scholarly journals A Knockout Experiment: Disciplinary Divides and Experimental Skill in Animal Behaviour Genetics

2015 ◽  
Vol 59 (3) ◽  
pp. 465-485
Author(s):  
Nicole C. Nelson

In the early 1990s, a set of new techniques for manipulating mouse DNA allowed researchers to ‘knock out’ specific genes and observe the effects of removing them on a live mouse. In animal behaviour genetics, questions about how to deploy these techniques to study the molecular basis of behaviour became quite controversial, with a number of key methodological issues dissecting the interdisciplinary research field along disciplinary lines. This paper examines debates that took place during the 1990s between a predominately North American group of molecular biologists and animal behaviourists around how to design, conduct, and interpret behavioural knockout experiments. Drawing from and extending Harry Collins’s work on how research communities negotiate what counts as a ‘well-done experiment,’ I argue that the positions practitioners took on questions of experimental skill reflected not only the experimental traditions they were trained in but also their differing ontological and epistemological commitments. Different assumptions about the nature of gene action, eg., were tied to different positions in the knockout mouse debates on how to implement experimental controls. I conclude by showing that examining representations of skill in the context of a community’s knowledge commitments sheds light on some of the contradictory ways in which contemporary animal behaviour geneticists talk about their own laboratory work as a highly skilled endeavour that also could be mechanised, as easy to perform and yet difficult to perform well.

1999 ◽  
Vol 1 (1) ◽  
pp. 121-125 ◽  
Author(s):  
Marina Picciotto ◽  
Michele Zoli ◽  
Jean-Pierre Changeux

2021 ◽  
pp. 228-234
Author(s):  
V.A. Mazilov ◽  

The article is a review of the book "Sources of the meaning of life: a new method of personality psychodiagnostics" by the Belarusian psychologist K.V. Karpinskij. It is argued that the meaning of life became the subject of special psychological research only in the 20th century. In recent years, there have been many breakthroughs in this area, and undoubted progress is visible. There was a transition to the interpretation of the meaning of life as a systemic, that means, in other words, multicomponent and multilevel mental education. In his previous works K.V. Karpinskij subjected the problem of the psychology of the meaning of life to a comprehensive analysis. This book has no analogues among the observable thematic literature and contains new theoretical ideas, original methodological solutions and rich factual material, which together form a new look at the key methodological issues of the psychology of the meaning of life. First of all, this is a question about the subject and method of research. Despite the fact that the study of the psychology of the meaning of life is largely represented in foreign psychology, the author of the monograph consistently adheres to the methodology of Russian psychology. The book offers the author's methodology "Sources of the meaning of life", which was created with a full understanding of the advantages and disadvantages, opportunities and limitations of existing foreign analogues. Being a diagnostic complex in its composition, this technique has incorporated proven diagnostic techniques, as well as completely new techniques for studying the meaning of life. The methodology clearly surpasses the existing tools in its diagnostic (research) capabilities.


2014 ◽  
Vol 955-959 ◽  
pp. 830-833
Author(s):  
Zhou Xuan ◽  
Zheng Hong Li ◽  
Cheng Zhang ◽  
Hong Dao Zhang ◽  
Ji Lin Li ◽  
...  

The conservation and use of plant genetic diversity are essential to the continued maintenance and improvement of agricultural and forestry production and thus, to sustainable development and poverty alleviation. The dramatic advances in molecular genetics over the last decade years have provided workers involved in the conservation of plant genetic diversity with a range of new techniques. Molecular tools, such as molecular markers and other genomic applications, have been highly successful in characterizing existing genetic variation within species, which generates new genetic diversity that often extends beyond species boundaries. The objectives of this article are to review the molecular basis on plant genetic diversity conservation and summarize the continuously rising and application of molecular tool. Then, we look forward and consider the significant of application of molecular tools in plant genetic diversity conservation.


Author(s):  
Vatsal Patel ◽  
Maahi Patel

The ancient way of sign language is most natural forms of communication. The recognition of sign is place a key role in research field. The development and improvement on this kind of work need more and more new techniques to analyze the accurate results. Many people don't know it and interpreters are hard to come by, we developed a real-time technique for finger spelling-based American Sign Language using neural networks. In our technique, the hand is first sent through a filter, and then it is passed through a classifier, which analyses the class of hand movements. For each alphabet the proposed model has a 96 percent accuracy rate. This model mainly implemented for Dumb and Deaf people for communication.


2019 ◽  
Author(s):  
Erica Tagliatti ◽  
Oscar D. Bello ◽  
Philipe R. F. Mendonça ◽  
Dimitrios Kotzadimitriou ◽  
Elizabeth Nicholson ◽  
...  

AbstractSynaptotagmin1 (Syt1) synchronises neurotransmitter release to action potentials acting as the fast Ca2+ release sensor and as the inhibitor (clamp) of spontaneous and delayed asynchronous release. Whilst the Syt1 Ca2+ activation mechanism has been well characterised, how Syt1 clamps transmitter release remains enigmatic. Here we show that C2B domain-dependent oligomerisation provides the molecular basis for the Syt1 clamping function. This follows from the investigation of a designed mutation (F349A), which selectively destabilises Syt1 oligomerisation. Using combination of fluorescence imaging and electrophysiology in neocortical synapses we show that Syt1F349A is more efficient than wild type Syt1 (Syt1WT) in triggering synchronous transmitter release but fails to clamp spontaneous and Synaptotagmin7 (Syt7)-mediated asynchronous release components both in rescue (Syt1−/− knock-out background) and dominant-interference (Syt1+/+ background) conditions. Thus we conclude that Ca2+-sensitive Syt1 oligomers, acting as an exocytosis clamp, are critical for maintaining the balance among the different modes of neurotransmitter release.


Author(s):  
Per Jensen ◽  

The effect of evolution on genes and the influence of genes and domestication on animal behaviour are discussed.


Blood ◽  
2008 ◽  
Vol 112 (11) ◽  
pp. 19-19
Author(s):  
M. Anna Kowalska ◽  
Karine Amirikian ◽  
Laurent O. Mosnier ◽  
Hartmut Weiler ◽  
Sriram Krishnaswamy ◽  
...  

Abstract Our previous studies have demonstrated that platelet-released PF4 (chemokine CXCL4) promotes survival in a murine LPS-induced endotoxicity model, although the molecular basis for PF4’s protective effects was not fully defined. We hypothesized that enhanced generation of cytoprotective activated protein C (APC) by PF4 might contribute to the molecular mechanism of PF4’s beneficial effects in vivo, based on the observation that PF4 stimulates protein C (PC) activation by the thrombin/thrombomodulin complex both in vitro and in vivo. Here we show that PF4 in vitro affects human (h) PC activation in the presence of human thrombomodulin (hTM) in a bell-shaped concentration curve, i.e. stimulation at low, but inhibition at high PF4 concentrations with a peak around 3 μM. This curve is similar to that seen with PF4 for surface-bound heparin-induced thrombocytopenia (HIT) antigenicity, suggesting that similar complexes of PF4 with glycosaminoglycans (GAGs) that occur in HIT (termed ultralarge complexes (ULC)) are relevant to PF4’s interaction with the hPC/hTM. Addition of heparin blocks PF4 increase of APC generation in a similar fashion as it does for surface-bound ULC. A PF4 variant PF4K50E that poorly forms PF4 tetramers requires 8-fold higher concentrations to enhance APC generation, supporting that PF4 tetramers are central for APC generation as they are for formation of ULC. Neither PF4 nor PF4K50E accelerated in vitro generation of APC in the presence of hTM that was depleted of its chondroitin sulfate chain, suggesting that PF4 binds to this domain on hTM. In vivo studies involving simultaneous infusions of PF4 and thrombin into PF4 knock out (mPF4−/−) mice showed that PF4 leads to enhanced mouse (m) APC generation not seen with infused PF4K50E, consistent with our in vitro studies. We then asked if surface heparan sulfate on the endothelial lining was necessary for the observed PF4 effect on in vivo mAPC formation. We studied mice with a Tie2-Cre conditional knock out of N-deacetylase-N-sulfotransferase-1 activity (NDST-1−/−) that have only 15% of normal endothelial cell surface heparan sulfate content using a similar thrombin/PF4 infusion model. We found that mAPC generation was accelerated by PF4 to the same extent both in NDST1−/−/mPF4−/− and mPF4−/− mice, suggesting that surface GAGs are not involved in the PF4 effect. We have also tested the in vivo effect of PF4 on mAPC formation in TM mutant (TMpro/pro) mice that have impaired capacity for APC formation to further demonstrate that PF4’s positive effect in LPS endotoxic shock survival involves enhanced mAPC generation. Upon injection of high doses of thrombin (40 U/kg), mAPC levels are increased to the same extent in WT and TMpro/pro mice. After injection of low amounts of thrombin (8 U/kg), generation of mAPC was impaired in TMpro/pro as compared to WT mice. Concurrent infusion of PF4 increased mAPC formation in TMpro/pro mice after injection of low doses of thrombin, approximately equal to that seen in WT mice with no PF4 injected. As previously described, TMpro/pro mice had increased mortality after injection of LPS as compared to WT mice; however, with concurrent platelet PF4 overexpression, mortality decreased to that seen in WT mice, suggesting that the biological value of PF4 in LPS endotoxicity is related to its effect on the generation of APC. Thus, these studies support enhanced APC generation as the basis for the positive effect of PF4 on LPS endotoxicity and further define the molecular basis for increased APC generation by PF4 by forming ULC with the chondroitin sulfate domain of TM, but not with heparan sulfate on the vascular surface.


Blood ◽  
2007 ◽  
Vol 109 (10) ◽  
pp. 4135-4142 ◽  
Author(s):  
Rong Zeng ◽  
Rosanne Spolski ◽  
Esther Casas ◽  
Wei Zhu ◽  
David E. Levy ◽  
...  

AbstractInterleukin-21 (IL-21) is a type I cytokine that modulates functions of T, B, natural killer (NK), and myeloid cells. The IL-21 receptor (IL-21R) is closely related to the IL-2 receptor β chain and is capable of transducing signals through its dimerization with the common cytokine receptor γ chain (γc), the protein whose expression is defective in humans with X-linked severe combined immunodeficiency. To clarify the molecular basis of IL-21 actions, we investigated the role of tyrosine residues in the IL-21R cytoplasmic domain. Simultaneous mutation of all 6 tyrosines greatly diminished IL-21–mediated proliferation, whereas retention of tyrosine 510 (Y510) allowed full proliferation. Y510 efficiently mediated IL-21–induced phosphorylation of Stat1 and Stat3, but not of Stat5, and CD8+ T cells from Stat1/Stat3 double knock-out mice exhibited decreased proliferation in response to IL-21 + IL-15. In addition, IL-21 weakly induced phosphorylation of Shc and Akt, and consistent with this, specific inhibitors of the MAPK and PI3K pathways inhibited IL-21–mediated proliferation. Collectively, these data indicate the involvement of the Jak-STAT, MAPK, and PI3K pathways in IL-21 signaling.


2012 ◽  
pp. 31-35
Author(s):  
András Halász ◽  
Géza Nagy

Ethology, the research field of animal behaviour, during the past half century developed into an independent science and became more important in recent years as the farming industry has turned toward quality production. Farm animals respond for every environmental factor. Essential to know the answers to avoid unpleasant economic consequences. Based on the shepherds’ experience, this science has merged with modern technology, constantly expanding and searching new methods. According to the literature the article summarizes the observation methods in cattle grazing. This paper introduces the beginnings and shows the future trends. Finally we share personal experiences as the Hungarian Grey cattle grazing behaviour at conditions of Hortobágy, Hungary.


eLife ◽  
2020 ◽  
Vol 9 ◽  
Author(s):  
Haluk Lacin ◽  
W Ryan Williamson ◽  
Gwyneth M Card ◽  
James B Skeath ◽  
James W Truman

The Drosophila ventral nerve cord (VNC) is composed of thousands of neurons born from a set of individually identifiable stem cells. The VNC harbors neuronal circuits required to execute key behaviors, such as flying and walking. Leveraging the lineage-based functional organization of the VNC, we investigated the developmental and molecular basis of behavior by focusing on lineage-specific functions of the homeodomain transcription factor, Unc-4. We found that Unc-4 functions in lineage 11A to promote cholinergic neurotransmitter identity and suppress the GABA fate. In lineage 7B, Unc-4 promotes proper neuronal projections to the leg neuropil and a specific flight-related take-off behavior. We also uncovered that Unc-4 acts peripherally to promote proprioceptive sensory organ development and the execution of specific leg-related behaviors. Through time-dependent conditional knock-out of Unc-4, we found that its function is required during development, but not in the adult, to regulate the above events.


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