scholarly journals Melting thermodynamics of oligonucleic acids conjugated with relatively solvophobic linear polymers: A coarse‐grained molecular simulation study

2019 ◽  
Vol 57 (18) ◽  
pp. 1196-1208 ◽  
Author(s):  
Ammu Prhashanna ◽  
Arthi Jayaraman
Keyword(s):  
Molecular Simulation ◽  
Simulation Study ◽  
Coarse Grained ◽  
Linear Polymers ◽  
Melting Thermodynamics

Effect of oligonucleic acid (ONA) backbone features on assembly of ONA–star polymer conjugates: a coarse-grained molecular simulation study

Soft Matter ◽  
2017 ◽  
Vol 13 (38) ◽  
pp. 6770-6783 ◽  
Author(s):  
Joshua E. Condon ◽  
Arthi Jayaraman
Keyword(s):  
Molecular Simulation ◽  
Simulation Study ◽  
Coarse Grained ◽  
Star Polymer ◽  
Backbone Flexibility ◽  
Polymer Architecture ◽  
Polymer Conjugates ◽  
Coarse Grained Simulations

Using coarse-grained simulations, we study the effect of varying oligonucleic acid (ONA) backbone flexibility, ONA charge and star polymer architecture on structure and thermodynamics of ONA–star polymer conjugates assembly.

scholarly journals Self-assembly behaviours of primitive and modern lipid membrane solutions: a coarse-grained molecular simulation study

2016 ◽  
Vol 18 (28) ◽  
pp. 19426-19432 ◽  
Author(s):  
Noriyoshi Arai ◽  
Yuki Yoshimoto ◽  
Kenji Yasuoka ◽  
Toshikazu Ebisuzaki
Keyword(s):  
Molecular Simulation ◽  
Simulation Study ◽  
Self Assembly ◽  
Lipid Membrane ◽  
Water Systems ◽  
Coarse Grained ◽  
Early Earth

This paper presents a method to systematically model the behaviour of prebiotic lipid–water systems over a range of plausible early Earth conditions.

scholarly journals pH-dependent response of coiled coils: a coarse-grained molecular simulation study

2013 ◽  
Vol 111 (22-23) ◽  
pp. 3363-3371 ◽  
Author(s):  
Marta Enciso ◽  
Christof Schütte ◽  
Luigi Delle Site
Keyword(s):  
Molecular Simulation ◽  
Simulation Study ◽  
Coiled Coils ◽  
Coarse Grained ◽  
Ph Dependent
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