scholarly journals Spatial and environmental effects on Coho Salmon life history trait variation

2020 ◽  
Vol 10 (23) ◽  
pp. 13198-13210
Author(s):  
Kimberly M. F. Tuor ◽  
Daniel D. Heath ◽  
J. Mark Shrimpton
Keyword(s):  
Life History ◽  
Environmental Effects ◽  
Coho Salmon ◽  
Life History Trait ◽  
Trait Variation

scholarly journals Loci, genes, and gene networks associated with life history variation in a model ecological organism,Daphnia pulex(complex)

2018 ◽  
Author(s):  
Jacob W. Malcom ◽  
Thomas E. Juenger ◽  
Mathew A. Leibold
Keyword(s):  
Gene Expression ◽  
Genetic Variation ◽  
Life History ◽  
Molecular Basis ◽  
Life History Traits ◽  
Evolutionary Dynamics ◽  
Daphnia Pulex ◽  
Life History Trait ◽  
Life History Variation ◽  
Trait Variation

ABSTRACTBackgroundIdentifying the molecular basis of heritable variation provides insight into the underlying mechanisms generating phenotypic variation and the evolutionary history of organismal traits. Life history trait variation is of central importance to ecological and evolutionary dynamics, and contemporary genomic tools permit studies of the basis of this variation in non-genetic model organisms. We used high density genotyping, RNA-Seq gene expression assays, and detailed phenotyping of fourteen ecologically important life history traits in a wild-caught panel of 32Daphnia pulexclones to explore the molecular basis of trait variation in a model ecological species.ResultsWe found extensive phenotypic and a range of heritable genetic variation (~0 < H2< 0.44) in the panel, and accordingly identify 75-261 genes—organized in 3-6 coexpression modules—associated with genetic variation in each trait. The trait-related coexpression modules possess well-supported promoter motifs, and in conjunction with marker variation at trans- loci, suggest a relatively small number of important expression regulators. We further identify a candidate genetic network with SNPs in eight known transcriptional regulators, and dozens of differentially expressed genes, associated with life history variation. The gene-trait associations include numerous un-annotated genes, but also support several a priori hypotheses, including an ecdysone-induced protein and several Gene Ontology pathways.ConclusionThe genetic and gene expression architecture ofDaphnialife history traits is complex, and our results provide numerous candidate loci, genes, and coexpression modules to be tested as the molecular mechanisms that underlieDaphniaeco-evolutionary dynamics.

scholarly journals Life-history Trait Variation in Native vs. Invasive Asexual New Zealand Mud Snails

2021 ◽  
Author(s):  
Carina Donne ◽  
Katelyn Larkin ◽  
Claire Adrian-Tucci ◽  
Abby Good ◽  
Carson Kephart ◽  
...  
Keyword(s):  
Genetic Variation ◽  
Life History ◽  
New Zealand ◽  
Phenotypic Variation ◽  
Freshwater Snail ◽  
Life History Trait ◽  
Life History Variation ◽  
Trait Variation ◽  
Low Genetic Diversity ◽  
Native Diversity

Abstract Potamopyrgus antipodarum is a New Zealand freshwater snail that is invasive worldwide. While native P. antipodarum populations are characterized by frequent coexistence between obligately sexual and obligately asexual individuals, only the asexual snails are known to invade other ecosystems. Despite low genetic diversity and the absence of sex, invasive asexual P. antipodarum are highly successful. Here, we quantified variation in three key life-history traits across invasive P. antipodarum lineages and compared this variation to already documented variation in these same traits in asexual native lineages to provide a deeper understanding of why some lineages become invasive. In particular, we evaluated 1) if invasive lineages of P. antipodarum could be successful because they represent life-history variation from native ancestors that could facilitate invasion, and 2) if invasive populations with higher genetic variation would display relatively high phenotypic variation. We found that invasive snails displayed a non-representative sample of native diversity, with invasive snails growing more slowly and maturing more rapidly than their native counterparts. These results are consistent with expectations of a scenario where invasive lineages represent a subset of native variation that is beneficial in the setting of invasion. Nevertheless, there was no evidence for a relationship between genetic and phenotypic variation, indicating that increased genetic variation does not necessarily translate into greater phenotypic variation, and consistent with earlier studies suggesting an important role for phenotypic plasticity in the P. antipodarum invasion. Together, these results help illuminate the mechanisms driving the worldwide expansion of invasive populations of these snails.

Life-history trait variation in tadpoles of the warty toad in response to pond drying

2010 ◽  
Vol 281 (2) ◽  
pp. 105-111 ◽  
Author(s):  
M. Márquez-García ◽  
M. Correa-Solís ◽  
M. A. Méndez
Keyword(s):  
Life History ◽  
Life History Trait ◽  
Trait Variation

scholarly journals Heterogeneous genetic basis of age at maturity in salmonid fishes

2020 ◽  
Author(s):  
Charles D. Waters ◽  
Anthony Clemento ◽  
Tutku Aykanat ◽  
John Carlos Garza ◽  
Kerry A. Naish ◽  
...  
Keyword(s):  
Life History ◽  
Atlantic Salmon ◽  
Sockeye Salmon ◽  
Genetic Basis ◽  
Coho Salmon ◽  
Strong Association ◽  
Life History Trait ◽  
Age At Maturity ◽  
A Genome ◽  
Conservation And Management

AbstractUnderstanding the genetic basis of repeated evolution of the same phenotype across taxa is a fundamental aim in evolutionary biology and has applications to conservation and management. However, the extent to which interspecific life-history trait polymorphisms share evolutionary pathways remains under-explored. We address this gap by studying the genetic basis of a key life-history trait, age at maturity, in four species of Pacific salmon (genus Oncorhynchus) that exhibit intra- and interspecific variation in this trait – Chinook Salmon, Coho Salmon, Sockeye Salmon, and Steelhead Trout. We tested for associations in all four species between age at maturity and two genome regions, six6 and vgll3, that are strongly associated with the same trait in Atlantic Salmon (Salmo salar). We also conducted a genome-wide association analysis in Steelhead to assess whether additional regions were associated with this trait. We found the genetic basis of age at maturity to be heterogeneous across salmonid species. Significant associations between six6 and age at maturity were observed in two of the four species, Sockeye and Steelhead, with the association in Steelhead being particularly strong in both sexes (p = 4.46×10−9 after adjusting for genomic inflation). However, no significant associations were detected between age at maturity and the vgll3 genome region in any of the species, despite its strong association with the same trait in Atlantic Salmon. We discuss possible explanations for the heterogeneous nature of the genetic architecture of this key life-history trait, as well as the implications of our findings for conservation and management.

scholarly journals Life-history trait variation in a queen-size dimorphic ant

2018 ◽  
Vol 43 (6) ◽  
pp. 763-773
Author(s):  
Jana I. Wolf ◽  
Pekka Punttila ◽  
Perttu Seppä
Keyword(s):  
Life History ◽  
Life History Trait ◽  
Trait Variation ◽  
Queen Size

Prey tell: what quillback rockfish early life history traits reveal about their survival in encounters with juvenile coho salmon

2020 ◽  
Vol 650 ◽  
pp. 7-18 ◽  
Author(s):  
HW Fennie ◽  
S Sponaugle ◽  
EA Daly ◽  
RD Brodeur
Keyword(s):  
Life History ◽  
Early Life ◽  
Life History Traits ◽  
Direct Evidence ◽  
Coho Salmon ◽  
Larval Fish ◽  
Early Life History ◽  
In The Wild ◽  
Otolith Microstructure Analysis ◽  
Pelagic Juvenile

Predation is a major source of mortality in the early life stages of fishes and a driving force in shaping fish populations. Theoretical, modeling, and laboratory studies have generated hypotheses that larval fish size, age, growth rate, and development rate affect their susceptibility to predation. Empirical data on predator selection in the wild are challenging to obtain, and most selective mortality studies must repeatedly sample populations of survivors to indirectly examine survivorship. While valuable on a population scale, these approaches can obscure selection by particular predators. In May 2018, along the coast of Washington, USA, we simultaneously collected juvenile quillback rockfish Sebastes maliger from both the environment and the stomachs of juvenile coho salmon Oncorhynchus kisutch. We used otolith microstructure analysis to examine whether juvenile coho salmon were age-, size-, and/or growth-selective predators of juvenile quillback rockfish. Our results indicate that juvenile rockfish consumed by salmon were significantly smaller, slower growing at capture, and younger than surviving (unconsumed) juvenile rockfish, providing direct evidence that juvenile coho salmon are selective predators on juvenile quillback rockfish. These differences in early life history traits between consumed and surviving rockfish are related to timing of parturition and the environmental conditions larval rockfish experienced, suggesting that maternal effects may substantially influence survival at this stage. Our results demonstrate that variability in timing of parturition and sea surface temperature leads to tradeoffs in early life history traits between growth in the larval stage and survival when encountering predators in the pelagic juvenile stage.

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