scholarly journals Transcriptome assembly and abiotic related gene expression analysis of date palm reveal candidate genes involved in response to cadmium stress

2019 ◽  
Vol 225 ◽  
pp. 108569 ◽  
Author(s):  
Imen Rekik ◽  
Zayneb Chaâbene ◽  
Walid Kriaa ◽  
Agnieszka Rorat ◽  
Vandenbulcke Franck ◽  
...  
Keyword(s):  
Gene Expression ◽  
Candidate Genes ◽  
Expression Analysis ◽  
Gene Expression Analysis ◽  
Date Palm ◽  
Transcriptome Assembly ◽  
Cadmium Stress ◽  
Related Gene

scholarly journals Validation of Internal Control Genes for Quantitative Real-Time PCR Gene Expression Analysis in Morchella

Molecules ◽  
2018 ◽  
Vol 23 (9) ◽  
pp. 2331 ◽  
Author(s):  
Qianqian Zhang ◽  
Wei Liu ◽  
Yingli Cai ◽  
A-Feng Lan ◽  
Yinbing Bian
Keyword(s):  
Gene Expression ◽  
Candidate Genes ◽  
Expression Analysis ◽  
Internal Control ◽  
Reference Genes ◽  
Gene Expression Analysis ◽  
Stable Gene ◽  
Experimental Conditions ◽  
The Stability ◽  
Vacuolar Protein

The reliability of qRT-PCR results depend on the stability of reference genes used for normalization, suggesting the necessity of identification of reference genes before gene expression analysis. Morels are edible mushrooms well-known across the world and highly prized by many culinary kitchens. Here, several candidate genes were selected and designed according to the Morchella importuna transcriptome data. The stability of the candidate genes was evaluated with geNorm and NormFinder under three different experimental conditions, and several genes with excellent stability were selected. The extensive adaptability of the selected genes was tested in ten Morchella species. Results from the three experimental conditions revealed that ACT1 and INTF7 were the most prominent genes in Morchella, CYC3 was the most stable gene in different development stages, INTF4/AEF3 were the top-ranked genes across carbon sources, while INTF3/CYC3 pair showed the robust stability for temperature stress treatment. We suggest using ACT1, AEF3, CYC3, INTF3, INTF4 and INTF7 as reference genes for gene expression analysis studies for any of the 10 Morchella strains tested in this study. The stability and practicality of the gene, vacuolar protein sorting (INTF3), vacuolar ATP synthase (INTF4) and14-3-3 protein (INTF7) involving the basic biological processes were validated for the first time as the candidate reference genes for quantitative PCR. Furthermore, the stability of the reference genes was found to vary under the three different experimental conditions, indicating the importance of identifying specific reference genes for particular conditions.

CIP elicitors on the defense response of A. macrocephala and its related gene expression analysis

2020 ◽  
Vol 245 ◽  
pp. 153107
Author(s):  
Peifeng Zhang ◽  
Fang Zheng ◽  
Lei Chen ◽  
Xiaofang Lu ◽  
Wei Tian
Keyword(s):  
Gene Expression ◽  
Expression Analysis ◽  
Defense Response ◽  
Gene Expression Analysis ◽  
Related Gene

Longitudinal gene expression analysis of candidate genes in coeliac disease

2015 ◽  
Vol 47 ◽  
pp. e275-e276
Author(s):  
M. Galatola ◽  
C. Panico ◽  
D. Cielo ◽  
L. Carbone ◽  
R. Auricchio ◽  
...  
Keyword(s):  
Gene Expression ◽  
Coeliac Disease ◽  
Candidate Genes ◽  
Expression Analysis ◽  
Gene Expression Analysis

A search for candidate genes for lipodystrophy, obesity and diabetes via gene expression analysis of A-ZIP/F-1 mice

Genomics ◽  
2003 ◽  
Vol 81 (4) ◽  
pp. 378-390 ◽  
Author(s):  
Alain A Mir ◽  
Maxim V Myakishev ◽  
Oksana O Polesskaya ◽  
Jaideep Moitra ◽  
David Petersen ◽  
...  
Keyword(s):  
Gene Expression ◽  
Candidate Genes ◽  
Expression Analysis ◽  
Gene Expression Analysis ◽  
Obesity And Diabetes

scholarly journals Plant defense-related gene expression analysis of canker-infected lime seedling

2020 ◽  
Vol 432 ◽  
pp. 012007
Author(s):  
N Sudyoung ◽  
S Tokuyama ◽  
S Krajangsang ◽  
O Pringsulaka ◽  
P Yeesin ◽  
...  
Keyword(s):  
Gene Expression ◽  
Plant Defense ◽  
Expression Analysis ◽  
Gene Expression Analysis ◽  
Related Gene ◽  
Defense Related Gene
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