Effects of mass extinction and recovery dynamics on long-term evolutionary trends: a morphological study of Strophomenida (Brachiopoda) across the Late Ordovician mass extinction

Paleobiology ◽  
2018 ◽  
Vol 44 (4) ◽  
pp. 603-619 ◽  
Author(s):  
Judith A. Sclafani ◽  
Curtis R. Congreve ◽  
Andrew Z. Krug ◽  
Mark E. Patzkowsky
Keyword(s):  
Mass Extinction ◽  
Phylogenetic Trees ◽  
Late Ordovician ◽  
Ecological Communities ◽  
Evolutionary Trends ◽  
Mass Extinctions ◽  
Principal Coordinates Analysis ◽  
Principal Coordinates ◽  
Recovery Dynamics

AbstractMass extinctions affect the history of life by decimating existing diversity and ecological structure and creating new evolutionary and ecological pathways. Both the loss of diversity during these events and the rebound in diversity following extinction had a profound effect on Phanerozoic evolutionary trends. Phylogenetic trees can be used to robustly assess the evolutionary implications of extinction and origination.We examine both extinction and origination during the Late Ordovician mass extinction. This mass extinction was the second largest in terms of taxonomic loss but did not appear to radically alter Paleozoic marine assemblages. We focus on the brachiopod order Strophomenida, whose evolutionary relationships have been recently revised, to explore the disconnect between the processes that drive taxonomic loss and those that restructure ecological communities.A possible explanation for this disconnect is if extinction and origination were random with respect to morphology. We define morphospace using principal coordinates analysis (PCO) of character data from 61 Ordovician–Devonian taxa and their 45 ancestral nodes, defined by a most parsimonious reconstruction in Mesquite. A bootstrap of the centroid of PCO values indicates that genera were randomly removed from morphospace by the Late Ordovician mass extinction, and new Silurian genera were clustered within a smaller previously unoccupied region of morphospace. Diversification remained morphologically constrained throughout the Silurian and into the Devonian. This suggests that the recovery from the Late Ordovician mass extinction resulted in a long-term shift in strophomenide evolution. More broadly, recovery intervals may hold clues to understanding the evolutionary impact of mass extinctions.

scholarly journals Graptolite community responses to global climate change and the Late Ordovician mass extinction

2016 ◽  
Vol 113 (30) ◽  
pp. 8380-8385 ◽  
Author(s):  
H. David Sheets ◽  
Charles E. Mitchell ◽  
Michael J. Melchin ◽  
Jason Loxton ◽  
Petr Štorch ◽  
...  
Keyword(s):  
Climate Change ◽  
Community Structure ◽  
Mass Extinction ◽  
Climate Changes ◽  
Global Climate ◽  
Extinction Risk ◽  
Late Ordovician ◽  
Ecological Communities ◽  
Mass Extinctions ◽  
The Impact

Mass extinctions disrupt ecological communities. Although climate changes produce stress in ecological communities, few paleobiological studies have systematically addressed the impact of global climate changes on the fine details of community structure with a view to understanding how changes in community structure presage, or even cause, biodiversity decline during mass extinctions. Based on a novel Bayesian approach to biotope assessment, we present a study of changes in species abundance distribution patterns of macroplanktonic graptolite faunas (∼447–444 Ma) leading into the Late Ordovician mass extinction. Communities at two contrasting sites exhibit significant decreases in complexity and evenness as a consequence of the preferential decline in abundance of dysaerobic zone specialist species. The observed changes in community complexity and evenness commenced well before the dramatic population depletions that mark the tipping point of the extinction event. Initially, community changes tracked changes in the oceanic water masses, but these relations broke down during the onset of mass extinction. Environmental isotope and biomarker data suggest that sea surface temperature and nutrient cycling in the paleotropical oceans changed sharply during the latest Katian time, with consequent changes in the extent of the oxygen minimum zone and phytoplankton community composition. Although many impacted species persisted in ephemeral populations, increased extinction risk selectively depleted the diversity of paleotropical graptolite species during the latest Katian and early Hirnantian. The effects of long-term climate change on habitats can thus degrade populations in ways that cascade through communities, with effects that culminate in mass extinction.

Mass extinctions alter extinction and origination dynamics with respect to body size

2021 ◽  
Vol 288 (1960) ◽  
Author(s):  
Pedro M. Monarrez ◽  
Noel A. Heim ◽  
Jonathan L. Payne
Keyword(s):  
Body Size ◽  
Mass Extinction ◽  
Evolutionary Biology ◽  
Marine Animal ◽  
Mass Extinctions ◽  
Extinction Selectivity ◽  
Extinction Events ◽  
Mass Extinction Events ◽  
Marine Biosphere

Whether mass extinctions and their associated recoveries represent an intensification of background extinction and origination dynamics versus a separate macroevolutionary regime remains a central debate in evolutionary biology. The previous focus has been on extinction, but origination dynamics may be equally or more important for long-term evolutionary outcomes. The evolution of animal body size is an ideal process to test for differences in macroevolutionary regimes, as body size is easily determined, comparable across distantly related taxa and scales with organismal traits. Here, we test for shifts in selectivity between background intervals and the ‘Big Five’ mass extinction events using capture–mark–recapture models. Our body-size data cover 10 203 fossil marine animal genera spanning 10 Linnaean classes with occurrences ranging from Early Ordovician to Late Pleistocene (485–1 Ma). Most classes exhibit differences in both origination and extinction selectivity between background intervals and mass extinctions, with the direction of selectivity varying among classes and overall exhibiting stronger selectivity during origination after mass extinction than extinction during the mass extinction. Thus, not only do mass extinction events shift the marine biosphere into a new macroevolutionary regime, the dynamics of recovery from mass extinction also appear to play an underappreciated role in shaping the biosphere in their aftermath.

Geographic variation in turnover and recovery from the Late Ordovician mass extinction

Paleobiology ◽  
2007 ◽  
Vol 33 (3) ◽  
pp. 435-454 ◽  
Author(s):  
Andrew Z. Krug ◽  
Mark E. Patzkowsky
Keyword(s):  
Mass Extinction ◽  
Late Ordovician ◽  
Mass Extinctions ◽  
Climatic Fluctuations ◽  
Extinction Rates ◽  
Large Size ◽  
Extinction Event ◽  
Global Extinction ◽  
Rate Of Recovery ◽  
Extinction Events

AbstractUnderstanding what drives global diversity requires knowledge of the processes that control diversity and turnover at a variety of geographic and temporal scales. This is of particular importance in the study of mass extinctions, which have disproportionate effects on the global ecosystem and have been shown to vary geographically in extinction magnitude and rate of recovery.Here, we analyze regional diversity and turnover patterns for the paleocontinents of Laurentia, Baltica, and Avalonia spanning the Late Ordovician mass extinction and Early Silurian recovery. Using a database of genus occurrences for inarticulate and articulate brachiopods, bivalves, anthozoans, and trilobites, we show that sampling-standardized diversity trends differ for the three regions. Diversity rebounded to pre-extinction levels within 5 Myr in the paleocontinent of Laurentia, compared with 15 Myr or longer for Baltica and Avalonia. This increased rate of recovery in Laurentia was due to both lower Late Ordovician extinction rates and higher Early Silurian origination rates relative to the other continents. Using brachiopod data, we dissected the Rhuddanian recovery into genus origination and invasion. This analysis revealed that standing diversity in the Rhuddanian consisted of a higher proportion of invading taxa in Laurentia than in either Baltica or Avalonia. Removing invading genera from diversity counts caused Rhuddanian diversity to fall in Laurentia. However, Laurentian diversity still rebounded to pre-extinction levels within 10 Myr of the extinction event, indicating that genus origination rates were also higher in Laurentia than in either Baltica or Avalonia. Though brachiopod diversity in Laurentia was lower than in the higher-latitude continents prior to the extinction, increased immigration and genus origination rates made it the most diverse continent following the extinction. Higher rates of origination in Laurentia may be explained by its large size, paleogeographic location, and vast epicontinental seas. It is possible that the tropical position of Laurentia buffered it somewhat from the intense climatic fluctuations associated with the extinction event, reducing extinction intensities and allowing for a more rapid rebound in this region. Hypotheses explaining the increased levels of invasion into Laurentia remain largely untested and require further scrutiny. Nevertheless, the Late Ordovician mass extinction joins the Late Permian and end-Cretaceous as global extinction events displaying an underlying spatial complexity.

scholarly journals Dead clades walking are a pervasive macroevolutionary pattern

2021 ◽  
Vol 118 (15) ◽  
pp. e2019208118
Author(s):  
B. Davis Barnes ◽  
Judith A. Sclafani ◽  
Andrew Zaffos
Keyword(s):  
Mass Extinction ◽  
Bayesian Method ◽  
Marine Invertebrate ◽  
Mass Extinctions ◽  
Extinction Event ◽  
Genus Richness ◽  
Mass Extinction Event ◽  
Extinction Events ◽  
Mass Extinction Events

D. Jablonski [Proc. Natl. Acad. Sci. U.S.A. 99, 8139–8144 (2002)] coined the term “dead clades walking” (DCWs) to describe marine fossil orders that experience significant drops in genus richness during mass extinction events and never rediversify to previous levels. This phenomenon is generally interpreted as further evidence that the macroevolutionary consequences of mass extinctions can continue well past the formal boundary. It is unclear, however, exactly how long DCWs are expected to persist after extinction events and to what degree they impact broader trends in Phanerozoic biodiversity. Here we analyze the fossil occurrences of 134 skeletonized marine invertebrate orders in the Paleobiology Database (paleobiodb.org) using a Bayesian method to identify significant change points in genus richness. Our analysis identifies 70 orders that experience major diversity losses without recovery. Most of these taxa, however, do not fit the popular conception of DCWs as clades that narrowly survive a mass extinction event and linger for only a few stages before succumbing to extinction. The median postdrop duration of these DCW orders is long (>30 Myr), suggesting that previous studies may have underestimated the long-term taxonomic impact of mass extinction events. More importantly, many drops in diversity without recovery are not associated with mass extinction events and occur during background extinction stages. The prevalence of DCW orders throughout both mass and background extinction intervals and across phyla (>50% of all marine invertebrate orders) suggests that the DCW pattern is a major component of macroevolutionary turnover.

Mass Extinctions as Statistical Phenomena: An Examination of the Evidence Using χ2 Tests and Bootstrapping

Paleobiology ◽  
1992 ◽  
Vol 18 (2) ◽  
pp. 148-160 ◽  
Author(s):  
Alan E. Hubbard ◽  
Norman L. Gilinsky
Keyword(s):  
Late Cretaceous ◽  
Mass Extinction ◽  
Late Ordovician ◽  
Statistical Evidence ◽  
Mass Extinctions ◽  
Late Permian ◽  
Turnover Rates ◽  
Historical Evidence ◽  
Extinction Events ◽  
Mass Extinction Events

Although much natural historical evidence has been adduced in support of the occurrence of several mass extinctions during the Phanerozoic, unambiguous statistical confirmation of the mass extinction phenomenon has remained elusive. Using bootstrapping techniques that have not previously been applied to the study of mass extinction, we have amassed strong or very strong statistical evidence for mass extinctions (see text for definitions) during the Late Ordovician, Late Permian, and Late Cretaceous. Bootstrapping therefore verifies three of the mass extinction events that were proposed by Raup and Sepkoski (1982). A small amount of bootstrapping evidence is also presented for mass extinctions in the Induan (Triassic) and Coniacean (Cretaceous) Stages, but high overall turnover rates (including high origination) in the Induan and uncertain estimates of the temporal duration of the Coniacean force us to conclude that the evidence is not compelling.We also present the results of more liberal X2 tests of the differences between expected and observed numbers of familial extinctions for stratigraphic stages. In addition to verifying the mass extinctions identified using bootstrapping, these analyses suggest that several stages that could not be verified as mass extinction stages using bootstrapping (including the last three in the Devonian, and the Norian Stage of the Triassic) should still be regarded as candidates for mass extinction. Further analysis will be required to test these stages in more detail.

scholarly journals Assessment of the Genetic Potential of the Peregrine Falcon (Falco peregrinus peregrinus) Population Used in the Reintroduction Program in Poland

Genes ◽  
2021 ◽  
Vol 12 (5) ◽  
pp. 666
Author(s):  
Karol O. Puchała ◽  
Zuzanna Nowak-Życzyńska ◽  
Sławomir Sielicki ◽  
Wanda Olech
Keyword(s):  
Phylogenetic Trees ◽  
Dna Analysis ◽  
Group Method ◽  
Peregrine Falcon ◽  
Principal Coordinates Analysis ◽  
Pair Group ◽  
Genetic Potential ◽  
Principal Coordinates ◽  
Captive Populations ◽  
Breeding Groups

Microsatellite DNA analysis is a powerful tool for assessing population genetics. The main aim of this study was to assess the genetic potential of the peregrine falcon population covered by the restitution program. We characterized individuals from breeders that set their birds for release into the wild and birds that have been reintroduced in previous years. This was done using a well-known microsatellite panel designed for the peregrine falcon containing 10 markers. We calculated the genetic distance between individuals and populations using the UPGMA (unweighted pair group method with arithmetic mean) method and then performed a Principal Coordinates Analysis (PCoA) and constructed phylogenetic trees, to visualize the results. In addition, we used the Bayesian clustering method, assuming 1–15 hypothetical populations, to find the model that best fit the data. Units were segregated into groups regardless of the country of origin, and the number of alleles and observed heterozygosity were different in different breeding groups. The wild and captive populations were grouped independent of the original population.

scholarly journals Diversification Declines in Major Dinosaurian Clades are not Because of Edge Effects or Incomplete Fossil Sampling

2021 ◽  
Author(s):  
Manabu Sakamoto ◽  
Michael Benton ◽  
Chris Venditti
Keyword(s):  
Edge Effect ◽  
Mass Extinction ◽  
Taxonomic Diversity ◽  
Mass Extinctions ◽  
Model Framework ◽  
Extinction Event ◽  
Under Sampling ◽  
Phylogenetic Model ◽  
Mass Extinction Event

Abstract Signatures of catastrophic mass extinctions have long been reported to be obscured by the edge effect where taxonomic diversity appears to decline gradually. Similarly, models of diversification based on splitting of branches on a phylogenetic tree might also be affected by undersampling of divergences towards the edge. The implication is that long-term declines in diversification recovered from such models – e.g., in dinosaurs – may be artefacts of unsampled divergences. However, this effect has never been explicitly tested in a phylogenetic model framework – i.e., whether phylogenetic nodes (speciation events) close to the edge are under-sampled and if diversification declines are artefacts of such under-sampling. Here, we test whether dinosaur species in temporal proximity to the Cretaceous-Paleogene mass extinction event are associated with fewer nodes than expected, and whether this under-sampling can account for the diversification decline. We find on the contrary that edge taxa have higher numbers of nodes than expected and that accounting for this offset does not affect the diversification decline. We demonstrate that the observed diversification declines in the three major dinosaurian clades in the Late Cretaceous are not artefacts of the edge effect.

Geographic variation in turnover and recovery from the Late Ordovician mass extinction

Paleobiology ◽  
2007 ◽  
Vol 33 (3) ◽  
pp. 435-454 ◽  
Author(s):  
Andrew Z. Krug ◽  
Mark E. Patzkowsky
Keyword(s):  
Mass Extinction ◽  
Late Ordovician ◽  
Mass Extinctions ◽  
Climatic Fluctuations ◽  
Extinction Rates ◽  
Large Size ◽  
Extinction Event ◽  
Global Extinction ◽  
Rate Of Recovery ◽  
Extinction Events

AbstractUnderstanding what drives global diversity requires knowledge of the processes that control diversity and turnover at a variety of geographic and temporal scales. This is of particular importance in the study of mass extinctions, which have disproportionate effects on the global ecosystem and have been shown to vary geographically in extinction magnitude and rate of recovery.Here, we analyze regional diversity and turnover patterns for the paleocontinents of Laurentia, Baltica, and Avalonia spanning the Late Ordovician mass extinction and Early Silurian recovery. Using a database of genus occurrences for inarticulate and articulate brachiopods, bivalves, anthozoans, and trilobites, we show that sampling-standardized diversity trends differ for the three regions. Diversity rebounded to pre-extinction levels within 5 Myr in the paleocontinent of Laurentia, compared with 15 Myr or longer for Baltica and Avalonia. This increased rate of recovery in Laurentia was due to both lower Late Ordovician extinction rates and higher Early Silurian origination rates relative to the other continents. Using brachiopod data, we dissected the Rhuddanian recovery into genus origination and invasion. This analysis revealed that standing diversity in the Rhuddanian consisted of a higher proportion of invading taxa in Laurentia than in either Baltica or Avalonia. Removing invading genera from diversity counts caused Rhuddanian diversity to fall in Laurentia. However, Laurentian diversity still rebounded to pre-extinction levels within 10 Myr of the extinction event, indicating that genus origination rates were also higher in Laurentia than in either Baltica or Avalonia. Though brachiopod diversity in Laurentia was lower than in the higher-latitude continents prior to the extinction, increased immigration and genus origination rates made it the most diverse continent following the extinction. Higher rates of origination in Laurentia may be explained by its large size, paleogeographic location, and vast epicontinental seas. It is possible that the tropical position of Laurentia buffered it somewhat from the intense climatic fluctuations associated with the extinction event, reducing extinction intensities and allowing for a more rapid rebound in this region. Hypotheses explaining the increased levels of invasion into Laurentia remain largely untested and require further scrutiny. Nevertheless, the Late Ordovician mass extinction joins the Late Permian and end-Cretaceous as global extinction events displaying an underlying spatial complexity.

scholarly journals Did a gamma-ray burst initiate the late Ordovician mass extinction?

2004 ◽  
Vol 3 (1) ◽  
pp. 55-61 ◽  
Author(s):  
A.L. Melott ◽  
B.S. Lieberman ◽  
C.M. Laird ◽  
L.D. Martin ◽  
M.V. Medvedev ◽  
...  
Keyword(s):  
Mass Extinction ◽  
Gamma Ray ◽  
Late Ordovician ◽  
Mass Extinctions ◽  
Solar Ultraviolet Radiation ◽  
Observable Universe ◽  
The Earth ◽  
Global Cooling ◽  
History Of ◽  
Solar Ultraviolet

Gamma-ray bursts (GRBs) produce a flux of radiation detectable across the observable Universe. A GRB within our own galaxy could do considerable damage to the Earth's biosphere; rate estimates suggest that a dangerously near GRB should occur on average two or more times per billion years. At least five times in the history of life, the Earth has experienced mass extinctions that eliminated a large percentage of the biota. Many possible causes have been documented, and GRBs may also have contributed. The late Ordovician mass extinction approximately 440 million years ago may be at least partly the result of a GRB. A special feature of GRBs in terms of terrestrial effects is a nearly impulsive energy input of the order of 10 s. Due to expected severe depletion of the ozone layer, intense solar ultraviolet radiation would result from a nearby GRB, and some of the patterns of extinction and survivorship at this time may be attributable to elevated levels of UV radiation reaching the Earth. In addition, a GRB could trigger the global cooling which occurs at the end of the Ordovician period that follows an interval of relatively warm climate. Intense rapid cooling and glaciation at that time, previously identified as the probable cause of this mass extinction, may have resulted from a GRB.

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