The combined use of NMR, distance geometry, and restrained molecular dynamics for the conformational study of a cyclic somatostatin analogue

H. Pepermans; D. Tourwé; G. van Binst; R. Boelens; R. M. Scheek; W. F. van Gunsteren; R. Kaptein

doi:10.1002/bip.360270211

The combined use of NMR, distance geometry, and restrained molecular dynamics for the conformational study of a cyclic somatostatin analogue

Biopolymers ◽

10.1002/bip.360270211 ◽

1988 ◽

Vol 27 (2) ◽

pp. 323-338 ◽

Cited By ~ 30

Author(s):

H. Pepermans ◽

D. Tourwé ◽

G. van Binst ◽

R. Boelens ◽

R. M. Scheek ◽

...

Keyword(s):

Molecular Dynamics ◽

Distance Geometry ◽

Somatostatin Analogue ◽

Conformational Study ◽

Combined Use ◽

Restrained Molecular Dynamics

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The three-dimensional structure of α1-purothionin in solution: combined use of nuclear magnetic resonance, distance geometry and restrained molecular dynamics

The EMBO Journal ◽

10.1002/j.1460-2075.1986.tb04557.x ◽

1986 ◽

Vol 5 (10) ◽

pp. 2729-2735 ◽

Cited By ~ 186

Author(s):

G. Marius Clore ◽

Michael Nilges ◽

Dinesh K. Sukumaran ◽

Axel T. Brünger ◽

Martin Karplus ◽

...

Keyword(s):

Molecular Dynamics ◽

Nuclear Magnetic Resonance ◽

Magnetic Resonance ◽

Distance Geometry ◽

Three Dimensional ◽

Dimensional Structure ◽

Three Dimensional Structure ◽

Combined Use ◽

Restrained Molecular Dynamics ◽

Nuclear Magnetic

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Three-dimensional structure of phoratoxin in solution: combined use of nuclear magnetic resonance, distance geometry, and restrained molecular dynamics

Biochemistry ◽

10.1021/bi00380a037 ◽

1987 ◽

Vol 26 (6) ◽

pp. 1732-1745 ◽

Cited By ~ 58

Author(s):

G. Marius Clore ◽

Dinesh K. Sukumaran ◽

Michael Nilges ◽

Angela M. Gronenborn

Keyword(s):

Molecular Dynamics ◽

Nuclear Magnetic Resonance ◽

Magnetic Resonance ◽

Distance Geometry ◽

Three Dimensional ◽

Dimensional Structure ◽

Three Dimensional Structure ◽

Combined Use ◽

Restrained Molecular Dynamics ◽

Nuclear Magnetic

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A comparison of the restrained molecular dynamics and distance geometry methods for determining three-dimensional structures of proteins on the basis of interproton distances

FEBS Letters ◽

10.1016/0014-5793(87)81504-1 ◽

1987 ◽

Vol 213 (2) ◽

pp. 269-277 ◽

Cited By ~ 34

Author(s):

G.Marius Clore ◽

Michael Nilges ◽

Axel T. Brünger ◽

Martin Karplus ◽

Angela M. Gronenborn

Keyword(s):

Molecular Dynamics ◽

Distance Geometry ◽

Three Dimensional ◽

Interproton Distances ◽

Restrained Molecular Dynamics

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Solution conformations of human growth hormone releasing factor: comparison of the restrained molecular dynamics and distance geometry methods for a system without long-range distance data

Protein Engineering Design and Selection ◽

10.1093/protein/1.5.399 ◽

1987 ◽

Vol 1 (5) ◽

pp. 399-406 ◽

Cited By ~ 55

Author(s):

Axel T. Brünger ◽

G.Marius Clore ◽

Angela M. Gronenborn ◽

Martin Karplus

Keyword(s):

Molecular Dynamics ◽

Growth Hormone ◽

Long Range ◽

Human Growth Hormone ◽

Distance Geometry ◽

Human Growth ◽

Growth Hormone Releasing Factor ◽

Solution Conformations ◽

Distance Data ◽

Restrained Molecular Dynamics

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Solution Structure of a DNA Dodecamer Containing the Anti-Neoplastic Agent Arabinosylcytosine: Combined Use of NMR, Restrained Molecular Dynamics, and Full Relaxation Matrix Refinement

Biochemistry ◽

10.1021/bi00204a008 ◽

1994 ◽

Vol 33 (38) ◽

pp. 11460-11475 ◽

Cited By ~ 24

Author(s):

Barry I. Schweitzer ◽

Thomas Mikita ◽

Gregory W. Kellogg ◽

Kevin H. Gardner ◽

G. Peter Beardsley

Keyword(s):

Molecular Dynamics ◽

Solution Structure ◽

Relaxation Matrix ◽

Combined Use ◽

Full Relaxation ◽

Dna Dodecamer ◽

Relaxation Matrix Refinement ◽

Restrained Molecular Dynamics

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Refinement of the solution structure of the DNA dodecamer 5'd(CGCGPATTCGCG)2 containing a stable purine-thymine base pair: combined use of nuclear magnetic resonance and restrained molecular dynamics

Biochemistry ◽

10.1021/bi00411a042 ◽

1988 ◽

Vol 27 (11) ◽

pp. 4185-4197 ◽

Cited By ~ 32

Author(s):

G. Marius Clore ◽

Hartmut Oschkinat ◽

Larry W. McLaughlin ◽

Fritz Benseler ◽

Claudia Scalfi Happ ◽

...

Keyword(s):

Molecular Dynamics ◽

Nuclear Magnetic Resonance ◽

Magnetic Resonance ◽

Base Pair ◽

Solution Structure ◽

Combined Use ◽

Dna Dodecamer ◽

Restrained Molecular Dynamics ◽

Nuclear Magnetic

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The conformations of hirudin in solution: a study using nuclear magnetic resonance, distance geometry and restrained molecular dynamics

The EMBO Journal ◽

10.1002/j.1460-2075.1987.tb04785.x ◽

1987 ◽

Vol 6 (2) ◽

pp. 529-537 ◽

Cited By ~ 86

Author(s):

G. Marius Clore ◽

Dinesh K. Sukumaran ◽

Michael Nilges ◽

Jutta Zarbock ◽

Angela M. Gronenborn

Keyword(s):

Molecular Dynamics ◽

Nuclear Magnetic Resonance ◽

Magnetic Resonance ◽

Distance Geometry ◽

Restrained Molecular Dynamics ◽

Nuclear Magnetic

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Solution structure of human corticotropin releasing factor by 1H NMR and distance geometry with restrained molecular dynamics

Protein Engineering Design and Selection ◽

10.1093/protein/6.2.149 ◽

1993 ◽

Vol 6 (2) ◽

pp. 149-156 ◽

Cited By ~ 29

Author(s):

Christophe Romier ◽

Jean-Marie Bernassau ◽

Christian Cambillau ◽

Hervé Darbon

Keyword(s):

Molecular Dynamics ◽

1H Nmr ◽

Solution Structure ◽

Distance Geometry ◽

Corticotropin Releasing Factor ◽

Restrained Molecular Dynamics

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Refinement of the solution structure of the DNA decamer 5'd(CTGGATCCAG)2: combined use of nuclear magnetic resonance and restrained molecular dynamics

Biochemistry ◽

10.1021/bi00386a069 ◽

1987 ◽

Vol 26 (12) ◽

pp. 3734-3744 ◽

Cited By ~ 48

Author(s):

Michael Nilges ◽

G. Marius Clore ◽

Angela M. Gronenborn ◽

Norbert Piel ◽

Larry W. McLaughlin

Keyword(s):

Molecular Dynamics ◽

Nuclear Magnetic Resonance ◽

Magnetic Resonance ◽

Solution Structure ◽

Combined Use ◽

Restrained Molecular Dynamics ◽

Nuclear Magnetic

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Solution structure of human calcitonin gene-related peptide by proton NMR and distance geometry with restrained molecular dynamics

Biochemistry ◽

10.1021/bi00216a036 ◽

1991 ◽

Vol 30 (2) ◽

pp. 575-582 ◽

Cited By ~ 59

Author(s):

Alexander L. Breeze ◽

Timothy S. Harvey ◽

Renzo Bazzo ◽

Iain D. Campbell

Keyword(s):

Molecular Dynamics ◽

Solution Structure ◽

Distance Geometry ◽

Proton Nmr ◽

Calcitonin Gene Related Peptide ◽

Human Calcitonin ◽

Related Peptide ◽

Calcitonin Gene ◽

Restrained Molecular Dynamics

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