Simulating soil C dynamics with EPIC: Model description and testing against long-term data

2006 ◽  
Vol 192 (3-4) ◽  
pp. 362-384 ◽  
Author(s):  
R.C. Izaurralde ◽  
J.R. Williams ◽  
W.B. McGill ◽  
N.J. Rosenberg ◽  
M.C. Quiroga Jakas
2021 ◽  
Author(s):  
Weilin Huang ◽  
Peter van Bodegom ◽  
Toni Viskari ◽  
Jari Liski ◽  
Nadejda Soudzilovskaia

<p>Mycorrhizae, a plant-fungal symbiosis, is an important contributor to below ground-microbial interactions, and hypothesized to play a paramount role in soil carbon (C) sequestration. Ectomycorrhizae (EM) and arbuscular mycorrhizae (AM) are the two dominant forms of mycorrhizae featured by nearly all Earth plant species. However, the difference in the nature of their contributions to the processes of plant litter decomposition is still understood poorly. Current soil carbon models treat mycorrhizal impacts on the processes of soil carbon transformation as a black box. This retards scientific progress in mechanistic understanding of soil C dynamics.</p><p>We examined four alternative conceptualizations of the mycorrhizal impact on plant litter C transformations, by integrating AM and EM fungal impacts on litter C pools of different recalcitrance into the soil carbon model Yasso15. The best performing concept featured differential impacts of EM and AM on a combined pool of labile C, being quantitatively distinct from impacts of AM and EM on a pool of recalcitrant C.</p><p>Analysis of time dynamics of mycorrhizal impacts on soil C transformations demonstrated that these impacts are larger at the long-term (>2.5yrs) litter decomposition processes, compared to the short-term processes. We detected that arbuscular mycorrhizae controls shorter term decomposition of labile carbon compounds, while ectomycorrhizae dominate the long term decomposition processes of highly recalcitrant carbon elements. Overall, adding our mycorrhizal module into the Yasso model greatly improved the accuracy of the temporal dynamics of carbon sequestration.</p><p>A sensitivity analysis of litter decomposition to climate and mycorrhizal factors indicated that ignoring the mycorrhizal impact on the decomposition leads to an overestimation of climate impacts. This suggests that being co-linear with climate impacts, mycorrhizal impacts could be partly hidden within climate factors in soil carbon models, reducing the capability of such models to mechanistically predict impacts of climate vs vegetation change on soil carbon dynamics.</p><p>Our results provide a benchmark to mechanistic modelling of microbial impacts on soil C dynamics. This work opens new pathways to examining the impacts of land-use change and climate change on plant-microbial interactions and their role in soil C dynamics, allowing the integration of microbial processes into global vegetation models used for policy decisions on terrestrial carbon monitoring.</p>


2014 ◽  
Vol 136 ◽  
pp. 38-50 ◽  
Author(s):  
João Carlos de Moraes Sá ◽  
Florent Tivet ◽  
Rattan Lal ◽  
Clever Briedis ◽  
Daiani Cruz Hartman ◽  
...  

2017 ◽  
Author(s):  
Viktoria Oliver ◽  
Imma Oliveras ◽  
Jose Kala ◽  
Rebecca Lever ◽  
Yit Arn Teh

Abstract. Montane tropical soils are a large carbon (C) reservoir, acting as both a source and a sink of CO2. Enhanced CO2 emissions originate, in large part, from the decomposition and losses of soil organic matter (SOM) following anthropogenic disturbances. Therefore, quantitative knowledge of the stabilization and decomposition of SOM is necessary in order to understand, assess and predict the impact of land management in the tropics. In particular, labile SOM is an early and sensitive indicator of how SOM responds to changes in land use and management practices, which could have major implications for long term carbon storage and rising atmospheric CO2 concentrations. The aim of this study was to investigate the impacts of grazing and fire history on soil C dynamics in the Peruvian montane grasslands; an understudied ecosystem, which covers approximately a quarter of the land area in Peru. A combination of density and particle-size fractionation was used to quantify the labile and stable organic matter pools, along with soil CO2 flux and decomposition measurements. Grazing and burning together significantly increased soil CO2 fluxes and decomposition rates and reduced temperature as a driver. Although there was no significant effect of land use on total soil C stocks, the combination of burning and grazing decreased the proportion of C in the free LF, especially at the lower depths (10–20 and 20–30 cm). The free LF in the control soils made 20 % of the bulk soil mass and 30 % of the soil C content compared to the burnt-grazed soils, which had the smallest recovery of free LF (10 %) and significantly lower C content (14 %). The burnt soils had a much higher proportion of C in the occluded LF (12 %) compared to the non-burnt soils (7 %) and there was no significant difference among the treatments in the heavy F (~ 70 %). The synergistic effect of burning and grazing caused changes to the soil C dynamics. CO2 fluxes were increased and the dominant temperature driver was obscured by some other process, such as changes in plant C and N allocation promoting autotrophic respiration. In addition, the free LF was negatively affected when these two anthropogenic activities took place on the same site. Most likely a result of reduced detritus being incorporated into the soil. A positive finding from this study is that the total soil C stocks were not significantly affected and the long term C storage in the occluded LF and heavy F were not negatively impacted. Possibly this is because of low intensity fire, fire-resilient grasses and the grazing pressure is below the threshold to cause severe degradation.


2018 ◽  
Author(s):  
Enzai Du

AbstractBased on results of a 26-year soil warming experiment (soil temperature being elevated by 5 °C) in a Harvard hardwood forest, Melillo et al. demonstrated a four-phase pattern of long-term warming effect on soil respiration, while the mechanisms were not fully elucidated because they neglected the indirect effect due to warming-induced soil drying. By showing a significant correlation between precipitation anomaly and inter-annual variation of warming effect on soil respiration, we suggest a nonnegligible role of warming-induced soil drying in regulating the long-term warming effect on soil respiration. Our analysis recommends further efforts to consider both the direct and indirect (i.e., warming-induced soil drying) warming effects to gain more in-depth understanding of the long-term soil C dynamics.


2021 ◽  
Author(s):  
Roberta Pulcher ◽  
Enrico Balugani ◽  
Maurizio Ventura ◽  
Diego Marazza

Abstract. Biochar production and application as soil amendment is a promising carbon (C) negative technology to increase soil C sequestration and mitigate climate change. However, there is a lack of knowledge about biochar degradation rate in soil and its effects on native soil organic carbon (SOC), mainly due to the absence of long term experiments performed in field conditions. The aim of this work was to investigate the long term degradation rate of biochar in a field experiment of 8 years in a poplar short rotation coppice plantation in Piedmont (Italy), and to modify the RothC model to assess and predict how biochar influences soil C dynamics. The RothC model was modified by including two biochar pools, labile (4 % of the total biochar mass) and recalcitrant (96 %), and the priming effect of biochar on SOC. The model was calibrated and validated using data from the field experiment. The results confirm that biochar degradation can be faster in field conditions in comparison to laboratory experiments; nevertheless, it can contribute to substantially increase the soil C stock in the long-term. Moreover, this study shows that the modified RothC model was able to simulate the dynamics of biochar and SOC degradation in soils in field conditions in the long term, at least in the specific conditions examined.


2020 ◽  
Author(s):  
Chris McCloskey ◽  
Guy Kirk ◽  
Wilfred Otten ◽  
Eric Paterson

<p>Our understanding of soil carbon (C) dynamics is limited; field measurements necessarily conflate fluxes from plant and soil sources and we therefore lack long-term field-scale data on soil C fluxes to use to test and improve soil C models. Furthermore, it is often unclear whether findings from lab-based studies, such as the presence of rhizosphere priming, apply to soil systems in the field. It is particularly important that we are able to understand the roles of soil temperature and moisture, and plant C inputs, as drivers of soil C dynamics in order to predict how changing climate and plant productivity may affect the net C balance of soils. We have developed a field laboratory with which to generate much-needed long-term C flux data under field conditions, giving near-continuous measurements of plant and soil C fluxes and their drivers.</p><p>The laboratory contains 24 0.8-m diameter, 1-m deep, naturally-structured soil monoliths of two contrasting C3 soils (a clay-loam and a sandy soil) in lysimeters. These are sown with a C4 grass (<em>Bouteloua dactyloides</em>), providing a large difference in C isotope signature between C4 plant respiration and C3-origin soil organic matter (SOM) decomposition, which enables clear partitioning of the net C flux. This species is used as a pasture grass in the United States, and regular trimming through the growing season simulates low-intensity grazing. The soil monoliths are fitted with gas flux chambers and connected via an automated sampling loop to a cavity ring-down spectrometer, which measures the concentration and <sup>12</sup>C:<sup>13</sup>C isotopic ratio of CO<sub>2</sub> during flux chamber closure. Depth-resolved measurements of soil temperature and moisture in each monolith are made near-continuously, along with measurements of incoming solar radiation, rainfall, and air temperature a the field site. The gas flux chambers are fitted with removable reflective backout covers allowing flux measurements both incorporating, and in the absence of, photosynthesis.</p><p>We have collected net ecosystem respiration data, measurements of photosynthesis, and recorded potential drivers of respiration over two growing seasons through 2018 and 2019. Through partitioning fluxes between plant respiration and SOM mineralisation we have revealed clear diurnal trends in both plant and soil C fluxes, along with overarching seasonal trends which modify both the magnitude of fluxes and their diurnal patterns. Rates of photosynthesis have been interpolated between measurement periods using machine learning to generate a predictive model, which has allowed us to investigate the effect of plant productivity on SOM mineralisation and assess whether rhizosphere priming can be detected in our system. Through regression analyses and linear mixed effects modelling we have evaluated the roles of soil temperature, soil moisture, and soil N content as drivers of variation in plant and soil respiration in our two contrasting soils. This has shown soil temperature to be the most important control on SOM mineralisation, with soil moisture content playing only a minor role. We have also used our empirical models to suggest how the carbon balance of pasture and grassland soils may respond to warming temperatures.</p>


2005 ◽  
Vol 85 (Special Issue) ◽  
pp. 467-480 ◽  
Author(s):  
H. H. Janzen

The global carbon (C) cycle is changing, as evident from abrupt increases in atmospheric CO2. These changes have sparked interest in agricultural soils as potential repositories for excess atmospheric C. Our perspective on soil C, therefore, has shifted: once, we focused mainly on how soil C affected productivity within agroecosystems; now we see also how C dynamics in agricultural soils exert influences far beyond the farm. We have long used soil C as an indicator of soil quality; now we may want to use soil C also as a broader indicator of ecosystem response. To prompt further discussion, I offer some tentative thoughts about how we might use soil C as an indicator on a changing earth. They include: using soil C to measure changes across time, not only across space; devising more sensitive measures of soil C change; quantifying soil C across four dimensions; measuring the nature of C, as well as its amount; using soil C alongside other indicators; finding better ways of admitting our uncertainty; establishing long-term sites for our successors to measure soil C change; and following flows of C past the farm fences. Recent worries about global warming have focused our attention on “sequestering” soil C to remove atmospheric CO2. That aim may be worthy, but perhaps too narrow; a broader goal might be to ensure the productivity, permanence, and health of our agroecosystems and adjacent environments – and use C storage as a measure of progress toward that goal. Key words: Soil organic matter, global carbon cycle, carbon sequestration, global change


2017 ◽  
Vol 14 (24) ◽  
pp. 5633-5646 ◽  
Author(s):  
Viktoria Oliver ◽  
Imma Oliveras ◽  
Jose Kala ◽  
Rebecca Lever ◽  
Yit Arn Teh

Abstract. Montane tropical soils are a large carbon (C) reservoir, acting as both a source and a sink of CO2. Enhanced CO2 emissions originate, in large part, from the decomposition and losses of soil organic matter (SOM) following anthropogenic disturbances. Therefore, quantitative knowledge of the stabilization and decomposition of SOM is necessary in order to understand, assess and predict the impact of land management in the tropics. In particular, labile SOM is an early and sensitive indicator of how SOM responds to changes in land use and management practices, which could have major implications for long-term carbon storage and rising atmospheric CO2 concentrations. The aim of this study was to investigate the impacts of grazing and fire history on soil C dynamics in the Peruvian montane grasslands, an understudied ecosystem, which covers approximately a quarter of the land area in Peru. A density fractionation method was used to quantify the labile and stable organic matter pools, along with soil CO2 flux and decomposition measurements. Grazing and burning together significantly increased soil CO2 fluxes and decomposition rates and reduced temperature as a driver. Although there was no significant effect of land use on total soil C stocks, the combination of burning and grazing decreased the proportion of C in the free light fraction (LF), especially at the lower depths (10–20 and 20–30 cm). In the control soils, 20 % of the material recovered was in the free LF, which contained 30 % of the soil C content. In comparison, the burnt–grazed soil had the smallest recovery of the free LF (10 %) and a significantly lower C content (14 %). The burnt soils had a much higher proportion of C in the occluded LF (12 %) compared to the not-burnt soils (7 %) and there was no significant difference among the treatments in the heavy fraction (F) ( ∼  70 %). The synergistic effect of burning and grazing caused changes to the soil C dynamics. CO2 fluxes were increased and the dominant temperature driver was obscured by some other process, such as changes in plant C and N allocation. In addition, the free LF was reduced when these two anthropogenic activities took place on the same site – most likely a result of reduced detritus being incorporated into the soil. A positive finding from this study is that the total soil C stocks were not significantly affected and the long-term (+10 years) C storage in the occluded LF and heavy F were not negatively impacted. Possibly this is because of low-intensity fire, fire-resilient grasses and because the grazing pressure is below the threshold necessary to cause severe degradation.


2011 ◽  
Vol 8 (3) ◽  
pp. 5955-5990 ◽  
Author(s):  
M. F. Cotrufo ◽  
G. Alberti ◽  
I. Inglima ◽  
H. Marjanović ◽  
D. LeCain ◽  
...  

Abstract. Precipitation patterns are expected to change in the Mediterranean region within the next decades, with projected decreases in total rainfall and increases in extreme events. We manipulated precipitation patterns in a Mediterranean woodland, dominated by Arbutus unedo L., to study the effects of changing precipitation regimes on above-ground net primary production (ANPP) and soil C dynamics, specifically plant-derived C input to soil and soil respiration (SR). Experimental plots were exposed to either a 20 % reduction of throughfall or to water addition targeted at maintaining soil water content above a minimum of 10 % v/v. Treatments were compared to control plots which received ambient precipitation. The throughfall manipulation experiment started in 2004 and we report data up to the 2009 growing season. Enhanced soil moisture during summer months highly stimulated annual stem primary production, litter fall, SR and net annual plant-derived C input to soil which on average increased by 130 %, 26 %, 50 % and 220 %, respectively, as compared to control. In contrast, the 20 % reduction in throughfall (equivalent to 10 % reduction of precipitation) did not significantly change soil moisture at the site, and therefore did not significantly affect ANPP or SR. We conclude that minor changes (around 10 % reduction) in precipitation amount are not likely to significantly affect ANPP or soil C dynamics in Mediterranean woodland. However, if summer rain increases, C cycling will significantly accelerate but soil C stocks are not likely to be changed in the short-term. More studies involving modelling of long term C dynamics are needed to predict if the estimated increases in soil C input under wet conditions is going to be sustained and if labile C is being substituted to stable C, with a negative effect on long term soil C stocks.


2011 ◽  
Vol 8 (9) ◽  
pp. 2729-2739 ◽  
Author(s):  
M. F. Cotrufo ◽  
G. Alberti ◽  
I. Inglima ◽  
H. Marjanović ◽  
D. LeCain ◽  
...  

Abstract. Precipitation patterns are expected to change in the Mediterranean region within the next decades, with projected decreases in total rainfall and increases in extreme events. We manipulated precipitation patterns in a Mediterranean woodland, dominated by Arbutus unedo L., to study the effects of changing precipitation regimes on above-ground net primary production (ANPP) and soil C dynamics, specifically plant-derived C input to soil and soil respiration (SR). Experimental plots were exposed to either a 20 % reduction of throughfall or to water addition targeted at maintaining soil water content above a minimum of 10 % v/v. Treatments were compared to control plots which received ambient precipitation. Enhanced soil moisture during summer months highly stimulated annual stem primary production, litter fall, SR and net annual plant-derived C input to soil which on average increased by 130 %, 26 %, 58 % and 220 %, respectively, as compared to the control. In contrast, the 20 % reduction in throughfall (equivalent to 10 % reduction in precipitation) did not significantly change soil moisture at the site, and therefore did not significantly affect ANPP or SR. We conclude that minor changes (around 10 % reduction) in precipitation amount are not likely to significantly affect ANPP or soil C dynamics in Mediterranean woodlands. However, if summer rain increases, C cycling will significantly accelerate but soil C stocks are not likely to be changed in the short-term. More studies involving modelling of long-term C dynamics are needed to predict if the estimated increases in soil C input under wet conditions is going to be sustained and if labile C is being substituted to stable C, with a negative effect on long-term soil C stocks.


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