Improved Success of Phenotype Prediction of the Human Immunodeficiency Virus Type 1 from Envelope Variable Loop 3 Sequence Using Neural Networks

Wolfgang Resch; Noah Hoffman; Ronald Swanstrom

doi:10.1006/viro.2001.1087

Improved Success of Phenotype Prediction of the Human Immunodeficiency Virus Type 1 from Envelope Variable Loop 3 Sequence Using Neural Networks

Virology ◽

10.1006/viro.2001.1087 ◽

2001 ◽

Vol 288 (1) ◽

pp. 51-62 ◽

Cited By ~ 143

Author(s):

Wolfgang Resch ◽

Noah Hoffman ◽

Ronald Swanstrom

Keyword(s):

Neural Networks ◽

Human Immunodeficiency Virus ◽

Human Immunodeficiency Virus Type ◽

Virus Type ◽

Phenotype Prediction ◽

Variable Loop ◽

Immunodeficiency Virus

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Immunogenicity and Ability of Variable Loop-Deleted Human Immunodeficiency Virus Type 1 Envelope Glycoproteins to Elicit Neutralizing Antibodies

Virology ◽

10.1006/viro.2002.1727 ◽

2003 ◽

Vol 305 (1) ◽

pp. 124-137 ◽

Cited By ~ 48

Author(s):

Young B. Kim ◽

Dong P. Han ◽

Carlos Cao ◽

Michael W. Cho

Keyword(s):

Human Immunodeficiency Virus ◽

Human Immunodeficiency Virus Type ◽

Virus Type ◽

Neutralizing Antibodies ◽

Envelope Glycoproteins ◽

Variable Loop ◽

Immunodeficiency Virus

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Variable-Loop-Deleted Variants of the Human Immunodeficiency Virus Type 1 Envelope Glycoprotein Can Be Stabilized by an Intermolecular Disulfide Bond between the gp120 and gp41 Subunits

Journal of Virology ◽

10.1128/.74.11.5091-5100.2000 ◽

2000 ◽

Vol 74 (11) ◽

pp. 5091-5100 ◽

Cited By ~ 2

Author(s):

Rogier W. Sanders ◽

Linnea Schiffner ◽

Aditi Master ◽

Francis Kajumo ◽

Yong Guo ◽

...

Keyword(s):

Human Immunodeficiency Virus ◽

Human Immunodeficiency Virus Type ◽

Virus Type ◽

Disulfide Bond ◽

Envelope Glycoprotein ◽

Variable Loop ◽

Intermolecular Disulfide Bond ◽

Immunodeficiency Virus

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Effect of partial and complete variable loop deletions of the human immunodeficiency virus type 1 envelope glycoprotein on the breadth of gp160-specific immune responses

Virology ◽

10.1016/j.virol.2003.10.009 ◽

2004 ◽

Vol 318 (2) ◽

pp. 493-506 ◽

Cited By ~ 22

Author(s):

Jaroslaw Gzyl ◽

Elizabeth Bolesta ◽

Andrew Wierzbicki ◽

Dariusz Kmieciak ◽

Toshio Naito ◽

...

Keyword(s):

Human Immunodeficiency Virus ◽

Immune Responses ◽

Human Immunodeficiency Virus Type ◽

Virus Type ◽

Envelope Glycoprotein ◽

Variable Loop ◽

Immunodeficiency Virus

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Phosphorothioate Oligodeoxynucleotides Bind to the Third Variable Loop Domain (v3) of Human Immunodeficiency Virus Type 1 gp120

Antisense Research and Development ◽

10.1089/ard.1993.3.19 ◽

1993 ◽

Vol 3 (1) ◽

pp. 19-31 ◽

Cited By ~ 60

Author(s):

C.A. STEIN ◽

AILEEN M. CLEARY ◽

LEONID YAKUBOV ◽

SETH LEDERMAN

Keyword(s):

Human Immunodeficiency Virus ◽

Human Immunodeficiency Virus Type ◽

Virus Type ◽

The Third ◽

Variable Loop ◽

Loop Domain ◽

Immunodeficiency Virus ◽

Phosphorothioate Oligodeoxynucleotides

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Relationship of the human immunodeficiency virus type 1 gp120 third variable loop to a component of the CD4 binding site in the fourth conserved region.

Journal of Virology ◽

10.1128/jvi.66.12.6997-7004.1992 ◽

1992 ◽

Vol 66 (12) ◽

pp. 6997-7004 ◽

Cited By ~ 48

Author(s):

R Wyatt ◽

M Thali ◽

S Tilley ◽

A Pinter ◽

M Posner ◽

...

Keyword(s):

Human Immunodeficiency Virus ◽

Binding Site ◽

Human Immunodeficiency Virus Type ◽

Virus Type ◽

Variable Loop ◽

Immunodeficiency Virus ◽

Cd4 Binding Site ◽

Conserved Region ◽

Relationship Of

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Vaccine induced antibodies to the first variable loop of human immunodeficiency virus type 1 gp120, mediate antibody-dependent virus inhibition in macaques

Vaccine ◽

10.1016/j.vaccine.2011.10.040 ◽

2011 ◽

Vol 30 (1) ◽

pp. 78-94 ◽

Cited By ~ 15

Author(s):

Izabela Bialuk ◽

Stephen Whitney ◽

Vibeke Andresen ◽

Ruth H. Florese ◽

Janos Nacsa ◽

...

Keyword(s):

Human Immunodeficiency Virus ◽

Human Immunodeficiency Virus Type ◽

Virus Type ◽

Variable Loop ◽

Virus Inhibition ◽

Immunodeficiency Virus

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Involvement of the V1/V2 variable loop structure in the exposure of human immunodeficiency virus type 1 gp120 epitopes induced by receptor binding.

Journal of Virology ◽

10.1128/jvi.69.9.5723-5733.1995 ◽

1995 ◽

Vol 69 (9) ◽

pp. 5723-5733 ◽

Cited By ~ 323

Author(s):

R Wyatt ◽

J Moore ◽

M Accola ◽

E Desjardin ◽

J Robinson ◽

...

Keyword(s):

Human Immunodeficiency Virus ◽

Human Immunodeficiency Virus Type ◽

Virus Type ◽

Receptor Binding ◽

Loop Structure ◽

Variable Loop ◽

Immunodeficiency Virus

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Use of Dried Spots of Whole Blood, Plasma, and Mother's Milk Collected on Filter Paper for Measurement of Human Immunodeficiency Virus Type 1 Burden

Yearbook of Pathology and Laboratory Medicine ◽

10.1016/s1077-9108(08)70752-7 ◽

2008 ◽

Vol 2008 ◽

pp. 351-352

Author(s):

M.G. Bissell

Keyword(s):

Human Immunodeficiency Virus ◽

Blood Plasma ◽

Human Immunodeficiency Virus Type ◽

Virus Type ◽

Filter Paper ◽

Whole Blood ◽

Immunodeficiency Virus ◽

Mother's Milk ◽

Mother’S Milk

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Detection of human immunodeficiency virus type 1 and human papillomavirus type 16 in acquired immunodeficiency syndrome-related and classic Kaposi's sarcoma

Archives of Dermatology ◽

10.1001/archderm.129.12.1620 ◽

1993 ◽

Vol 129 (12) ◽

pp. 1620-1622 ◽

Cited By ~ 1

Author(s):

H. Fujiwara

Keyword(s):

Human Immunodeficiency Virus ◽

Human Papillomavirus ◽

Human Immunodeficiency Virus Type ◽

Virus Type ◽

Acquired Immunodeficiency Syndrome ◽

Human Papillomavirus Type 16 ◽

Immunodeficiency Virus ◽

Acquired Immunodeficiency ◽

Immunodeficiency Syndrome

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LONGITUDINAL ANALYSIS OF HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 RNA IN BREAST MILK AND OF ITS RELATIONSHIP TO INFANT INFECTION AND MATERNAL DISEASE

PEDIATRICS ◽

10.1542/peds.114.2.s1.552-a ◽

2004 ◽

Vol 114 (2) ◽

pp. 552-552

Author(s):

J. A. Church

Keyword(s):

Human Immunodeficiency Virus ◽

Breast Milk ◽

Human Immunodeficiency Virus Type ◽

Virus Type ◽

Longitudinal Analysis ◽

Immunodeficiency Virus ◽

Maternal Disease

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