scholarly journals Environmental DNA detection of Arctic char ( Salvelinus alpinus ) in Irish lakes: Development and application of a species‐specific molecular assay

2020 ◽  
Vol 2 (2) ◽  
pp. 221-233
Author(s):  
Luca Mirimin ◽  
Aaron Hickey ◽  
Dylan Barrett ◽  
Fergus DeFaoite ◽  
Simona Boschetti ◽  
...  
Keyword(s):  
Salvelinus Alpinus ◽  
Dna Detection ◽  
Environmental Dna ◽  
Arctic Char ◽  
Molecular Assay ◽  
Species Specific

Laboratory experiments for the detection of environmental DNA of crayfish: Examining the potential

2015 ◽  
Vol 21 (1) ◽  
pp. 159-163 ◽  
Author(s):  
Chester R. Figiel ◽  
Sandra Bohn
Keyword(s):  
Water Samples ◽  
Dna Detection ◽  
Environmental Dna ◽  
Sampling Period ◽  
Sediment Samples ◽  
Target Dna ◽  
Invasive Crayfish ◽  
In The Wild ◽  
Species Specific ◽  
Crayfish Species

Abstract We examined methods for detecting environmental DNA of the invasive white river crayfish Procambarus zonangulus. In a laboratory experiment, we investigated detection capability in benthic sediment samples and in water samples in six flow-through tanks. Additionally we determined whether crayfish density (low = 0.67 or high = 2.69 crayfish·m-2) or crayfish time in tanks influenced DNA detectability (collection of samples on Days 2, 5, 8 and 15). Species-specific primers and probes were designed for P. zonangulus and their specificity was tested against other crayfish species. Limits of detection and quantification were specified for the target DNA sequence by means of quantitative PCR amplifications on dilution series of known amounts of P. zonangulus DNA. We detected crayfish DNA in 14 of the 24 benthic sediment samples and in two of the 24 water samples. DNA detection was found in benthic sediment samples in at least two tanks at every sampling period, while DNA detection was found in water samples only on Day 8. Crayfish DNA was detected in benthic sediment and water samples independently of crayfish density. Crayfish at both densities were observed to ‘explore’ all areas of the tank and move irrespective of diurnal time or conspecific presence. These behavior patterns were observed throughout the 15 day experiment and likely resulted in the positive detections, especially in benthic sediment samples. We believe that these methods could benefit monitoring of invasive crayfish species, although there is no doubt that further optimization and more research is needed to evaluate these techniques in the wild.

First confirmation of salmonid alphavirus infection in Arctic char Salvelinus alpinus and in Austria

2018 ◽  
Vol 130 (1) ◽  
pp. 71-76
Author(s):  
E Lewisch ◽  
T Frank ◽  
H Soliman ◽  
O Schachner ◽  
A Friedl ◽  
...  
Keyword(s):  
Salvelinus Alpinus ◽  
Arctic Char ◽  
Alphavirus Infection

scholarly journals Effects of preservation strategies on environmental DNA detection and quantification using ddPCR

2021 ◽  
Author(s):  
Quentin Mauvisseau ◽  
David Halfmaerten ◽  
Sabrina Neyrinck ◽  
Alfred Burian ◽  
Rein Brys
Keyword(s):  
Dna Detection ◽  
Environmental Dna ◽  
Detection And Quantification

scholarly journals Investigating the morphological and genetic divergence of arctic char ( Salvelinus alpinus) populations in lakes of arctic Alaska

2021 ◽  
Author(s):  
Stephen L. Klobucar ◽  
Jessica A. Rick ◽  
Elizabeth G. Mandeville ◽  
Catherine E. Wagner ◽  
Phaedra Budy
Keyword(s):  
Genetic Divergence ◽  
Salvelinus Alpinus ◽  
Arctic Char ◽  
Arctic Alaska

Influence of Parr Growth, Lake Morphology, and Freshwater Parasites on the Degree of Anadromy in Different Populations of Arctic Char (Salvelinus alpinus) in Northern Norway

1994 ◽  
Vol 51 (6) ◽  
pp. 1229-1246 ◽  
Author(s):  
Knut Kristoffersen ◽  
Morten Halvorsen ◽  
Lisbeth Jørgensen
Keyword(s):  
Salvelinus Alpinus ◽  
Relative Size ◽  
Significant Negative Correlation ◽  
Relative Volume ◽  
Arctic Char ◽  
Northern Norway ◽  
Length Relationship ◽  
Lake Morphology ◽  
Different Populations ◽  
Profundal Zone

Anadromy of nine lake populations of Arctic char (Salvelinus alpinus) in northern Norway was scored on the following criteria: prevalence of marine parasites, fish size, and size at maturity. In general, anadromy dominated in shallow lakes and residency dominated in deep lakes. The anadromy scores of the populations were significantly higher in lakes without a profundal zone compared with lakes with a profundal zone. There was also a significant negative correlation between the relative volume of the profundal zone (RPV) and the degree of anadromy and between RPV and mean parr length at ages 2+ and 3+. However, differences in parr growth could not explain all the observed variation in anadromy, and the correlation between mean parr length at ages 2+ and 3+ and the degree of anadromy in the different populations was not significant. In addition to the effect on parr growth, lake morphology seemed to influence the degree of anadromy through the relative size of different habitats, which in turn affects the number of available niches. The parr weight/length relationship and infection with the freshwater parasites Phyllodistomum umblae and Diphyllobothrium spp. did not affect the degree of anadromy.

Respiratory development in Arctic char Salvelinus alpinus under conditions of normoxia and chronic hypoxia

1977 ◽  
Vol 55 (9) ◽  
pp. 1461-1467 ◽  
Author(s):  
D. G. McDonald ◽  
B. R. McMahon
Keyword(s):  
Heart Rate ◽  
Surface Morphology ◽  
Chronic Hypoxia ◽  
Prolonged Exposure ◽  
Salvelinus Alpinus ◽  
Ventilation Rate ◽  
Arctic Char ◽  
Adult Fish ◽  
Weighted Averages ◽  
Secondary Lamellae

Changes in surface morphology of the gills, ventilation rate, and heart rate were examined in Arctic char larvae exposed to normoxia (pO2 = 121 ± 6 (SE) mmHg) or chronic hypoxia (pO2 = 33 ± 3.5 mmHg) for 47 days after hatching. A modified weighted-averages technique was developed to measure aspects of gill morphology.Early development of the gills was characterized by rapid increases in filament size and number, and the emergence and proliferation of secondary lamellae. Variations in the dimensions of the gills, as noted in adult fish, were particularly evident in the larval fish.Hypoxia caused increases in both ventilation rate and heart rate. Prolonged exposure led to a retardation of gill growth, particularly the proliferation of secondary lamellae. However, growth of individual lamellae was stimulated between 38 and 47 days.

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