351 Novel Mutations Segregating in Three Congenital Heart Disease Families Identified by Exome Sequencing

2012 ◽  
Vol 28 (5) ◽  
pp. S229
Author(s):  
A. Manickaraj ◽  
O. Buske ◽  
M. Brudno ◽  
S. Mital
2020 ◽  
Vol 24 (23) ◽  
pp. 13751-13762
Author(s):  
Huan‐Xin Chen ◽  
Zi‐Yue Yang ◽  
Hai‐Tao Hou ◽  
Jun Wang ◽  
Xiu‐Li Wang ◽  
...  

2012 ◽  
Vol 16 (4) ◽  
pp. 306-309
Author(s):  
Lei Sun ◽  
Longfei Cheng ◽  
Hanquan Dong ◽  
Binbin Wang ◽  
Guoying Huang ◽  
...  

2017 ◽  
Vol 20 (6) ◽  
pp. 521-532 ◽  
Author(s):  
Yuejuan Xu ◽  
Tingting Li ◽  
Tian Pu ◽  
Ruixue Cao ◽  
Fei Long ◽  
...  

Congenital heart disease (CHD) is one of the most common birth defects. More than 200 susceptibility loci have been identified for CHDs, yet a large part of the genetic risk factors remain unexplained. Monozygotic (MZ) twins are thought to be completely genetically identical; however, discordant phenotypes have been found in MZ twins. Recent studies have demonstrated genetic differences between MZ twins. We aimed to test whether copy number variants (CNVs) and/or genetic mutation differences play a role in the etiology of CHDs by using single nucleotide polymorphism (SNP) genotyping arrays and whole exome sequencing of twin pairs discordant for CHDs. Our goal was to identify mutations present only in the affected twins, which could identify novel candidates for CHD susceptibility loci. We present a comprehensive analysis for the CNVs and genetic mutation results of the selected individuals but detected no consistent differences within the twin pairs. Our study confirms that chromosomal structure or genetic mutation differences do not seem to play a role in the MZ twins discordant for CHD.


PLoS Genetics ◽  
2016 ◽  
Vol 12 (10) ◽  
pp. e1006335 ◽  
Author(s):  
Christoph Preuss ◽  
Melanie Capredon ◽  
Florian Wünnemann ◽  
Philippe Chetaille ◽  
Andrea Prince ◽  
...  

2019 ◽  
Vol 64 (5) ◽  
pp. 427-435 ◽  
Author(s):  
Meng-Jiao Zhu ◽  
Xiao-Yun Ma ◽  
Pei-Cheng Ding ◽  
Han-Fei Tang ◽  
Rui Peng ◽  
...  

2021 ◽  
Vol 14 (1) ◽  
Author(s):  
Ekanem N. Ekure ◽  
Adebowale Adeyemo ◽  
Hanhan Liu ◽  
Ogochukwu Sokunbi ◽  
Nnenna Kalu ◽  
...  

Background: Congenital heart disease (CHD) is the most common birth defect and affects roughly 1% of the global population. There have been many large CHD sequencing projects in developing countries but none in sub-Saharan Africa. In this exome sequencing study, we recruited families from Lagos, Nigeria, affected by structural heart disease. Methods: Ninety-eight participants with CHD and an average age of 3.6 years were recruited from Lagos, Nigeria. Exome sequencing was performed on probands and parents when available. For genes of high interest, we conducted functional studies in Drosophila using a cardiac-specific RNA interference–based gene silencing system. Results: The 3 most common CHDs were tetralogy of Fallot (20%), isolated ventricular septal defect (14%), and transposition of the great arteries (8%). Ten percent of the cohort had pathogenic or likely pathogenic variants in genes known to cause CHD. In 64 complete trios, we found 34 de novo variants that were not present in the African population in the Genome Aggregation Database (v3). Nineteen loss of function variants were identified using the genome-wide distribution of selection effects for heterozygous protein-truncating variants (s het ). Nine genes caused a significant mortality when silenced in the Drosophila heart, including 4 novel disease genes not previously associated with CHD ( UBB, EIF4G3, SREBF1 , and METTL23 ). Conclusions: This study identifies novel candidate genes and variants for CHD and facilitates comparisons with previous CHD sequencing studies in predominantly European cohorts. The study represents an important first step in genomic studies of CHD in understudied populations. Registration: URL: https://www.clinicaltrials.gov ; Unique identifier: NCT01952171.


Sign in / Sign up

Export Citation Format

Share Document