scholarly journals Influence of nitrate and nitrite concentration on N2O production via dissimilatory nitrate/nitrite reduction to ammonium inBacillus paralicheniformisLMG 6934

2018 ◽  
Vol 7 (4) ◽  
pp. e00592 ◽  
Author(s):  
Yihua Sun ◽  
Paul De Vos ◽  
Anne Willems
2019 ◽  
Vol 98 ◽  
pp. 12013
Author(s):  
Rosanna Margalef-Marti ◽  
Raul Carrey ◽  
Albert Soler ◽  
Neus Otero

Biotic and abiotic laboratory experiments of nitrate and nitrite reduction by Fe-containing minerals were performed and the isotopic fractionation of the different reactions was calculated in order to determine whether it is possible to distinguish biotic and abiotic reactions involving N compounds. Results of biotic experiments showed nitrate reduction up to 96 % with transient NO2- accumulation and no significant N2O production. No significant nitrate attenuation was observed in abiotic nitrate reduction experiments. Abiotic experiments of nitrite reduction showed a rapid decrease in nitrite concentrations in those experiments with added Fe2+ coupled with a significant N2O production. Preliminary results of the N and O isotopic fractionation of the biotic experiments of nitrate reduction show differences in the ε15NNO3 and ε18ONO3 when different minerals were added. The abiotic experiments of nitrite reduction contrarily, showed similar ε15NNO2 in all the experiments.


2018 ◽  
Vol 15 (20) ◽  
pp. 6127-6138 ◽  
Author(s):  
Qixing Ji ◽  
Claudia Frey ◽  
Xin Sun ◽  
Melanie Jackson ◽  
Yea-Shine Lee ◽  
...  

Abstract. Nitrous oxide (N2O) is a greenhouse gas and an ozone depletion agent. Estuaries that are subject to seasonal anoxia are generally regarded as N2O sources. However, insufficient understanding of the environmental controls on N2O production results in large uncertainty about the estuarine contribution to the global N2O budget. Incubation experiments with nitrogen stable isotope tracer were used to investigate the geochemical factors controlling N2O production from denitrification in the Chesapeake Bay, the largest estuary in North America. The highest potential rates of water column N2O production via denitrification (7.5±1.2 nmol-N L−1 h−1) were detected during summer anoxia, during which oxidized nitrogen species (nitrate and nitrite) were absent from the water column. At the top of the anoxic layer, N2O production from denitrification was stimulated by addition of nitrate and nitrite. The relative contribution of nitrate and nitrite to N2O production was positively correlated with the ratio of nitrate to nitrite concentrations. Increased oxygen availability, up to 7 µmol L−1 oxygen, inhibited both N2O production and the reduction of nitrate to nitrite. In spring, high oxygen and low abundance of denitrifying microbes resulted in undetectable N2O production from denitrification. Thus, decreasing the nitrogen input into the Chesapeake Bay has two potential impacts on the N2O production: a lower availability of nitrogen substrates may mitigate short-term N2O emissions during summer anoxia; and, in the long-run (timescale of years), eutrophication will be alleviated and subsequent reoxygenation of the bay will further inhibit N2O production.


1996 ◽  
Vol 34 (1-2) ◽  
pp. 355-362 ◽  
Author(s):  
Hiroaki Furumai ◽  
Hideki Tagui ◽  
Kenji Fujita

Two laboratory-scale biological filters were operated to investigate the effects of alkalinity and pH on removal of nitrate and nitrite in sulfur denitrification filter processes. The concentration of sodium bicarbonate in the feed media was changed from 120 to 240 mg/l during about 3 months in a filter (Run A). The other filter was initially fed with 300 mg/l and then with 240 mg/l (Run B). The performance of the filter was monitored by measuring pH, nitrate, nitrite, sulfate, alkalinity, and thiosulfate. Nitrate concentration in effluent rapidly decreased to lower levels within several days for both filters after inoculation of enrichment culture of sulfur denitrifiers. However there was a large difference in removal of nitrite. When rapid removal of nitrate took place, nitrite accumulation was observed and remained while the bicarbonate concentration was 120 and 150 mg/l. On the other hand the nitrite accumulation disappeared when more bicarbonate (240 and 300 mg/l) was supplied. The experimental results indicated that the nitrite accumulation was closely related to pH condition and alkalinity level in the filter. The stable data of effluent water quality for 5 cases were collected and the relationship discussed between nitrite concentration and pH in effluents. The relationship indicated a strong pH dependency on nitrite accumulation below pH of 7.4. The pH condition around 7 is not so inhibitory to biological activity. Therefore, the pH within the biofilm would be low enough to suppress the nitrite reduction by sulfur denitrifiers, while the pH in effluent was not in the inhibitory range. It was recommended to keep the pH higher than 7.4 to prevent nitrite accumulation in the sulfur denitrification filter.


2017 ◽  
Vol 14 (20) ◽  
pp. 4795-4813 ◽  
Author(s):  
Alexander Galán ◽  
Bo Thamdrup ◽  
Gonzalo S. Saldías ◽  
Laura Farías

Abstract. The upwelling system off central Chile (36.5° S) is seasonally subjected to oxygen (O2)-deficient waters, with a strong vertical gradient in O2 (from oxic to anoxic conditions) that spans a few metres (30–50 m interval) over the shelf. This condition inhibits and/or stimulates processes involved in nitrogen (N) removal (e.g. anammox, denitrification, and nitrification). During austral spring (September 2013) and summer (January 2014), the main pathways involved in N loss and its speciation, in the form of N2 and/or N2O, were studied using 15N-tracer incubations, inhibitor assays, and the natural abundance of nitrate isotopes along with hydrographic information. Incubations were developed using water retrieved from the oxycline (25 m depth) and bottom waters (85 m depth) over the continental shelf off Concepción, Chile. Results of 15N-labelled incubations revealed higher N removal activity during the austral summer, with denitrification as the dominant N2-producing pathway, which occurred together with anammox at all times. Interestingly, in both spring and summer maximum potential N removal rates were observed in the oxycline, where a greater availability of oxygen was observed (maximum O2 fluctuation between 270 and 40 µmol L−1) relative to the hypoxic bottom waters ( <  20 µmol O2 L−1). Different pathways were responsible for N2O produced in the oxycline and bottom waters, with ammonium oxidation and dissimilatory nitrite reduction, respectively, as the main source processes. Ammonium produced by dissimilatory nitrite reduction to ammonium (DNiRA) could sustain both anammox and nitrification rates, including the ammonium utilized for N2O production. The temporal and vertical variability of δ15N-NO3− confirms that multiple N-cycling processes are modulating the isotopic nitrate composition over the shelf off central Chile during spring and summer. N removal processes in this coastal system appear to be related to the availability and distribution of oxygen and particles, which are a source of organic matter and the fuel for the production of other electron donors (i.e. ammonium) and acceptors (i.e. nitrate and nitrite) after its remineralization. These results highlight the links between several pathways involved in N loss. They also establish that different mechanisms supported by alternative N substrates are responsible for substantial accumulation of N2O, which are frequently observed as hotspots in the oxycline and bottom waters. Considering the extreme variation in oxygen observed in several coastal upwelling systems, these findings could help to understand the ecological and biogeochemical implications due to global warming where intensification and/or expansion of the oceanic OMZs is projected.


2006 ◽  
Vol 3 (3) ◽  
pp. 665-695 ◽  
Author(s):  
S. W. A. Naqvi ◽  
H. Naik ◽  
A. Pratihary ◽  
W. D’ Souza ◽  
P. V. Narvekar ◽  
...  

Abstract. The Arabian Sea contains one of the three major open-ocean denitrification zones in the world. In addition, pelagic denitrification also occurs over the inner and mid-shelf off the west coast of India. The major differences between the two environments are highlighted using the available data. The perennial open-ocean system occupies two orders of magnitude larger volume than the seasonal coastal system, however, the latter offers more extreme conditions (greater nitrate consumption leading to complete anoxia). Unlike the open-ocean system, the coastal system seems to have undergone a change (i.e., it has intensified) over the past few decades presumably due to enhanced nutrient loading from land. The two systems also differ from each other with regard to the modes of nitrous oxide (N2O) production: in the open-ocean suboxic zone, an accumulation of secondary nitrite (NO2−) is invariably accompanied by depletion of N2O whereas in the coastal suboxic zone high NO2− and very high N2O concentrations frequently co-occur, indicating, respectively, net consumption and net production of N2O by denitrifiers. The extents of heavier isotope enrichment in the combined nitrate and nitrite (NO3−+NO2−) pool and in N2O in reducing waters appear to be considerably smaller in the coastal region, reflecting more varied sources/sinks and/or different isotopic fractionation factors.


2020 ◽  
Vol 548 ◽  
pp. 119691
Author(s):  
Rosanna Margalef-Marti ◽  
Raúl Carrey ◽  
José Antonio Benito ◽  
Vicenç Marti ◽  
Albert Soler ◽  
...  

2019 ◽  
Vol 16 (23) ◽  
pp. 4601-4612 ◽  
Author(s):  
Steffen Buessecker ◽  
Kaitlyn Tylor ◽  
Joshua Nye ◽  
Keith E. Holbert ◽  
Jose D. Urquiza Muñoz ◽  
...  

Abstract. Chemodenitrification – the non-enzymatic process of nitrite reduction – may be an important sink for fixed nitrogen in tropical peatlands. Rates and products of chemodenitrification are dependent on O2, pH, Fe2+ concentration, and organic matter composition, which are variable across peat soils. Assessing abiotic reaction pathways is difficult because sterilization and inhibition agents can alter the availability of reactants by changing iron speciation and organic matter composition. We compared six commonly used soil sterilization techniques – γ irradiation, chloroform, autoclaving, and the use of three different chemical inhibitors (mercury, zinc, and azide) – for their compatibility with chemodenitrification assays for tropical peatland soils (organic-rich, low-pH soil from the eastern Amazon). Out of the six techniques, γ irradiation resulted in soil treatments with the lowest cell viability and denitrification activity and the least effect on pH, iron speciation, and organic matter composition. Nitrite depletion rates in γ-irradiated soils were highly similar to untreated (live) soils, whereas other sterilization techniques showed deviations. Chemodenitrification was a dominant process of nitrite consumption in tropical peatland soils assayed in this study. Nitrous oxide (N2O) is one possible product of chemodenitrification reactions. Abiotic N2O production was low to moderate (3 %–16 % of converted nitrite), and different sterilization techniques lead to significant variations on production rates due to inherent processes or potential artifacts. Our work represents the first methodological basis for testing the abiotic denitrification and N2O production potential in tropical peatland soil.


Author(s):  
LEONARD BEEVERS ◽  
RICHARD H. HAGEMAN

2016 ◽  
Vol 82 (14) ◽  
pp. 4190-4199 ◽  
Author(s):  
Tekle Tafese Fida ◽  
Chuan Chen ◽  
Gloria Okpala ◽  
Gerrit Voordouw

ABSTRACTNitrate reduction to nitrite in oil fields appears to be more thermophilic than the subsequent reduction of nitrite. Concentrated microbial consortia from oil fields reduced both nitrate and nitrite at 40 and 45°C but only nitrate at and above 50°C. The abundance of thenirSgene correlated with mesophilic nitrite reduction activity.ThaueraandPseudomonaswere the dominant mesophilic nitrate-reducing bacteria (mNRB), whereasPetrobacterandGeobacilluswere the dominant thermophilic NRB (tNRB) in these consortia. The mNRBThauerasp. strain TK001, isolated in this study, reduced nitrate and nitrite at 40 and 45°C but not at 50°C, whereas the tNRBPetrobactersp. strain TK002 andGeobacillussp. strain TK003 reduced nitrate to nitrite but did not reduce nitrite further from 50 to 70°C. Testing of 12 deposited pure cultures of tNRB with 4 electron donors indicated reduction of nitrate in 40 of 48 and reduction of nitrite in only 9 of 48 incubations. Nitrate is injected into high-temperature oil fields to prevent sulfide formation (souring) by sulfate-reducing bacteria (SRB), which are strongly inhibited by nitrite. Injection of cold seawater to produce oil creates mesothermic zones. Our results suggest that preventing the temperature of these zones from dropping below 50°C will limit the reduction of nitrite, allowing more effective souring control.IMPORTANCENitrite can accumulate at temperatures of 50 to 70°C, because nitrate reduction extends to higher temperatures than the subsequent reduction of nitrite. This is important for understanding the fundamentals of thermophilicity and for the control of souring in oil fields catalyzed by SRB, which are strongly inhibited by nitrite.


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