Hydrogen/Deuterium Exchange Measurements May Provide an Incomplete View of Protein Dynamics: a Case Study on Cytochrome c

Analytical Chemistry ◽

10.1021/acs.analchem.1c02471 ◽

2021 ◽

Author(s):

Pablo M. Scrosati ◽

Victor Yin ◽

Lars Konermann

Keyword(s):

Cytochrome C ◽

Protein Dynamics ◽

Deuterium Exchange ◽

Hydrogen Deuterium Exchange ◽

Hydrogen Deuterium

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Development of Software for the In-Depth Analysis of Protein Dynamics as Determined by MALDI Mass Spectrometry-Based Hydrogen/Deuterium Exchange

Mass Spectrometry ◽

10.5702/massspectrometry.s0082 ◽

2020 ◽

Vol 8 (2) ◽

pp. S0082-S0082

Author(s):

Tatsuya Yamamoto ◽

Tohru Yamagaki ◽

Honoo Satake

Keyword(s):

Mass Spectrometry ◽

Protein Dynamics ◽

Maldi Mass Spectrometry ◽

Deuterium Exchange ◽

Hydrogen Deuterium Exchange ◽

Depth Analysis ◽

Hydrogen Deuterium

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Protein dynamics and conformational changes explored by hydrogen/deuterium exchange mass spectrometry

Current Opinion in Structural Biology ◽

10.1016/j.sbi.2019.06.007 ◽

2019 ◽

Vol 58 ◽

pp. 305-313 ◽

Cited By ~ 11

Author(s):

Jie Zheng ◽

Timothy Strutzenberg ◽

Bruce D Pascal ◽

Patrick R Griffin

Keyword(s):

Mass Spectrometry ◽

Protein Dynamics ◽

Conformational Changes ◽

Deuterium Exchange ◽

Hydrogen Deuterium Exchange ◽

Exchange Mass Spectrometry ◽

Hydrogen Deuterium ◽

Deuterium Exchange Mass Spectrometry

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The effect of pH and hydrogen-deuterium exchange on the heme pocket structure of cytochrome c probed by resonance Raman spectroscopy

Journal of Molecular Structure ◽

10.1016/0022-2860(95)08725-b ◽

1995 ◽

Vol 349 ◽

pp. 125-128 ◽

Cited By ~ 5

Author(s):

S. Döpner ◽

P. Hildebrandt ◽

G.E. Heibel ◽

F. Vanhecke ◽

A.G. Mauk

Keyword(s):

Raman Spectroscopy ◽

Cytochrome C ◽

Resonance Raman Spectroscopy ◽

Resonance Raman ◽

Deuterium Exchange ◽

Hydrogen Deuterium Exchange ◽

Effect Of Ph ◽

Heme Pocket ◽

Hydrogen Deuterium

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Protein dynamics revealed by hydrogen/deuterium exchange mass spectrometry: Correlation between experiments and simulation

Rapid Communications in Mass Spectrometry ◽

10.1002/rcm.8307 ◽

2019 ◽

Vol 33 (S3) ◽

pp. 83-89 ◽

Cited By ~ 3

Author(s):

Liwen Huang ◽

Pui‐Kin So ◽

Zhong‐Ping Yao

Keyword(s):

Mass Spectrometry ◽

Protein Dynamics ◽

Deuterium Exchange ◽

Hydrogen Deuterium Exchange ◽

Exchange Mass Spectrometry ◽

Hydrogen Deuterium ◽

Deuterium Exchange Mass Spectrometry

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Hydrogen-deuterium exchange of cytochrome c. I. Effect of oxidation state

Biochemistry ◽

10.1021/bi00848a003 ◽

1968 ◽

Vol 7 (8) ◽

pp. 2710-2717 ◽

Cited By ~ 50

Author(s):

David D. Ulmer ◽

Jeremias H. R. Kagi

Keyword(s):

Cytochrome C ◽

Oxidation State ◽

Deuterium Exchange ◽

Hydrogen Deuterium Exchange ◽

Hydrogen Deuterium

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Conformational Properties of the A-State of Cytochrome c Studied by Hydrogen/Deuterium Exchange and Electrospray Mass Spectrometry

Analytical Biochemistry ◽

10.1006/abio.1997.2290 ◽

1997 ◽

Vol 252 (1) ◽

pp. 127-135 ◽

Cited By ~ 9

Author(s):

Claudia S. Maier ◽

Ok-Hee Kim ◽

Max L. Deinzer

Keyword(s):

Mass Spectrometry ◽

Cytochrome C ◽

Electrospray Mass Spectrometry ◽

Deuterium Exchange ◽

Hydrogen Deuterium Exchange ◽

Conformational Properties ◽

Hydrogen Deuterium

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Hydrogen-deuterium exchange of cytochrome c. II. Effect of pH

Biochemistry ◽

10.1021/bi00848a004 ◽

1968 ◽

Vol 7 (8) ◽

pp. 2718-2724 ◽

Cited By ~ 15

Author(s):

Jeremias H. R. Kagi ◽

David D. Ulmer

Keyword(s):

Cytochrome C ◽

Deuterium Exchange ◽

Hydrogen Deuterium Exchange ◽

Effect Of Ph ◽

Hydrogen Deuterium

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Investigating Regulator of G‐protein Signaling (RGS) Protein Dynamics by Hydrogen/Deuterium Exchange

The FASEB Journal ◽

10.1096/fasebj.31.1_supplement.665.8 ◽

2017 ◽

Vol 31 (S1) ◽

Author(s):

Vincent S. Shaw ◽

Anthony L. Schilmiller ◽

Harish Vashisth ◽

Richard R. Neubig

Keyword(s):

Protein Dynamics ◽

G Protein ◽

Deuterium Exchange ◽

G Protein Signaling ◽

Hydrogen Deuterium Exchange ◽

Protein Signaling ◽

Hydrogen Deuterium ◽

Rgs Protein

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Structural Analysis of Diheme Cytochrome c by Hydrogen–Deuterium Exchange Mass Spectrometry and Homology Modeling

Biochemistry ◽

10.1021/bi500420y ◽

2014 ◽

Vol 53 (35) ◽

pp. 5619-5630 ◽

Cited By ~ 9

Author(s):

Ying Zhang ◽

Erica L.-W. Majumder ◽

Hai Yue ◽

Robert E. Blankenship ◽

Michael L. Gross

Keyword(s):

Mass Spectrometry ◽

Structural Analysis ◽

Cytochrome C ◽

Homology Modeling ◽

Deuterium Exchange ◽

Hydrogen Deuterium Exchange ◽

Exchange Mass Spectrometry ◽

Hydrogen Deuterium ◽

Deuterium Exchange Mass Spectrometry

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Complete Extraction of Protein Dynamics Information in Hydrogen/Deuterium Exchange Mass Spectrometry Data

Analytical Chemistry ◽

10.1021/acs.analchem.9b05724 ◽

2020 ◽

Vol 92 (9) ◽

pp. 6486-6494 ◽

Cited By ~ 2

Author(s):

Zhongqi Zhang

Keyword(s):

Mass Spectrometry ◽

Protein Dynamics ◽

Deuterium Exchange ◽

Mass Spectrometry Data ◽

Hydrogen Deuterium Exchange ◽

Exchange Mass Spectrometry ◽

Complete Extraction ◽

Hydrogen Deuterium ◽

Deuterium Exchange Mass Spectrometry

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