Protein Secondary Structure Prediction from Circular Dichroism Spectra Using a Self-Organizing Map with Concentration Correction

Vincent Hall; Meropi Sklepari; Alison Rodger

doi:10.1002/chir.22338

Protein Secondary Structure Prediction from Circular Dichroism Spectra Using a Self-Organizing Map with Concentration Correction

Chirality ◽

10.1002/chir.22338 ◽

2014 ◽

Vol 26 (9) ◽

pp. 471-482 ◽

Cited By ~ 11

Author(s):

Vincent Hall ◽

Meropi Sklepari ◽

Alison Rodger

Keyword(s):

Circular Dichroism ◽

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Self Organizing Map ◽

Circular Dichroism Spectra ◽

Protein Secondary Structure Prediction ◽

Circular Dichroïsm ◽

Self Organizing

Download Full-text

BeStSel: a web server for accurate protein secondary structure prediction and fold recognition from the circular dichroism spectra

Nucleic Acids Research ◽

10.1093/nar/gky497 ◽

2018 ◽

Vol 46 (W1) ◽

pp. W315-W322 ◽

Cited By ~ 212

Author(s):

András Micsonai ◽

Frank Wien ◽

Éva Bulyáki ◽

Judit Kun ◽

Éva Moussong ◽

...

Keyword(s):

Circular Dichroism ◽

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Web Server ◽

Fold Recognition ◽

Circular Dichroism Spectra ◽

Protein Secondary Structure Prediction ◽

Circular Dichroïsm

Download Full-text

Improvement of protein secondary structure prediction by combination of statistical algorithms and circular dichroism

Archives of Biochemistry and Biophysics ◽

10.1016/0003-9861(92)90143-k ◽

1992 ◽

Vol 294 (1) ◽

pp. 107-114 ◽

Cited By ~ 7

Author(s):

Enrico A. Carrara ◽

Cesare Gavotti ◽

Paolo Catasti ◽

Fabrizio Nozza ◽

Luisella L.Berutti Bergotto ◽

...

Keyword(s):

Circular Dichroism ◽

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction ◽

Statistical Algorithms ◽

Circular Dichroïsm

Download Full-text

Faculty Opinions recommendation of Protein secondary structure prediction using deep convolutional neural fields.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.726067888.793548469 ◽

2018 ◽

Author(s):

Patrice Koehl

Keyword(s):

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Neural Fields ◽

Protein Secondary Structure Prediction

Download Full-text

Identification and application of the concepts important for accurate and reliable protein secondary structure prediction

Protein Science ◽

10.1002/pro.5560051116 ◽

1996 ◽

Vol 5 (11) ◽

pp. 2298-2310 ◽

Cited By ~ 299

Author(s):

Ross D. King ◽

Michael J.E. Sternberg

Keyword(s):

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction

Download Full-text

Protein Secondary Structure Prediction Using Support Vector Machines (SVMs)

2013 International Conference on Machine Intelligence and Research Advancement ◽

10.1109/icmira.2013.124 ◽

2013 ◽

Author(s):

Hitesh Shah

Keyword(s):

Support Vector Machines ◽

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Support Vector ◽

Protein Secondary Structure Prediction ◽

Vector Machines

Download Full-text

Protein Secondary Structure Prediction using Bayesian Inference method on Decision fusion algorithms

2007 IEEE International Parallel and Distributed Processing Symposium ◽

10.1109/ipdps.2007.370430 ◽

2007 ◽

Cited By ~ 1

Author(s):

Somasheker Akkaladevi ◽

Ajay K Katangur

Keyword(s):

Bayesian Inference ◽

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Decision Fusion ◽

Inference Method ◽

Protein Secondary Structure Prediction ◽

Bayesian Inference Method

Download Full-text

Capturing hydrophobic moment using spectral coherence for protein secondary structure prediction

2013 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology (CIBCB) ◽

10.1109/cibcb.2013.6595403 ◽

2013 ◽

Author(s):

Pradeep Chowriappa ◽

Sumeet Dua

Keyword(s):

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Spectral Coherence ◽

Protein Secondary Structure Prediction ◽

Hydrophobic Moment

Download Full-text

A protein secondary structure prediction framework based on the Extreme Learning Machine

Neurocomputing ◽

10.1016/j.neucom.2008.01.016 ◽

2008 ◽

Vol 72 (1-3) ◽

pp. 262-268 ◽

Cited By ~ 95

Author(s):

Guoren Wang ◽

Yi Zhao ◽

Di Wang

Keyword(s):

Secondary Structure ◽

Extreme Learning Machine ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction ◽

Learning Machine

Download Full-text

Improving protein secondary structure prediction with aligned homologous sequences

Protein Science ◽

10.1002/pro.5560050113 ◽

1996 ◽

Vol 5 (1) ◽

pp. 106-113 ◽

Cited By ~ 41

Author(s):

V. Di Francesco ◽

J. Garnier ◽

P.J. Munson

Keyword(s):

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Protein Secondary Structure Prediction ◽

Homologous Sequences

Download Full-text

Protein secondary structure prediction using rule induction from coverings

2009 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology ◽

10.1109/cibcb.2009.4925711 ◽

2009 ◽

Author(s):

Leong Lee ◽

Jennifer L. Leopold ◽

Ronald L. Frank ◽

Anne M. Maglia

Keyword(s):

Secondary Structure ◽

Structure Prediction ◽

Secondary Structure Prediction ◽

Protein Secondary Structure ◽

Rule Induction ◽

Protein Secondary Structure Prediction

Download Full-text