Abstract
Oilseed rape (Brassica napus) is one of the most important oil-producing crops worldwide. The narrow gene pool of oilseed rape hampers its resistance breeding. Sclerotinia stem rot (SSR), caused by Sclerotinia sclerotiorum, is one of the most destructive diseases in many oilseed rape growing regions, worldwide. So far, no effective genetic source of resistance to S. sclerotiorum in B. napus germplasm is available, and yet knowledge of molecular plant-fungal interactions is limited. To identify new resistance source against SSR, we generated a segregating F2 population for Sclerotinia resistance with 510 individuals from an interspecific cross between the resistant B. villosa (BRA1896) and a wild susceptible B. oleracea (BRA1909). Genetic mapping using a 15k Illumina Infinium SNP-array resulted in a high-density genetic map that contains 1,118 markers and spans a total genetic length of 792.2 cM. QTL-analysis identified 7 QTLs for Sclerotinia-resistance and 5 QTLs for trichome-phenotype, which explain up to 16.85 % and 34.45 % of corresponding phenotypic variance, respectively. Although a partial co-localization of major QTLs for trichome-phenotype and Sclerotinia-resistance was given, no functional association between these two traits could be validated. In addition, comparative RNAseq analysis suggests that activation of JA- and ethylene-mediated responses plays a central role in the Sclerotinia-resistance, associated with a stronger plant immune response, depressed cell death and elevated phytoalexin biosynthesis in B. villosa. Our data demonstrate that the wild Brassica oleracea complex represents a novel and unique genetic source of Sclerotinia resistance for breeding resistant oilseed rape against SSR.