XI. Yeast sequencing reports. Sequence analysis of a 10 kb fragment of yeast chromosome XI identifies theSMY1 locus and reveals sequences related to a pre-mRNA splicing factor and vacuolar ATPase subunit C plus a number of unidentified open reading frames

Yeast ◽  
1994 ◽  
Vol 10 (2) ◽  
pp. 247-255 ◽  
Author(s):  
Carolyn M. James ◽  
Manda E. Gent ◽  
Keith J. Indge ◽  
Stephen G. Oliver
Keyword(s):  
Sequence Analysis ◽  
Vacuolar Atpase ◽  
Mrna Splicing ◽  
Open Reading Frames ◽  
Splicing Factor ◽  
Atpase Subunit ◽  
Subunit C ◽  
Yeast Chromosome ◽  
Reading Frames

XV. Yeast sequencing reports. DNA sequence analysis of a 13 kbp fragment of the left arm of yeast chromosome XV containing seven new open reading frames

Yeast ◽  
1995 ◽  
Vol 11 (13) ◽  
pp. 1281-1288 ◽  
Author(s):  
Antonio Casamayor ◽  
Martí Aldea ◽  
Celia Casas ◽  
Enrique Herrero ◽  
Francisco-Javier Gamo ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Dna Sequence ◽  
Dna Sequence Analysis ◽  
Open Reading Frames ◽  
Yeast Chromosome ◽  
Reading Frames

scholarly journals Comprehensive sequence analysis of the 182 predicted open reading frames of yeast chromosome III

1992 ◽  
Vol 1 (12) ◽  
pp. 1677-1690 ◽  
Author(s):  
Peer Bork ◽  
Christos Ouzounis ◽  
Chris Sander ◽  
Michael Scharf ◽  
Reinhard Schneider ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Open Reading Frames ◽  
Yeast Chromosome ◽  
Chromosome Iii ◽  
Reading Frames

Sequence Analysis of a 10·5 kb DNA Fragment from the Yeast Chromosome VII Reveals the Presence of Three New Open Reading Frames and of a tRNAThr Gene

Yeast ◽  
1997 ◽  
Vol 13 (4) ◽  
pp. 369-372 ◽  
Author(s):  
CRISTINA MAZZONI ◽  
MAURIZIO RUZZI ◽  
TERESA RINALDI ◽  
FRANCESCA SOLINAS ◽  
FABIOLA MONTEBOVE ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Open Reading Frames ◽  
Yeast Chromosome ◽  
Dna Fragment ◽  
Reading Frames

scholarly journals Woot, an Active Gypsy-Class Retrotransposon in the Flour Beetle, Tribolium castaneum, is Associated With a Recent Mutation

Genetics ◽  
1996 ◽  
Vol 143 (1) ◽  
pp. 417-426
Author(s):  
Richard W Beeman ◽  
M Scott Thomson ◽  
John M Clark ◽  
Marco A DeCamillis ◽  
Susan J Brown ◽  
...  
Keyword(s):  
Sequence Analysis ◽  
Tribolium Castaneum ◽  
Frameshift Mutation ◽  
Open Reading Frames ◽  
Red Flour Beetle ◽  
Intron Sequence ◽  
Coding Region ◽  
Long Terminal Repeats ◽  
Flour Beetle ◽  
Reading Frames

Abstract A recently isolated, lethal mutation of the homeotic Abdominal gene of the red flour beetle Tribolium castaneum is associated with an insertion of a novel retrotransposon into an intron. Sequence analysis indicates that this retrotransposon, named Woot, is a member of the gypsy family of mobile elements. Most strains of T. castaneum appear to harbor ~25-35 copies of Woot per genome. Woot is composed of long terminal repeats of unprecedented length (3.6 kb each), flanking an internal coding region 5.0 kb in length. For most copies of Woot, the internal region includes two open reading frames (ORFs) that correspond to the gag and pol genes of previously described retrotransposons and retroviruses. The copy of Woot inserted into Abdominal bears an apparent single frameshift mutation that separates the normal second ORF into two. Woot does not appear to generate infectious virions by the criterion that no envelop gene is discernible. The association of Woot with a recent mutation suggests that this retroelement is currently transpositionally active in at least some strains.

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