scholarly journals Estimating size and trend of the North Interlake woodland caribou population using fecal-DNA and capture-recapture models

2012 ◽  
Vol 76 (6) ◽  
pp. 1153-1164 ◽  
Author(s):  
Peter N. Hettinga ◽  
Arni Neil Arnason ◽  
Micheline Manseau ◽  
Dale Cross ◽  
Kent Whaley ◽  
...  
Keyword(s):  
Fecal Dna ◽  
Woodland Caribou ◽  
The North ◽  
Capture Recapture

scholarly journals Using bear rub data and spatial capture-recapture models to estimate trend in a brown bear population

2019 ◽  
Vol 9 (1) ◽  
Author(s):  
Katherine C. Kendall ◽  
Tabitha A. Graves ◽  
J. Andrew Royle ◽  
Amy C. Macleod ◽  
Kevin S. McKelvey ◽  
...  
Keyword(s):  
Growth Rates ◽  
Population Change ◽  
Local Density ◽  
Brown Bear ◽  
Rate Of Change ◽  
Grizzly Bear ◽  
Conservation Area ◽  
The North ◽  
Capture Recapture ◽  
Genetic Detection

AbstractTrends in population abundance can be challenging to quantify during range expansion and contraction, when there is spatial variation in trend, or the conservation area is large. We used genetic detection data from natural bear rubbing sites and spatial capture-recapture (SCR) modeling to estimate local density and population growth rates in a grizzly bear population in northwestern Montana, USA. We visited bear rubs to collect hair in 2004, 2009—2012 (3,579—4,802 rubs) and detected 249—355 individual bears each year. We estimated the finite annual population rate of change 2004—2012 was 1.043 (95% CI = 1.017—1.069). Population density shifted from being concentrated in the north in 2004 to a more even distribution across the ecosystem by 2012. Our genetic detection sampling approach coupled with SCR modeling allowed us to estimate spatially variable growth rates of an expanding grizzly bear population and provided insight into how those patterns developed. The ability of SCR to utilize unstructured data and produce spatially explicit maps that indicate where population change is occurring promises to facilitate the monitoring of difficult-to-study species across large spatial areas.

Errors in identification using natural markings: rates, sources, and effects on capture–recapture estimates of abundance

2001 ◽  
Vol 58 (9) ◽  
pp. 1861-1870 ◽  
Author(s):  
Peter T Stevick ◽  
Per J Palsbøll ◽  
Tim D Smith ◽  
Mark V Bravington ◽  
Philip S Hammond
Keyword(s):  
Error Rate ◽  
Large Scale ◽  
False Negative ◽  
Parametric Bootstrap ◽  
Humpback Whales ◽  
The North ◽  
Abundance Estimates ◽  
Capture Recapture ◽  
Quality Rating ◽  
Estimation Of Variance

The results of a double-marking experiment using natural markings and microsatellite genetic markers to identify humpback whales (Megaptera novaeangliae) confirm that natural markings are a reliable means of identifying individuals on a large scale. Of 1410 instances of double tagging, there were 414 resightings. No false positive and 14 false negative errors were identified. The rate of error increased with decreasing photographic quality; no errors were observed among photographs of the highest quality rating, whereas an error rate of 0.125 was identified in sightings for which only part of the area used for identification was visible. There was also a weaker relationship between error rate and the distinctiveness of markings, which may result from non-independence in coding for image quality and distinctiveness. A correction is developed for the Petersen two-sample abundance estimator to account for false negative errors in identification, and a parametric bootstrap procedure for estimation of variance is also developed. In application to abundance estimates from the North Atlantic, the correction reduces the bias in estimates made using poorer quality photographs to a negligible level while maintaining comparable precision.

scholarly journals Progress towards the experimental reintroduction of woodland caribou to Minnesota and adjacent Ontario

Rangifer ◽  
1998 ◽  
Vol 18 (5) ◽  
pp. 169 ◽  
Author(s):  
Peter A. Jordan ◽  
James L. Nelson ◽  
John Pastor
Keyword(s):  
Native American ◽  
Rangifer Tarandus ◽  
Fire Suppression ◽  
Action Plan ◽  
Feasibility Studies ◽  
Timber Harvest ◽  
Environmental Benefits ◽  
Black Bears ◽  
Woodland Caribou ◽  
The North

Woodland caribou (Rangifer tarandus caribou) are native to Minnesota but started to decline in the mid 1800s and disappeared from the state by 1940. Their demise had been attributed to extensive timber harvest and ovethunting; but more recently mortality from the meningeal worm, Parelaphostrongylus tenuis, carried by white-tailed deer (Odocoileus virginianus), and increased prédation by timber wolves (Canis lupus) and black bears (Ursus americanus) have been suggested as additional causes. We describe a current initiative to explore feasibility of restoring caribou to the boundary waters region of Minnesota and Ontario. Feasibility studies have been conducted under the guidance of the North Central Catibou Corporation (NCCC), a non-governmental organization with representation from relevant state, federal, Native American, and Canadian agencies. Results indicate a) Within Minnesota the most suitable site for woodland caribou lies within the eastern sector of the Boundary Waters Canoe Area Wilderness (BWCAW), and this is contiguous with a similarly suitable sector of Ontario's Quetico Provincial Park: Together these comprise the recommended 1300-km2 Boundary Waters Caribou Region (BWCR); b) Vegetation in the BWCR has changed little since the 1920s when caribou were last present other than effects of fire suppression; c) Level of white-tailed deer, hence the meningeal worm, is so low in the BWCR that this factor is unlikely to impede survival of re-introduced caribou; d) While wolf numbers within the wider region are relatively high, their impacts may be minimized if caribou are released in small, widely scattered groups; in addition, an abundance of lakes with islands affords good summer-time prédation security; e) Threat to calves from black bears, probably more numerous than in earlier times, appears lessened by the security of lakeshores and islands; and f) A simulation model, combining knowledge from elsewhere with the BWCR assessment, suggests that released animals have a 0.2 to 0.8 chance of increasing in numbers during the first 20 years post-release. Strategies for maximizing success are identified. NCCC has concluded that the only practical approach that remains for determining restoration feasibility is through experimental releases or caribou. While promise of eventual success appears only moderate, the NCCC feels that costs and uncertainties associated with the experiment are justified by the environmental benefits from a success. Even if the effort fails, valuable knowledge would accrue for conservation biologists in general. An action plan is outlined, and progress and problems in selling the caribou initiative are discussed.

Efficient single-survey estimation of carnivore density using fecal DNA and spatial capture-recapture: a bobcat case study

2018 ◽  
Vol 60 (3) ◽  
pp. 197-209 ◽  
Author(s):  
Dana J. Morin ◽  
Lisette P. Waits ◽  
David C. McNitt ◽  
Marcella J. Kelly
Keyword(s):  
Fecal Dna ◽  
Capture Recapture

scholarly journals Refugial origin and postglacial colonization of holarctic reindeer and caribou

Rangifer ◽  
2005 ◽  
Vol 25 (1) ◽  
pp. 19-30 ◽  
Author(s):  
Knut H. Røed
Keyword(s):  
North American ◽  
Rangifer Tarandus ◽  
Nuclear Dna ◽  
Environmental Changes ◽  
Ice Sheet ◽  
The Arctic ◽  
Gene Pools ◽  
Woodland Caribou ◽  
The North ◽  
Morphological Differences

The classification and colonization of reindeer and caribou (Rangifer tarandus) was assessed from analysis of both proteins, nuclear DNA and mitochondrial DNA. I demonstrate that the current subspecies designations are not compatible with the differentiation at these markers, suggesting that the morphological differences among extant subspecies did not evolve in separate glacial refugia. Thus, morphological differences among extant subspecies probably evolved as adaptive responses to post-glacial environmental changes. An exception to this is the North American woodland caribou, where all three marker systems support a subspecies-specific refugium as the ancestral origin of these animals. Three major mtDNA haplogroups reported, represent three separate origins of the species during the last glaciation. The most influential origin has contributed to the gene pool of all extant subspecies, suggesting the existence of a large and continuous glacial population ranging across extensive areas of tundra in Eurasia and Beringia. The North American tundra forms (R.t. granti and groenlandicus) and the arctic forms (R.t platyrhynchus, R.t pearyi and R.t eogroenlandicus) almost exclusively comprise haplotypes of such an origin. Another small and isolated refugium seems to have arisen in western Eurasia in close connection to the extensive ice sheet that covered Fennoscandia. The two Eurasian subspecies R.t. tarandus and R.t. fennicus appear to have a diphyletic origin as both the putatively small and isolated Eurasian refugium and the large Beringia refugium have contributed to their gene pools. A third distinct and geographically well-defined refugial area was probably located south to the extensive North American continental ice sheet from where the ancestors of the present North American woodland caribou (R.t. caribou) likely originated.Abstract in Norwegian / Sammendrag: Systematisk inndeling og kolonisering av rein (Rangifer tarandus) ble bestemt ved å analysere for variasjon i genetiske markører som proteiner, kjerneDNA og mitokondrieDNA. Dagens oppdeling av rein i underarter viser liten overensstemmelse med variasjonsmønsteret i de undersøkte markørene, noe som viser at de morfologiske forskjellene som karakteriserer dagens underarter ikke har utviklet seg i atskilte refugier i løpet av siste istid. Unntak fra dette er nordamerikansk skogsrein (woodland caribou-R.t. caribou) hvor alle tre markørsystemene indikerer at denne har utviklet seg i et refugium forskjellig fra andre underarter. De tre registrerte hovedhaplogruppene i mitokondrie-DNA representerer tre atskilte opprinnelser av rein i løpet av siste istid. Den mest innflytelsesrike av disse bidro vesentlig til genbanken til alle dagens underarter av rein, noe som tyder på at det under siste istid eksisterte en stor reinpopulasjon med kontinuerlig utbredelse gjennom store deler av tundraen i Eurasia og Beringia. De nordamerikanske tundrareintypene (R.t. granti og R.t. groenlandicus), samt de arktiske typene (R.t. platyrhunchus, R.t. pearyi og R.t. eogroenlandicus) består nærmest utelukkende av haplotyper med denne opprinnelse. Et annet lite og isolert refugium syntes å ha oppstått i Vest-Europa i nærheten av den omfattende isbreen som dekket Fennoskandia. De to europeiske underarter, R.t. tarandus og R.t. fennicus, syntes å ha en todelt opprinnelse med genetisk påvirkning fra både det antatt lille og isolerte refugiet i Eurasia samt fra det store Beringia refugiet. Et tredje geografisk distinkt refugium var antagelig lokalisert sør for den omfattende isbreen i Nord Amerika hvorfra forfedrene til dagens nordamerikanske skogsrein (R.t. caribou) har sin mest sannsynlige opprinnelse.

Estimating Abundance of Desert Mule Deer Using Fecal DNA–Based Capture-Recapture

2021 ◽  
Vol 81 (1) ◽  
Author(s):  
Stephen S. Pfeiler ◽  
Mary M. Conner ◽  
Jane S. McKeever ◽  
Rachel S. Crowhurst ◽  
Clinton W. Epps ◽  
...  
Keyword(s):  
Mule Deer ◽  
Fecal Dna ◽  
Capture Recapture

Monitoring coyote population dynamics with fecal DNA and spatial capture-recapture

2016 ◽  
Vol 80 (5) ◽  
pp. 824-836 ◽  
Author(s):  
Dana J. Morin ◽  
Marcella J. Kelly ◽  
Lisette P. Waits
Keyword(s):  
Population Dynamics ◽  
Fecal Dna ◽  
Capture Recapture

Estimating Sonoran pronghorn abundance and survival with fecal DNA and capture-recapture methods

2016 ◽  
Vol 30 (5) ◽  
pp. 1102-1111 ◽  
Author(s):  
Susannah P. Woodruff ◽  
Paul M. Lukacs ◽  
David Christianson ◽  
Lisette P. Waits
Keyword(s):  
Fecal Dna ◽  
Capture Recapture

scholarly journals Humpback whale abundance in the North Pacific estimated by photographic capture-recapture with bias correction from simulation studies

2011 ◽  
Vol 27 (4) ◽  
pp. 793-818 ◽  
Author(s):  
Jay Barlow ◽  
John Calambokidis ◽  
Erin A. Falcone ◽  
C. Scott Baker ◽  
Alexander M. Burdin ◽  
...  
Keyword(s):  
Bias Correction ◽  
North Pacific ◽  
Humpback Whale ◽  
Simulation Studies ◽  
The North ◽  
Capture Recapture ◽  
The North Pacific
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