Stability of d ‐luciferin for bioluminescence to detect gene expression in freely moving mice for long durations

Luminescence ◽  
2020 ◽  
Author(s):  
Kanako Nakajima ◽  
Kazuko Hamada ◽  
Ryoga Ito ◽  
Yukina Yoshida ◽  
Kenneth Sutherland ◽  
...  
2019 ◽  
Vol 47 (18) ◽  
pp. e108-e108 ◽  
Author(s):  
Ewelina Lipiec ◽  
Francesco S Ruggeri ◽  
Carine Benadiba ◽  
Anna M Borkowska ◽  
Jan D Kobierski ◽  
...  

Abstract The integrity of the chromatin structure is essential to every process occurring within eukaryotic nuclei. However, there are no reliable tools to decipher the molecular composition of metaphase chromosomes. Here, we have applied infrared nanospectroscopy (AFM-IR) to demonstrate molecular difference between eu- and heterochromatin and generate infrared maps of single metaphase chromosomes revealing detailed information on their molecular composition, with nanometric lateral spatial resolution. AFM-IR coupled with principal component analysis has confirmed that chromosome areas containing euchromatin and heterochromatin are distinguishable based on differences in the degree of methylation. AFM-IR distribution of eu- and heterochromatin was compared to standard fluorescent staining. We demonstrate the ability of our methodology to locate spatially the presence of anticancer drug sites in metaphase chromosomes and cellular nuclei. We show that the anticancer 'rule breaker' platinum compound [Pt[N(p-HC6F4)CH2]2py2] preferentially binds to heterochromatin, forming localized discrete foci due to condensation of DNA interacting with the drug. Given the importance of DNA methylation in the development of nearly all types of cancer, there is potential for infrared nanospectroscopy to be used to detect gene expression/suppression sites in the whole genome and to become an early screening tool for malignancy.


2013 ◽  
Vol 27 (13) ◽  
pp. 1526-1536 ◽  
Author(s):  
C. Saini ◽  
A. Liani ◽  
T. Curie ◽  
P. Gos ◽  
F. Kreppel ◽  
...  

2021 ◽  
pp. 074873042110628
Author(s):  
Blanca Martin-Burgos ◽  
Wanqi Wang ◽  
Ivana William ◽  
Selma Tir ◽  
Innus Mohammad ◽  
...  

Circadian rhythms are driven by daily oscillations of gene expression. An important tool for studying cellular and tissue circadian rhythms is the use of a gene reporter, such as bioluminescence from the reporter gene luciferase controlled by a rhythmically expressed gene of interest. Here we describe methods that allow measurement of circadian bioluminescence from a freely moving mouse housed in a standard cage. Using a LumiCycle In Vivo (Actimetrics), we determined conditions that allow detection of circadian rhythms of bioluminescence from the PER2 reporter, PER2::LUC, in freely behaving mice. The LumiCycle In Vivo applies a background subtraction that corrects for effects of room temperature on photomultiplier tube (PMT) output. We tested delivery of d-luciferin via a subcutaneous minipump and in the drinking water. We demonstrate spikes in bioluminescence associated with drinking bouts. Further, we demonstrate that a synthetic luciferase substrate, CycLuc1, can support circadian rhythms of bioluminescence, even when delivered at a lower concentration than d-luciferin, and can support longer-term studies. A small difference in phase of the PER2::LUC bioluminescence rhythms, with females phase leading males, can be detected with this technique. We share our analysis scripts and suggestions for further improvements in this method. This approach will be straightforward to apply to mice with tissue-specific reporters, allowing insights into responses of specific peripheral clocks to perturbations such as environmental or pharmacological manipulations.


2020 ◽  
Vol 529 (4) ◽  
pp. 898-903 ◽  
Author(s):  
Kazuko Hamada ◽  
Akari Oota ◽  
Ryoga Ito ◽  
Shigeru Kasahara ◽  
Kanako Nakajima ◽  
...  

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