Multivariate Generalization of the Hypergeometric Function Type I Distribution

2008 ◽  
Vol 105 (1) ◽  
pp. 111-122 ◽  
Author(s):  
Daya K. Nagar ◽  
Paula Andrea Bran-Cardona ◽  
Arjun K. Gupta
2021 ◽  
Vol 49 (1) ◽  
pp. 118-127
Author(s):  
Natalia Egri ◽  
Ana Esteve-Solé ◽  
Àngela Deyà-Martínez ◽  
Iñaki Ortiz de Landazuri ◽  
Alexandru Vlagea ◽  
...  

Chronic mucocutaneous candidiasis (CMC) is characterized by a chronic or recurrent non invasive infection, mainly due to Candida albicans , in skin, nails, and mucous membranes, associated in some cases with autoimmune manifestations. The key immune defect is disruption of the action of cytokine IL-17, whose most common genetic etiology is STAT1 gene gain-of function (GOF) mutations. The initial appropriate treatment for fungal infections is with azoles. However, frequent occurrence of drug resistance is the main limitation. Therefore, identification of the underlying inborn error if immunity in CMC may allow widening therapeutic options aimed at restoring immunological function. Type I and II Janus Kinase -inhibitors have been shown to control CMC in cases associated with STAT1 GOF. In this review, we delve into the pathogenesis of CMC and the underlying immune mechanisms. We describe the reported genetic defects in which CMC is the main manifestation. Diagnostic and therapeutic approaches for these patients are also offered.


2013 ◽  
Vol 56 (2) ◽  
pp. 73-79
Author(s):  
Lenka Bittnerová ◽  
Alena Jiroutová ◽  
Emil Rudolf ◽  
Martina Řezáčová ◽  
Jiří Kanta

Activated hepatic stellate cells (HSC) are a major source of fibrous proteins in cirrhotic liver. Inducing or accelerating their apoptosis is a potential way of liver fibrosis treatment. Extracellular matrix (ECM) surrounding cells in tissue affects their differentiation, migration, proliferation and function. Type I collagen is the main ECM component in fibrotic liver. We have examined how this protein modifies apoptosis of normal rat HSC induced by gliotoxin, cycloheximide and cytochalasin D in vitro and spontaneous apoptosis of HSC isolated from CCl4-damaged liver. We have found that type I collagen gel enhances HSC apoptosis regardless of the agent triggering this process.


2016 ◽  
Vol 138 (12) ◽  
Author(s):  
Zhonglai Wang ◽  
Xiaoqiang Zhang ◽  
Hong-Zhong Huang ◽  
Zissimos P. Mourelatos

The failure rate of dynamic systems with random parameters is time-varying even for linear systems excited by a stationary random input. In this paper, we propose a simulation-based method to estimate two types (type I and type II) of time-varying failure rate of dynamic systems. The input stochastic processes are discretized in time and the trajectories of the output stochastic process are calculated. The time of interest is partitioned into a series of time intervals and the saddlepoint approximation (SPA) is employed to estimate the probability of failure in each interval. Type I follows the commonly used definition of failure rate. It is estimated at discrete time intervals using SPA and the correlation information from a properly selected time-dependent copula function. Type II is a proposed new concept of time-varying failure rate. It provides a way to predict the failure rate considering a virtual “good-as-old” repair action of repairable dynamic systems. The effectiveness of the proposed method is illustrated with a vehicle vibration example.


2008 ◽  
Vol 2008 ◽  
pp. 1-13
Author(s):  
Daya K. Nagar ◽  
Fabio Humberto Sepúlveda-Murillo

The confluent hypergeometric function kind 1 distribution with the probability density function (pdf) proportional tox_−1F11(α;β;−x),  x>0occurs as the distribution of the ratio of independent gamma and beta variables. In this article, a multivariate generalization of this distribution is defined and derived. Several pertinent properties of this multivariate distribution are discussed that shed some light on the nature of the distribution.


2016 ◽  
Author(s):  
Piaopiao Chen ◽  
Dandan Wang ◽  
Han Chen ◽  
Zhenzhen Zhou ◽  
Xionglei He

Essential genes refer to those whose null mutation leads to lethality or sterility. We propose that the fatal effect of inactivating an essential gene can be attributed to either the loss of indispensable core cellular function (type I), or the gain of fatal side effects after losing dispensable periphery function (type II). In principle, inactivation of the type I essential genes can be rescued only by re-gain of the core functions, whereas inactivation of the type II essential genes could be rescued by a further loss of function of another gene to eliminate the otherwise fatal side effects. Because such loss-of-function rescuing mutations may occur spontaneously, type II essential genes may become non-essential in a few individuals of a large population. We tested this idea in the yeastSacchromyces cerevisiae. Large-scale whole genome sequencing of such essentiality-reversing mutants reveals 14 cases where inactivation of an essential gene is rescued by loss-of-function mutations on another gene. In particular, the essential gene encoding the enzyme adenylosuccinate lyase (ADSL) is shown to be type II, suggesting a loss-of-function therapeutic strategy for the human disorder ADSL deficiency. A proof-of-principle test of this strategy in the nematodeCaenorhabditis elegansshows promising results.


Blood ◽  
2005 ◽  
Vol 106 (11) ◽  
pp. 4944-4944
Author(s):  
Monia Marchetti ◽  
Carlo Aprile ◽  
Carla Greco ◽  
Giovanni Barosi

Abstract BACKGROUND: Myelofibrosis with myeloid metaplasia (MMM) is a rare chronic myeloproliferative disease characterized by both myeloproliferative and myelodepletive features: myeloproliferation typically includes enhanced spontaneous mobilization of hematopoietic progenitor cells (HPC) from the bone marrow (BM) and their homing into extramedullary sites (mainly spleen); myelodepletion results from exhaustion of both BM and extramedullary hemopoiesis. AIMS: To investigate the extent and distribution of hematopoiesis in MMM patients and to capture its relationship with BM fibrosis, HPC mobilization and clinical severity. METHODS: Immunoscintigraphy employing a dual-head camera was performed 120–260 minutes (median 180 minutes) after administration of 553–830 MBq (median 700 MBq) 99mTc-BW250/183, corresponding to 0.3–0.5 mg. Hematopoietic function in the central compartment (sacrum) was described by “subtypes” (normal, increased or decreased) and by the sacrum-to-soft tissue uptake ratio (UR) (Huic at el, J Nucl Med 1997). The degree of peripheral BM displacement (limbs) was described through 5 “types” (I to V) (Huic at el, J Nucl Med 1997). RESULTS: Twenty-three MMM patients (13 males, median age 55 years) were studied. Eleven patients showed a reduced uptake by the central BM compartment: they had a higher WHO fibrosis grade (p=0.008), lower hemoglobin values (p=0.012) and lower platelet counts (p=0.007) than patients with a preserved central compartment. Patients with an exhausted central compartment at immunoscintigraphy also showed a significantly higher mobilization of HPC into peripheral blood, as documented by higher values of the following parameters: CD34+ count (0.86% vs 0.12%; p=0.029), immature myeloid cells or blasts (9.5% versus 0.3%; p=0.005), spleen size (9.3 vs 2.4 centimeters from costal arc; p=0.007). Among the patients with a depressed central compartment, those who also lost peripheral BM function (type V) showed a more severe myelodepletion and more intense HPC mobilization. On the opposite side, among the 12 patients with a preserved central compartment, the 8 ones with a mild peripheral BM displacement (type I–II) showed absent or mild fibrosis (WHO 0-1), elevated platelet counts, normal to high hemoglobin values, minimally enlarged spleens and no hints of increased HPC mobilization (CD34+ <0.1%; no blasts; <=1% immature myeloid cells). From these data it appears that progressive fibrosis and exhaustion of central BM is accompanied by a gradual displacement of hemopoiesis into the peripheral bone compartment and the spleen and by derangement of HPC trafficking. CONCLUSIONS: BM immunoscintigraphy accurately tracks MMM clinical features and may help staging MMM patients, understanding MMM biology and targeting therapies Clinical and immunoscintigraphy parameters (means and ANOVA p values) Type I-III II–IV V p § Barosi et al, Leuk Lymph 2002 Subtype not reduced reduced reduced UR 9.39 2.53 1.22 0.041 Fibrosis (grade) 1.0 2.0 2.7 0.001 Hb (g/dl) 13.5 11.1 9.6 0.023 PLT *10(9) 613 283 86 0.04 WBC *10(9) 8.9 6.2 6.9 0.059 Spleen (cm) 1.9 7.6 10.5 0.011 Immature myeloid cells (%) 0.3 3.6 9.7 0.0005 Blast cells (%) 0.0 0.2 3.8 0.048 CD34+ cells (%/μl) 0.1 / 6.4 0.4 / 22.1 1.3 / 155.5 0.009 / 0.12 LDH (UI/l) 566 956 1381 0.014 Severity Score§ 2.4 3.0 3.8 0.036 Disease duration (mo) 43 30 74 0.45


PeerJ ◽  
2018 ◽  
Vol 6 ◽  
pp. e4641
Author(s):  
Sherri L. Christian ◽  
Nikitha K. Pallegar ◽  
Robert J. Brown ◽  
Alicia M. Viloria-Petit

BackgroundWhite adipose tissue (WAT) is essential for energy storage as well as being an active endocrine organ. The secretion of adipokines by adipocytes can affect whole body metabolism, appetite, and contribute to overall health. WAT is comprised of lipid-laden mature adipocytes, as well as immune cells, endothelial cells, pre-adipocytes, and adipose-derived stem cells. In addition, the presence of extracellular matrix (ECM) proteins in WAT can actively influence adipocyte differentiation, growth, and function. Type I collagen is an abundant fibrous ECM protein in WAT that is secreted by developing adipocytes. However, the extent and overall effect of Type I collagen on adipokine secretion in mature adipocytes when added exogenously has not been established.MethodsWe characterized the effects of Type I collagen overlays prepared using two different buffers on adipocyte physiology and function when added at different times during differentiation. In addition, we compared the effect of collagen overlays when adipocytes were cultured on two different tissue culture plastics that have different adherent capabilities. Triglyceride accumulation was analyzed to measure adipocyte physiology, and leptin and adiponectin secretion was determined to analyze effects on adipokine secretion.ResultsWe found that collagen overlays, particularly when added during the early differentiation stage, impaired adipokine secretion from mature adipocytes. Collagen prepared using PBS had a greater suppression of leptin than adiponectin while collagen prepared using HANKS buffer suppressed the secretion of both adipokines. The use of CellBind plates further suppressed leptin secretion. Triglyceride accumulation was not substantially impacted with any of the collagen overlays.DiscussionAdipokine secretion can be selectively altered by collagen overlays. Thus, it is feasible to selectively manipulate the secretion of adipokines by adipocytesin vitroby altering the composition or timing of collagen overlays. The use of this technique could be applied to studies of adipokine function and secretionin vitroas well as having potential therapeutic implications to specifically alter adipocyte functionalityin vivo.


2000 ◽  
Vol 84 (2) ◽  
pp. 185-194 ◽  
Author(s):  
P. White ◽  
D. Cattaneo ◽  
M. J. Dauncey

Development of muscle is critically dependent on several hormones which in turn are regulated by nutritional status. We therefore determined the impact of mild postnatal undernutrition on key markers of myofibre function: type I slow myosin heavy chain (MyHC) isoform, myosin ATPase, succinate dehydrogenase and α-glycerophosphate dehydrogenase. In situ hybridization, immunocytochemistry and enzyme histochemistry were used to assess functionally distinct muscles from 6-week-old pigs which had been fed an optimal (6 % (60 g food/kg body weight per d)) or low (2 % (20 g food/kg per d)) intake for 3 weeks, and kept at 26°C. Nutritional status had striking muscle-specific influences on contractile and metabolic properties of myofibres, and especially on myosin isoform expression. A low food intake upregulated slow MyHC mRNA and protein levels in rhomboideus by 53 % (P < 0·01) and 18 % (P < 0·05) respectively; effects in longissimus dorsi, soleus and diaphragm were not significant. The oxidative capacity of all muscles increased on the low intake, albeit to varying extents: longissimus dorsi (55 %), rhomboideus (30 %), soleus (21 %), diaphragm (7 %). Proportions of slow oxidative fibres increased at the expense of fast glycolytic fibres. These novel findings suggest a critical role for postnatal nutrition in regulating myosin gene expression and muscle phenotype. They have important implications for optimal development of human infants: on a low intake, energetic efficiency will increase and the integrated response to many metabolic and growth hormones will alter, since both are dependent on myofibre type. Mechanisms underlying these changes probably involve complex interactions between hormones acting as nutritional signals and differential effects on their cell membrane receptors or nuclear receptors.


2018 ◽  
Author(s):  
Sherri Lynn Christian ◽  
Nikitha K Pallegar ◽  
Robert J Brown ◽  
Alicia M Viloria-Petit

Background. White adipose tissue (WAT) is essential for energy storage as well as being an active endocrine organ. The secretion of adipokines by adipocytes can affect whole body metabolism, appetite, and contribute to overall health. WAT is comprised of lipid-laden mature adipocytes, as well as immune cells, endothelial cells, pre-adipocytes, and adipose-derived stem cells. In addition, the presence of extracellular matrix (ECM) proteins in WAT can actively influence adipocyte differentiation, growth, and function. Type I collagen is an abundant fibrous ECM protein in WAT that is secreted by developing adipocytes. However, the extent and overall effect of Type I collagen on adipokine secretion in mature adipocytes when added exogenously has not been established. Methods. We characterized the effects of Type I collagen overlays prepared using two different buffers on adipocyte physiology and function when added at different times during differentiation. In addition, we compared the effect of collagen overlays when adipocytes were cultured on two different tissue culture plastics that have different adherent capabilities. Triglyceride accumulation was analyzed to measure adipocyte physiology, and leptin and adiponectin secretion was determined to analyze effects on adipokine secretion. Results. We found that collagen overlays, particularly when added during the early differentiation stage, impaired adipokine secretion from mature adipocytes. Collagen prepared using PBS had a greater suppression of leptin than adiponectin while collagen prepared using HANKS buffer suppressed the secretion of both adipokines. The use of CellBind plates further suppressed leptin secretion. Triglyceride accumulation was minimally impacted with any of the collagen overlays. Discussion. Adipokine secretion can be selectively altered by collagen overlays. Thus, it is feasible to selectively manipulate the secretion of adipokines by adipocytes in vitro by altering the composition or timing of collagen overlays. The use of this technique could be applied to studies of adipokine function and secretion in vitro as well as having potential therapeutic implications to specifically alter adipocyte functionality in vivo.


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