Suppression of a +1 T mutation by a nearby substitution in the mitochondrial cox1 gene of Chlamydomonas reinhardtii : a new type of frameshift suppression in an organelle genome

1998 ◽  
Vol 259 (3) ◽  
pp. 294-298 ◽  
Author(s):  
C. Remacle ◽  
M. Colin ◽  
R. F. Matagne
Keyword(s):  
Chlamydomonas Reinhardtii ◽  
Cox1 Gene ◽  
Organelle Genome ◽  
Mitochondrial Cox1 ◽  
Frameshift Suppression ◽  
New Type

scholarly journals Rare, deep-water and similar: revision of Sibogasyrinx (Conoidea: Cochlespiridae)

2021 ◽  
Vol 773 ◽  
pp. 19-60
Author(s):  
Yuri I. Kantor ◽  
Nicolas Puillandre
Keyword(s):  
Phylogenetic Analysis ◽  
New Species ◽  
Deep Water ◽  
Morphological Characters ◽  
Molecular Phylogenetic Analysis ◽  
Cox1 Gene ◽  
Mitochondrial Cox1 ◽  
Molecular Phylogenetic ◽  
Northern Pacific

The genus Sibogasyrinx has to date included only four species of rare deep-water Conoidea, each known from few specimens. In shell characters it strongly resembles three distantly-related genera, two of which, Comitas and Leucosyrinx, belong to a different family, the Pseudomelatomidae. A molecular phylogenetic analysis of a large amount of material of Conoidea has revealed the existence of much additional undescribed diversity within Sibogasyrinx from the central Indo-Pacific and temperate Northern Pacific. Based on partial sequences of the mitochondrial cox1 gene and morphological characters of 54 specimens, 10 species hypotheses are proposed, of which six are described as new species: S. subula sp. nov., S. lolae sp. nov., S. maximei sp. nov., S. clausura sp. nov., S. pagodiformis sp. nov. and S. elbakyanae Kantor, Puillandre & Bouchet sp. nov. One of the previously described species was absent in our material. Most of the new species are very similar and are compared to Leucosyrinx spp. Species of Sibogasyrinx are unique among Conoidea on account of the high intrageneric variability in radular morphology. Three distinct radula types are found within Sibogasyrinx, two of which are confined to highly supported subclades.

scholarly journals Characterization of thioredoxin y , a new type of thioredoxin identified in the genome of Chlamydomonas reinhardtii

FEBS Letters ◽  
2003 ◽  
Vol 543 (1-3) ◽  
pp. 87-92 ◽  
Author(s):  
S.D. Lemaire ◽  
V. Collin ◽  
E. Keryer ◽  
A. Quesada ◽  
M. Miginiac-Maslow
Keyword(s):  
Chlamydomonas Reinhardtii ◽  
New Type

Two intron sequences in yeast mitochondrial COX1 gene: Homology among URF-containing introns and strain-dependent variation in flanking exons

Cell ◽  
1983 ◽  
Vol 32 (2) ◽  
pp. 379-389 ◽  
Author(s):  
Lambert A.M. Hensgens ◽  
Linda Bonen ◽  
Muus de Haan ◽  
Gerda van der Horst ◽  
Leslie A. Grivell
Keyword(s):  
Cox1 Gene ◽  
Mitochondrial Cox1 ◽  
Gene Homology ◽  
Strain Dependent

scholarly journals Genotyping of Echinococcus granulosus isolates from livestock based on mitochondrial cox1 gene, in the Markazi province, Iran

2019 ◽  
Vol 43 (4) ◽  
pp. 592-596 ◽  
Author(s):  
Behnam Abedi ◽  
Amir Hossein Maghsood ◽  
Behzad Khansarinejad ◽  
Mohammad Fallah ◽  
Mohammad Matini ◽  
...  
Keyword(s):  
Echinococcus Granulosus ◽  
Cox1 Gene ◽  
Mitochondrial Cox1

11. Sequencing the Limulus mitochondrial COX1 gene: Comparison of SNPs to those causing human disease

Mitochondrion ◽  
2009 ◽  
Vol 9 (1) ◽  
pp. 64
Author(s):  
Francesca A. Carlisle ◽  
Meghan C. Crosby ◽  
Nicole A. DeLauro ◽  
Kelley E. Durham ◽  
Alessandra Fiallos ◽  
...  
Keyword(s):  
Human Disease ◽  
Cox1 Gene ◽  
Mitochondrial Cox1 ◽  
Gene Comparison

Pseudo-nitzschia species (Bacillariophyceae) identification and delineation using mitochondrial cox1 gene sequences as compared to LSU rDNA

2015 ◽  
Vol 81 (5) ◽  
pp. 831-838 ◽  
Author(s):  
Suh Nih Tan ◽  
Hong Chang Lim ◽  
Sing Tung Teng ◽  
Po Teen Lim ◽  
Chui Pin Leaw
Keyword(s):  
Lsu Rdna ◽  
Cox1 Gene ◽  
Gene Sequences ◽  
Mitochondrial Cox1

scholarly journals REM1, a New Type of Long Terminal Repeat Retrotransposon in Chlamydomonas reinhardtii

2005 ◽  
Vol 25 (23) ◽  
pp. 10628-10638 ◽  
Author(s):  
Mónica Pérez-Alegre ◽  
Alain Dubus ◽  
Emilio Fernández
Keyword(s):  
Long Terminal Repeat ◽  
Chlamydomonas Reinhardtii ◽  
Copy Number ◽  
Structural Features ◽  
Terminal Repeat ◽  
Phd Finger ◽  
Transpositional Activity ◽  
Regulatory Module ◽  
New Type ◽  
Foreign Dna Integration

ABSTRACT A new long terminal repeat (LTR) retrotransposon, named REM1, has been identified in the green alga Chlamydomonas reinhardtii. It was found in low copy number, highly methylated, and with an inducible transpositional activity. This retrotransposon is phylogenetically related to Ty3-gypsy LTR retrotransposons and possesses new and unusual structural features. A regulatory module, ORF3p, is present in an inverse transcriptional orientation to that of the polyprotein and contains PHD-finger and chromodomains, which might confer specificity of the target site and are highly conserved in proteins involved in transcriptional regulation by chromatin remodeling. By using different wild-type and mutant strains, we show that CrREM1 was active with a strong transcriptional activity and amplified its copy number in strains that underwent foreign DNA integration and/or genetic crosses. However, integration of CrREM1 was restricted to these events even though the expression of its full-length transcripts remained highly activated. A regulatory mechanism of CrREM1 retrotransposition which would help to minimize its deleterious effects in the host genome is proposed.

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