The importance of larger data sets for protein secondary structure prediction with neural networks

John-Marc Chandonia; Martin Karplus

doi:10.1002/pro.5560050422

The importance of larger data sets for protein secondary structure prediction with neural networks

Protein Science ◽

10.1002/pro.5560050422 ◽

1996 ◽

Vol 5 (4) ◽

pp. 768-774 ◽

Cited By ~ 32

Author(s):

John-Marc Chandonia ◽

Martin Karplus

Keyword(s):

Neural Networks ◽

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Data Sets ◽

Protein Secondary Structure Prediction

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A Combination of Support Vector Machines and Bidirectional Recurrent Neural Networks for Protein Secondary Structure Prediction

AI*IA 2003: Advances in Artificial Intelligence - Lecture Notes in Computer Science ◽

10.1007/978-3-540-39853-0_12 ◽

2003 ◽

pp. 142-153 ◽

Cited By ~ 4

Author(s):

Alessio Ceroni ◽

Paolo Frasconi ◽

Andrea Passerini ◽

Alessandro Vullo

Keyword(s):

Neural Networks ◽

Support Vector Machines ◽

Secondary Structure ◽

Recurrent Neural Networks ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Support Vector ◽

Protein Secondary Structure Prediction ◽

Vector Machines

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Protein secondary structure prediction using three neural networks and a segmental semi Markov model

Mathematical Biosciences ◽

10.1016/j.mbs.2008.11.001 ◽

2009 ◽

Vol 217 (2) ◽

pp. 145-150 ◽

Cited By ~ 21

Author(s):

Seyed Amir Malekpour ◽

Sima Naghizadeh ◽

Hamid Pezeshk ◽

Mehdi Sadeghi ◽

Changiz Eslahchi

Keyword(s):

Neural Networks ◽

Secondary Structure ◽

Markov Model ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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Combining Deep Neural Networks for Protein Secondary Structure Prediction

IEEE Access ◽

10.1109/access.2020.2992084 ◽

2020 ◽

Vol 8 ◽

pp. 84362-84370

Author(s):

Shusen Zhou ◽

Hailin Zou ◽

Chanjuan Liu ◽

Mujun Zang ◽

Tong Liu

Keyword(s):

Neural Networks ◽

Secondary Structure ◽

Structure Prediction ◽

Deep Neural Networks ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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Protein secondary structure prediction using neural networks

10.1117/12.541411 ◽

2004 ◽

Author(s):

Preeti Singh ◽

Yan-Qing Zhang

Keyword(s):

Neural Networks ◽

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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Protein secondary structure prediction using modular reciprocal bidirectional recurrent neural networks

Computer Methods and Programs in Biomedicine ◽

10.1016/j.cmpb.2010.04.005 ◽

2010 ◽

Vol 100 (3) ◽

pp. 237-247 ◽

Cited By ~ 16

Author(s):

Sepideh Babaei ◽

Amir Geranmayeh ◽

Seyyed Ali Seyyedsalehi

Keyword(s):

Neural Networks ◽

Secondary Structure ◽

Recurrent Neural Networks ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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PROTEIN SECONDARY STRUCTURE PREDICTION METHODS BASED ONRBF NEURAL NETWORKS

Computational Methods ◽

10.1007/978-1-4020-3953-9_4 ◽

2007 ◽

pp. 1037-1043 ◽

Cited By ~ 1

Author(s):

N. Jing ◽

B. Xia ◽

C.G. Zhou ◽

Y. Wang

Keyword(s):

Neural Networks ◽

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Prediction Methods ◽

Protein Secondary Structure Prediction

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Protein Secondary Structure Prediction Using Ensemble of LSTM Neural Networks

2019 2nd International Conference on Information Systems and Computer Aided Education (ICISCAE) ◽

10.1109/iciscae48440.2019.221626 ◽

2019 ◽

Author(s):

Jian Wang ◽

Jinyong Cheng ◽

Zhigang Zhao ◽

Wenpeng Lu

Keyword(s):

Neural Networks ◽

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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Protein Secondary Structure Prediction with Partially Recurrent Neural Networks

SAR and QSAR in Environmental Research ◽

10.1080/10629369308028826 ◽

1993 ◽

Vol 1 (2-3) ◽

pp. 153-159 ◽

Cited By ~ 11

Author(s):

M. Reczko

Keyword(s):

Neural Networks ◽

Secondary Structure ◽

Recurrent Neural Networks ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

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Protein Secondary Structure Prediction Using Local Adaptive Techniques in Training Neural Networks

10.1063/1.2883831 ◽

2008 ◽

Author(s):

Lim Eng Aik ◽

Zarita Zainuddin ◽

Annie Joseph ◽

Kamel Ariffin Mohd Atan ◽

Isthrinayagy S. Krishnarajah

Keyword(s):

Neural Networks ◽

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction ◽

Adaptive Techniques

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Ensemble of Neural Networks to Solve Class Imbalance Problem of Protein Secondary Structure Prediction

International Journal of Artificial Intelligence & Applications ◽

10.5121/ijaia.2012.3602 ◽

2012 ◽

Vol 3 (6) ◽

pp. 9-20 ◽

Cited By ~ 3

Author(s):

Maryam Alirezaee

Keyword(s):

Neural Networks ◽

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Class Imbalance ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction ◽

Class Imbalance Problem ◽

Imbalance Problem

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