VII. Yeast sequencing reports. DNA sequence analysis of a 35 kb segment fromSaccharomyces cerevisiae chromosome VII reveals 19 open reading frames includingRAD54, ACE1/CUP2, PMR1, RCK1, AMS1 andCAL1/CDC43

Yeast ◽  
1995 ◽  
Vol 11 (14) ◽  
pp. 1413-1419 ◽  
Author(s):  
C. M. James ◽  
K. J. Indge ◽  
S. G. Oliver
Keyword(s):  
Sequence Analysis ◽  
Dna Sequence ◽  
Dna Sequence Analysis ◽  
Open Reading Frames ◽  
Reading Frames

XV. Yeast sequencing reports. DNA sequence analysis of a 13 kbp fragment of the left arm of yeast chromosome XV containing seven new open reading frames

Yeast ◽  
1995 ◽  
Vol 11 (13) ◽  
pp. 1281-1288 ◽  
Author(s):  
Antonio Casamayor ◽  
Martí Aldea ◽  
Celia Casas ◽  
Enrique Herrero ◽  
Francisco-Javier Gamo ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Dna Sequence ◽  
Dna Sequence Analysis ◽  
Open Reading Frames ◽  
Yeast Chromosome ◽  
Reading Frames

scholarly journals DNA Sequence Analysis of a Bioluminescent Marine Bacterium

2008 ◽  
Author(s):  
Benjamin Ryder
Keyword(s):  
Sequence Analysis ◽  
Dna Sequence ◽  
Marine Bacterium ◽  
Dna Sequence Analysis ◽  
Open Reading Frames ◽  
Pha Synthase ◽  
Putative Gene ◽  
Dna Fragment ◽  
Reading Frames

<p>Studies the sequencing of the DNA fragment containing the gene phaC (PHA synthase) and undertakes the search for open reading frames and putative gene matches in a bioluminescent marine bacterium.</p>

scholarly journals Identification of Driver and Passenger Mutations of FLT3 by High-Throughput DNA Sequence Analysis and Functional Assessment of Candidate Alleles

Cancer Cell ◽  
2007 ◽  
Vol 12 (6) ◽  
pp. 501-513 ◽  
Author(s):  
Stefan Fröhling ◽  
Claudia Scholl ◽  
Ross L. Levine ◽  
Marc Loriaux ◽  
Titus J. Boggon ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Dna Sequence ◽  
High Throughput ◽  
Functional Assessment ◽  
Dna Sequence Analysis ◽  
Passenger Mutations

scholarly journals Woot, an Active Gypsy-Class Retrotransposon in the Flour Beetle, Tribolium castaneum, is Associated With a Recent Mutation

Genetics ◽  
1996 ◽  
Vol 143 (1) ◽  
pp. 417-426
Author(s):  
Richard W Beeman ◽  
M Scott Thomson ◽  
John M Clark ◽  
Marco A DeCamillis ◽  
Susan J Brown ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Tribolium Castaneum ◽  
Frameshift Mutation ◽  
Open Reading Frames ◽  
Red Flour Beetle ◽  
Intron Sequence ◽  
Coding Region ◽  
Long Terminal Repeats ◽  
Flour Beetle ◽  
Reading Frames

Abstract A recently isolated, lethal mutation of the homeotic Abdominal gene of the red flour beetle Tribolium castaneum is associated with an insertion of a novel retrotransposon into an intron. Sequence analysis indicates that this retrotransposon, named Woot, is a member of the gypsy family of mobile elements. Most strains of T. castaneum appear to harbor ~25-35 copies of Woot per genome. Woot is composed of long terminal repeats of unprecedented length (3.6 kb each), flanking an internal coding region 5.0 kb in length. For most copies of Woot, the internal region includes two open reading frames (ORFs) that correspond to the gag and pol genes of previously described retrotransposons and retroviruses. The copy of Woot inserted into Abdominal bears an apparent single frameshift mutation that separates the normal second ORF into two. Woot does not appear to generate infectious virions by the criterion that no envelop gene is discernible. The association of Woot with a recent mutation suggests that this retroelement is currently transpositionally active in at least some strains.

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