Determination and use of a corrected control factor in the chloroform fumigation method of estimating soil microbial biomass

1995 ◽  
Vol 19 (4) ◽  
pp. 287-291 ◽  
Author(s):  
J. L. Smith ◽  
J. J. Halvorson ◽  
H. Bolton
Keyword(s):  
Microbial Biomass ◽  
Soil Microbial Biomass ◽  
Control Factor ◽  
Soil Microbial ◽  
Chloroform Fumigation ◽  
Chloroform Fumigation Method

scholarly journals Defining a realistic control for the chloroform fumigation-incubation method using microscopic counting and 14C-substrates

1996 ◽  
Vol 76 (4) ◽  
pp. 459-467 ◽  
Author(s):  
William R. Horwath ◽  
Eldor A. Paul ◽  
David Harris ◽  
Jeannette Norton ◽  
Leslie Jagger ◽  
...  
Keyword(s):  
Microbial Biomass ◽  
Soil Microbial Biomass ◽  
Microbial Biomass Carbon ◽  
Soil Depth ◽  
Temporal Trends ◽  
Biomass Carbon ◽  
Soil Microbial ◽  
Microbial C ◽  
Parameter Values ◽  
Chloroform Fumigation

Chloroform fumigation-incubation (CFI) has made possible the extensive characterization of soil microbial biomass carbon (C) (MBC). Defining the non-microbial C mineralized in soils following fumigation remains the major limitation of CFI. The mineralization of non-microbial C during CFI was examined by adding 14C-maize to soil before incubation. The decomposition of the 14C-maize during a 10-d incubation after fumigation was 22.5% that in non-fumigated control soils. Re-inoculation of the fumigated soil raised 14C-maize decomposition to 77% that of the unfumigated control. A method was developed which varies the proportion of mineralized C from the unfumigated soil (UFC) that is subtracted in calculating CFI biomasss C. The proportion subtracted (P) varies according to a linear function of the ratio of C mineralized in the fumigated (FC) and unfumigated samples (FC/UFC) with two parameters K1 and K2 (P = K1FC/UFC) + K2). These parameters were estimated by regression of CFI biomass C, calculated according to the equation MBC = (FC − PUFC)/0.41, against that derived by direct microscopy in a series of California soils. Parameter values which gave the best estimate of microscopic biomass from the fumigation data were K1 = 0.29 and K2 = 0.23 (R2 = 0.87). Substituting these parameter values, the equation can be simplified to MBC = 1.73FC − 0.56UFC. The equation was applied to other CFI data to determine its effect on the measurement of MBC. The use of this approach corrected data that were previously difficult to interpret and helped to reveal temporal trends and changes in MBC associated with soil depth. Key words: Chloroform fumigation-incubation, soil microbial biomass, microscopically estimated biomass, carbon, control, 14C

scholarly journals Measurement of microbial biomass N:C by chloroform fumigation-incubation

1997 ◽  
Vol 77 (4) ◽  
pp. 507-514 ◽  
Author(s):  
D. Harris ◽  
R. P. Voroney ◽  
E. A. Paul
Keyword(s):  
Microbial Biomass ◽  
Soil Microbial Biomass ◽  
C:N Ratio ◽  
Residual Fraction ◽  
Model Parameters ◽  
C Mineralization ◽  
Microbial Biomass Nitrogen ◽  
Soil Microbial ◽  
Biomass N ◽  
Chloroform Fumigation

We present a calculation for soil microbial biomass N:C ratio determined from a 10-d incubation following chloroform fumigation. The calculation is based on a mathematical model of the N content of the pre- and post-fumigation soil microbial biomass and the growth yield of the biomass that develops after fumigation. Biomass N is calculated from the N:C ratio and biomass C. The mineralization of bacteria and fungi, with different N contents, added to fumigated soils was used to establish the model parameters. The model was tested against an independent set of measurements and considers two assumptions: 1) The ratio of N:C mineralized from killed biomass is equal to the ratio of N:C mineralized from soil non-biomass constituents. 2) More realistically, the N and C mineralization in the fumigated soil, from sources other than killed biomass, is a residual fraction of the N and C mineralization in the unfumigated soil. Biomass C:N ratios calculated without a control correction (assumption 1) were, on average, 20% wider than corrected values (assumption 2). Biomass N calculated as the product of N:C and biomass C was compared with published values for several data sets. The new calculation method was robust even when net immobilization of N followed fumigation. Key words: Soil microbial biomass, nitrogen, chloroform fumigation, C:N ratio

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