Quantum-chemical calculations of transition states and activation energies of molecular 1,2-elimination (1,2-addition) of HNO2

1980 ◽  
Vol 29 (10) ◽  
pp. 1540-1545
Author(s):  
V. I. Faustov ◽  
S. A. Shevelev ◽  
N. A. Anikin ◽  
S. S. Yufit ◽  
A. A. Fainzil'berg
Keyword(s):  
Quantum Chemical Calculations ◽  
Quantum Chemical ◽  
Transition States ◽  
Activation Energies

Methylamination of some 3,6-dinitro-1,8-naphthyridines with liquid methylamine – potassium permanganate

2000 ◽  
Vol 78 (7) ◽  
pp. 950-956
Author(s):  
Marian Wozniak ◽  
Maria Grzegozek ◽  
Piotr Surylo
Keyword(s):  
Quantum Chemical Calculations ◽  
Potassium Permanganate ◽  
Satisfactory Agreement ◽  
Quantum Chemical ◽  
Transition States ◽  
Molecular Orbitals ◽  
Heats Of Formation ◽  
Convenient Synthesis

3,6-Dinitro-1,8-naphthyridine and its 2-substituted derivatives are dehydro-methylaminated with the solution of potassium permanganate in liquid methylamine (LMA–PP) to the corresponding mono- or mono- and bis(methylamino)-3,6-dinitro-1,8-naphthyridines. In the case of 2-chloro- and 2-methoxy-3,6-dinitro-1,8-naphthyridine the replacement of chloro and methoxy substituents by the NHCH3 group occurs as well. Quantum-chemical calculations indicate the reactions to be controlled by the interaction of the frontal molecular orbitals (FMO) of the reagents. Moreover the heats of formation of intermediary methylamino-σ-adducts and transition states are calculated for the reaction studied. The calculations show satisfactory agreement between calculated and observed results. A convenient synthesis of some 2-substituted-3,6-dinitro-1,8-naphthyridines is reported.Key words: methylaminations, calculations PM3, nitro-1,8-naphthyridines, oxidation.

scholarly journals Combined Graph/relational Database Management System for Calculated Chemical Reaction Pathway Data

2020 ◽  
Author(s):  
Timur Gimadiev ◽  
Ramil Nugmanov ◽  
Dinar Batyrshin ◽  
Timur Madzhidov ◽  
Satoshi Maeda ◽  
...  
Keyword(s):  
Quantum Chemical Calculations ◽  
Chemical Reaction ◽  
Relational Database ◽  
Quantum Chemical ◽  
Reaction Pathway ◽  
Transition States ◽  
Structural Data ◽  
Database Management System ◽  
Pathway Data ◽  
Machine Learning Applications

Nowadays quantum chemical calculations are widely used to generate extensive datasets for machine learning applications, however, generally these sets only include information on equilibrium structures and some close conformers. Exploration of potential energy surface provides an important information on ground and transition states, but analysis of such data is complicated due to the number of possible reaction pathways. Here, we present RePathDB, a database system for managing 3D structural data for both ground and transition states resulted from quantum chemical calculations. Our tool allows to store, to assemble and to analyze reaction pathway data. It combines relational database CGR DB for handling compounds and reactions as molecular graphs with a graph database architecture for the pathway analysis by graph algorithms. Original Condensed Graph of Reaction Technology is used to store any chemical reaction as a single graph.

The correlations and quantum chemical interpretations of some molecular properties of several p-phenylenediamines and related compounds

1987 ◽  
Vol 52 (4) ◽  
pp. 819-829 ◽  
Author(s):  
Günter Grampp ◽  
Peter Pluschke
Keyword(s):  
Exchange Rates ◽  
Quantum Chemical Calculations ◽  
Quantum Chemical ◽  
Activation Energies ◽  
Molecular Properties ◽  
Ionization Potentials ◽  
Related Compounds ◽  
Good Agreement

Quantum chemical calculations of various p-phenylenediamines and related compounds are correlated with different molecular properties, such as electrochemical E1/2-values, ionization potentials, pK-values, UV-VIS spectra, the activation energies of the homogeneous electron self-exchange rates, and the synproportionation constants. All correlations are in good agreement with the predictions of simple HMO-theory.

scholarly journals Combined Graph/relational Database Management System for Calculated Chemical Reaction Pathway Data

2020 ◽  
Author(s):  
Timur Gimadiev ◽  
Ramil Nugmanov ◽  
Dinar Batyrshin ◽  
Timur Madzhidov ◽  
Satoshi Maeda ◽  
...  
Keyword(s):  
Quantum Chemical Calculations ◽  
Chemical Reaction ◽  
Relational Database ◽  
Quantum Chemical ◽  
Reaction Pathway ◽  
Transition States ◽  
Structural Data ◽  
Database Management System ◽  
Pathway Data ◽  
Machine Learning Applications

Nowadays quantum chemical calculations are widely used to generate extensive datasets for machine learning applications, however, generally these sets only include information on equilibrium structures and some close conformers. Exploration of potential energy surface provides an important information on ground and transition states, but analysis of such data is complicated due to the number of possible reaction pathways. Here, we present RePathDB, a database system for managing 3D structural data for both ground and transition states resulted from quantum chemical calculations. Our tool allows to store, to assemble and to analyze reaction pathway data. It combines relational database CGR DB for handling compounds and reactions as molecular graphs with a graph database architecture for the pathway analysis by graph algorithms. Original Condensed Graph of Reaction Technology is used to store any chemical reaction as a single graph.

Discovery of a Difluoroglycine Synthesis Method through Quantum Chemical Calculations

2020 ◽  
Author(s):  
Tsuyoshi Mita ◽  
Yu Harabuchi ◽  
Satoshi Maeda
Keyword(s):  
Quantum Chemical Calculations ◽  
Experimental Verification ◽  
Quantum Chemical ◽  
Synthesis Method ◽  
Target Product ◽  
Systematic Exploration ◽  
Hands On ◽  
Retrosynthetic Analysis ◽  
Synthetic Routes ◽  
Verification Process

The systematic exploration of synthetic pathways to afford a desired product through quantum chemical calculations remains a considerable challenge. In 2013, Maeda et al. introduced ‘quantum chemistry aided retrosynthetic analysis’ (QCaRA), which uses quantum chemical calculations to search systematically for decomposition paths of the target product and propose a synthesis method. However, until now, no new reactions suggested by QCaRA have been reported to lead to experimental discoveries. Using a difluoroglycine derivative as a target, this study investigated the ability of QCaRA to suggest various synthetic paths to the target without relying on previous data or the knowledge and experience of chemists. Furthermore, experimental verification of the seemingly most promising path led to the discovery of a synthesis method for the difluoroglycine derivative. The extent of the hands-on expertise of chemists required during the verification process was also evaluated. These insights are expected to advance the applicability of QCaRA to the discovery of viable experimental synthetic routes.

Discovery of a Difluoroglycine Synthesis Method through Quantum Chemical Calculations

2020 ◽  
Author(s):  
Tsuyoshi Mita ◽  
Yu Harabuchi ◽  
Satoshi Maeda
Keyword(s):  
Quantum Chemical Calculations ◽  
Experimental Verification ◽  
Quantum Chemical ◽  
Synthesis Method ◽  
Target Product ◽  
Systematic Exploration ◽  
Hands On ◽  
Retrosynthetic Analysis ◽  
Synthetic Routes ◽  
Verification Process

The systematic exploration of synthetic pathways to afford a desired product through quantum chemical calculations remains a considerable challenge. In 2013, Maeda et al. introduced ‘quantum chemistry aided retrosynthetic analysis’ (QCaRA), which uses quantum chemical calculations to search systematically for decomposition paths of the target product and propose a synthesis method. However, until now, no new reactions suggested by QCaRA have been reported to lead to experimental discoveries. Using a difluoroglycine derivative as a target, this study investigated the ability of QCaRA to suggest various synthetic paths to the target without relying on previous data or the knowledge and experience of chemists. Furthermore, experimental verification of the seemingly most promising path led to the discovery of a synthesis method for the difluoroglycine derivative. The extent of the hands-on expertise of chemists required during the verification process was also evaluated. These insights are expected to advance the applicability of QCaRA to the discovery of viable experimental synthetic routes.

The Nature of Chemisorbed CO2 in Zeolite A

2019 ◽  
Author(s):  
Przemyslaw Rzepka ◽  
Zoltán Bacsik ◽  
Andrew J. Pell ◽  
Niklas Hedin ◽  
Aleksander Jaworski
Keyword(s):  
Solid State ◽  
Ir Spectroscopy ◽  
Quantum Chemical Calculations ◽  
Quantum Chemical ◽  
Surface Coverage ◽  
Gas Mixtures ◽  
Mas Nmr ◽  
Significant Fraction ◽  
Zeolite A

Formation of CO<sub>3</sub><sup>2-</sup> and HCO<sub>3</sub><sup>-</sup> species without participation of the framework oxygen atoms upon chemisorption of CO<sub>2</sub> in zeolite |Na<sub>12</sub>|-A is revealed. The transfer of O and H atoms is very likely to have proceeded via the involvement of residual H<sub>2</sub>O or acid groups. A combined study by solid-state <sup>13</sup>C MAS NMR, quantum chemical calculations, and <i>in situ</i> IR spectroscopy showed that the chemisorption mainly occurred by the formation of HCO<sub>3</sub><sup>-</sup>. However, at a low surface coverage of physisorbed and acidic CO<sub>2</sub>, a significant fraction of the HCO<sub>3</sub><sup>-</sup> was deprotonated and transformed into CO<sub>3</sub><sup>2-</sup>. We expect that similar chemisorption of CO<sub>2</sub> would occur for low-silica zeolites and other basic silicates of interest for the capture of CO<sub>2</sub> from gas mixtures.

Mechanistic Investigation of Rh(I)-Catalyzed Asymmetric Suzuki-Miyaura Coupling with Racemic Allyl Halides

2019 ◽  
Author(s):  
Lucy van Dijk ◽  
Ruchuta Ardkhean ◽  
Mireia Sidera ◽  
Sedef Karabiyikoglu ◽  
Özlem Sari ◽  
...  
Keyword(s):  
Quantum Chemical Calculations ◽  
Quantum Chemical ◽  
Experimental Studies ◽  
Mechanistic Investigation ◽  
Allyl Halides

A mechanism for Rh(I)-catalyzed asymmetric Suzuki-Miyaura coupling with racemic allyl halides is proposed based on a combination of experimental studies and quantum chemical calculations. <br>

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