB and phsA, were considered to be efficient genes involved in removing odorous gases. ConclusionsOur findings can be used for improving the efficiency of biofilter and helping the industrial enterprises to reduce the emission of waste gas.

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