Comparative analysis of 82 expressed sequence tags from a cattle ovary cDNA library

1998 ◽  
Vol 9 (7) ◽  
pp. 545-549 ◽  
Author(s):  
R.Z. Ma ◽  
M.J.T. van Eijk ◽  
J.E. Beever ◽  
G. Guérin ◽  
C.L. Mummery ◽  
...  
Keyword(s):  
Comparative Analysis ◽  
Cdna Library ◽  
Expressed Sequence Tags ◽  
Expressed Sequence

scholarly journals Generation and Analysis of Expressed Sequence Tags (ESTs) from Muscle Full-Length cDNA Library of Wujin Pig

2014 ◽  
Vol 13 (2) ◽  
pp. 378-386
Author(s):  
Su-mei ZHAO ◽  
Yong-gang LIU ◽  
Hong-bing PAN ◽  
Xi ZHANG ◽  
Chang-rong GE ◽  
...  
Keyword(s):  
Cdna Library ◽  
Expressed Sequence Tags ◽  
Full Length ◽  
Full Length Cdna ◽  
Expressed Sequence

Analysis of 2,297 expressed sequence tags (ESTs) from a cDNA library of flax (Linum ustitatissimum L.) bark tissue

2012 ◽  
Vol 39 (5) ◽  
pp. 6289-6296 ◽  
Author(s):  
Song-Hua Long ◽  
Xin Deng ◽  
Yu-Fu Wang ◽  
Xiang Li ◽  
Rui-Qing Qiao ◽  
...  
Keyword(s):  
Cdna Library ◽  
Expressed Sequence Tags ◽  
Bark Tissue ◽  
Expressed Sequence

Comparative analysis and characterization of expressed sequence tags in gilthead sea bream (Sparus aurata) liver and embryos

Aquaculture ◽  
2005 ◽  
Vol 243 (1-4) ◽  
pp. 69-81 ◽  
Author(s):  
Elena Sarropoulou ◽  
Deborah Mary Power ◽  
Antonios Magoulas ◽  
Robert Geisler ◽  
Georgios Kotoulas
Keyword(s):  
Comparative Analysis ◽  
Expressed Sequence Tags ◽  
Sparus Aurata ◽  
Gilthead Sea Bream ◽  
Sea Bream ◽  
Expressed Sequence

Characterization of intronic structures and alternative splicing in Phytophthora sojae by comparative analysis of expressed sequence tags and genomic sequences

2011 ◽  
Vol 57 (2) ◽  
pp. 84-90 ◽  
Author(s):  
Danyu Shen ◽  
Wenwu Ye ◽  
Suomeng Dong ◽  
Yuanchao Wang ◽  
Daolong Dou
Keyword(s):  
Comparative Analysis ◽  
Alternative Splicing ◽  
Expressed Sequence Tags ◽  
Phytophthora Sojae ◽  
Genomic Sequences ◽  
Splice Sites ◽  
Distinct Phylogenetic Lineage ◽  
Expressed Sequence ◽  
Complete Genomic

The oomycetes, a distinct phylogenetic lineage of fungus-like microorganisms, are heterokonts (stramenopiles) belonging to the supergroup Chromalveolata. Although the complete genomic sequences of a number of oomycetes have been reported, little information regarding the introns therein is available. Here, we investigated the introns of Phytophthora sojae , a pathogen that causes soybean root and stem rot, by a comparative analysis of genomic sequences and expressed sequence tags. A total of 4013 introns were identified, of which 96.6% contained canonical splice sites. The P. sojae genome possessed features distinct from other organisms at 5′ splice sites, polypyrimidine tracts, branch sites, and 3′ splice sites. Diverse repeating sequences, ranging from 2 to 10 nucleotides in length, were found at more than half of the intron–exon boundaries. Furthermore, 122 genes underwent alternative splicing. These data indicate that P. sojae has unique splicing mechanisms, and recognition of those mechanisms may lead to more accurate predictions of the location of introns in P. sojae and even other oomycete species.

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