Tissue-Specific Alternative Splicing Remodels Protein-Protein Interaction Networks

Jonathan D. Ellis; Miriam Barrios-Rodiles; Recep Çolak; Manuel Irimia; TaeHyung Kim; John A. Calarco; Xinchen Wang; Qun Pan; Dave O'Hanlon; Philip M. Kim; Jeffrey L. Wrana; Benjamin J. Blencowe

doi:10.1016/j.molcel.2012.05.037

Tissue-Specific Alternative Splicing Remodels Protein-Protein Interaction Networks

Molecular Cell ◽

10.1016/j.molcel.2012.05.037 ◽

2012 ◽

Vol 46 (6) ◽

pp. 884-892 ◽

Cited By ~ 253

Author(s):

Jonathan D. Ellis ◽

Miriam Barrios-Rodiles ◽

Recep Çolak ◽

Manuel Irimia ◽

TaeHyung Kim ◽

...

Keyword(s):

Alternative Splicing ◽

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Tissue Specific ◽

Protein Protein Interaction ◽

Specific Alternative ◽

Protein Protein Interaction Networks

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Effect of Alternative Splicing on the Degree Centrality of Nodes in Protein–Protein Interaction Networks of Homo sapiens

Journal of Proteome Research ◽

10.1021/pr4000812 ◽

2013 ◽

Vol 12 (4) ◽

pp. 1980-1988 ◽

Cited By ~ 7

Author(s):

Anupam Sinha ◽

Hampapathalu Adimurthy Nagarajaram

Keyword(s):

Alternative Splicing ◽

Protein Interaction ◽

Homo Sapiens ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Degree Centrality ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Topological and organizational properties of the products of house-keeping and tissue-specific genes in protein-protein interaction networks

BMC Systems Biology ◽

10.1186/1752-0509-3-32 ◽

2009 ◽

Vol 3 (1) ◽

pp. 32 ◽

Cited By ~ 24

Author(s):

Wen-hsien Lin ◽

Wei-chung Liu ◽

Ming-jing Hwang

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Tissue Specific ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Faculty Opinions recommendation of Modular decomposition of protein-protein interaction networks.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1020428.232579 ◽

2004 ◽

Author(s):

Ruedi Aebersold

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Modular Decomposition ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Faculty Opinions recommendation of Integrating protein-protein interaction networks with phenotypes reveals signs of interactions.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.718178553.793487291 ◽

2013 ◽

Author(s):

Marc Therrien ◽

Dariel Ashton-Beaucage

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Inferring Protein-Protein Interaction Networks From Mass Spectrometry-Based Proteomic Approaches: A Mini-Review

Computational and Structural Biotechnology Journal ◽

10.1016/j.csbj.2019.05.007 ◽

2019 ◽

Vol 17 ◽

pp. 805-811 ◽

Cited By ~ 7

Author(s):

Kumar Yugandhar ◽

Shagun Gupta ◽

Haiyuan Yu

Keyword(s):

Mass Spectrometry ◽

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Better Link Prediction for Protein-Protein Interaction Networks

2020 IEEE 20th International Conference on Bioinformatics and Bioengineering (BIBE) ◽

10.1109/bibe50027.2020.00017 ◽

2020 ◽

Author(s):

Ho Yin Yuen ◽

Jesper Jansson

Keyword(s):

Protein Interaction ◽

Link Prediction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Is the intrinsic disorder of proteins the cause of the scale-free architecture of protein–protein interaction networks?

PROTEOMICS ◽

10.1002/pmic.200600455 ◽

2007 ◽

Vol 7 (6) ◽

pp. 961-964 ◽

Cited By ~ 15

Author(s):

Santiago Schnell ◽

Santo Fortunato ◽

Sourav Roy

Keyword(s):

Protein Interaction ◽

Intrinsic Disorder ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Scale Free ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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On Identifying and Analyzing Significant Nodes in Protein-Protein Interaction Networks

2013 IEEE 13th International Conference on Data Mining Workshops ◽

10.1109/icdmw.2013.126 ◽

2013 ◽

Cited By ~ 1

Author(s):

Rohan Khazanchi ◽

Kathryn Dempsey ◽

Ishwor Thapa ◽

Hesham Ali

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Establishing a protein-protein interaction networks for hypertrophic cardiomyopathy

Journal of Electrocardiology ◽

10.1016/j.jelectrocard.2010.12.114 ◽

2011 ◽

Vol 44 (2) ◽

pp. e47-e48

Author(s):

Chia-Chun Lu ◽

Ching-Shiun Chang ◽

Ming-Ju Tsai ◽

Yu-Shan Chen ◽

Yueh Chen ◽

...

Keyword(s):

Hypertrophic Cardiomyopathy ◽

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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Influence of homology and node age on the growth of protein-protein interaction networks

Physical Review E ◽

10.1103/physreve.86.041919 ◽

2012 ◽

Vol 86 (4) ◽

Author(s):

Arianna Bottinelli ◽

Bruno Bassetti ◽

Marco Cosentino Lagomarsino ◽

Marco Gherardi

Keyword(s):

Protein Interaction ◽

Protein Interaction Networks ◽

Interaction Networks ◽

Protein Protein Interaction ◽

Protein Protein Interaction Networks

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