Global Optimization in Protein Folding

Semi-deterministic and genetic algorithms for global optimization of microfluidic protein-folding devices

International Journal for Numerical Methods in Engineering ◽

10.1002/nme.1562 ◽

2006 ◽

Vol 66 (2) ◽

pp. 319-333 ◽

Cited By ~ 24

Author(s):

Benjamin Ivorra ◽

David E. Hertzog ◽

Bijan Mohammadi ◽

Juan G. Santiago

Keyword(s):

Genetic Algorithms ◽

Protein Folding ◽

Global Optimization

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Global Optimization in Protein Folding

Encyclopedia of Optimization ◽

10.1007/978-0-387-74759-0_246 ◽

2008 ◽

pp. 1392-1411

Author(s):

Daniel R. Ripoll ◽

Adam Liwo ◽

Harold A. Scheraga

Keyword(s):

Protein Folding ◽

Global Optimization

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Global optimization methods for protein folding problems

Global Minimization of Nonconvex Energy Functions: Molecular Conformation and Protein Folding - DIMACS Series in Discrete Mathematics and Theoretical Computer Science ◽

10.1090/dimacs/023/03 ◽

1995 ◽

pp. 29-39 ◽

Cited By ~ 2

Author(s):

Richard Byrd ◽

Elizabeth Eskow ◽

Andre Van der Hoek ◽

Robert Schnabel ◽

Chung-Shang Shao ◽

...

Keyword(s):

Protein Folding ◽

Global Optimization ◽

Optimization Methods ◽

Global Optimization Methods

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Global optimization approaches in protein folding and peptide docking

DIMACS Series in Discrete Mathematics and Theoretical Computer Science - Mathematical Support for Molecular Biology ◽

10.1090/dimacs/047/07 ◽

1999 ◽

pp. 141-171 ◽

Cited By ~ 33

Author(s):

C. Floudas ◽

J. Klepeis ◽

P. Pardalos

Keyword(s):

Protein Folding ◽

Global Optimization ◽

Peptide Docking

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The protein folding problem: global optimization of force fields

Frontiers in Bioscience ◽

10.2741/1482 ◽

2004 ◽

Vol 9 (1-3) ◽

pp. 3296 ◽

Cited By ~ 26

Author(s):

H., A. Scheraga

Keyword(s):

Protein Folding ◽

Global Optimization ◽

Force Fields

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Multiple minima problem in protein folding: αBB global optimization approach αBB Algorithm

Encyclopedia of Optimization ◽

10.1007/0-306-48332-7_1 ◽

2006 ◽

pp. 1-12

Author(s):

Claire S. Adjiman ◽

Christodoulos A. Floudas

Keyword(s):

Protein Folding ◽

Global Optimization ◽

Optimization Approach ◽

Multiple Minima

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Protein folding and peptide docking: A molecular modeling and global optimization approach

Computers & Chemical Engineering ◽

10.1016/s0098-1354(98)00032-5 ◽

1998 ◽

Vol 22 ◽

pp. S3-S10 ◽

Cited By ~ 9

Author(s):

J.L. Klepeis ◽

M.G. Ierapetritou ◽

C.A. Floudas

Keyword(s):

Protein Folding ◽

Global Optimization ◽

Molecular Modeling ◽

Optimization Approach ◽

Peptide Docking

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Global Optimization in Protein Folding

Encyclopedia of Optimization ◽

10.1007/0-306-48332-7_176 ◽

2006 ◽

pp. 850-865

Author(s):

Daniel R. Ripoll ◽

Harold A. Scheraga

Keyword(s):

Protein Folding ◽

Global Optimization

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Multiple Minima Problem in Protein Folding: αBB Global Optimization Approach

Encyclopedia of Optimization ◽

10.1007/0-306-48332-7_325 ◽

2006 ◽

pp. 1644-1651 ◽

Cited By ~ 1

Author(s):

John L. Klepeis ◽

Christodoulos A. Floudas

Keyword(s):

Protein Folding ◽

Global Optimization ◽

Optimization Approach ◽

Multiple Minima

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Deterministic Global Optimization and Ab Initio Approaches for the Structure Prediction of Polypeptides, Dynamics of Protein Folding, and Protein-Protein Interactions

Computational Methods for Protein Folding - Advances in Chemical Physics ◽

10.1002/0471224421.ch7 ◽

2002 ◽

pp. 265-457 ◽

Cited By ~ 4

Author(s):

John L. Klepeis ◽

Heather D. Schafroth ◽

Karl M. Westerberg ◽

Christodoulos A. Floudas

Keyword(s):

Protein Folding ◽

Global Optimization ◽

Ab Initio ◽

Protein Interactions ◽

Structure Prediction ◽

Deterministic Global Optimization ◽

Protein Protein Interactions

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