scholarly journals Quantifying the likelihood of structural models through a dynamically enhanced powder X‐ray diffraction protocol

2021 ◽  
Author(s):  
Sander Borgmans ◽  
Sven M.J. Rogge ◽  
Juul S. De Vos ◽  
Christian V. Stevens ◽  
Pascal Van Der Voort ◽  
...  
Keyword(s):  
Structural Models ◽  
X Ray Diffraction ◽  
X Ray

scholarly journals New Insights into the Crystal Chemistry of Elpidite, Na2Zr[Si6O15]·3H2O and (Na1+YCax□1−X−Y)Σ=2Zr[Si6O15]·(3−X)H2O, and Ab Initio Modeling of IR Spectra

Materials ◽  
2021 ◽  
Vol 14 (9) ◽  
pp. 2160
Author(s):  
Alexander Bogdanov ◽  
Ekaterina Kaneva ◽  
Roman Shendrik
Keyword(s):  
Ir Spectra ◽  
Structural Models ◽  
Chemical Characterization ◽  
Chemical Compositions ◽  
X Ray Diffraction ◽  
Special Group ◽  
X Ray ◽  
Influence Of Water ◽  
Radioactive Species

Elpidite belongs to a special group of microporous zirconosilicates, which are of great interest due to their capability to uptake various molecules and ions, e.g., some radioactive species, in their structural voids. The results of a combined electron probe microanalysis and single-crystal X-ray diffraction study of the crystals of elpidite from Burpala (Russia) and Khan-Bogdo (Mongolia) deposits are reported. Some differences in the chemical compositions are observed and substitution at several structural positions within the structure of the compounds are noted. Based on the obtained results, a detailed crystal–chemical characterization of the elpidites under study was carried out. Three different structure models of elpidite were simulated: Na2ZrSi6O15·3H2O (related to the structure of Russian elpidite), partly Ca-replaced Na1.5Ca0.25ZrSi6O15·2.75H2O (close to elpidite from Mongolia), and a hypothetical CaZrSi6O15·2H2O. The vibration spectra of the models were obtained and compared with the experimental one, taken from the literature. The strong influence of water molecule vibrations on the shape of IR spectra of studied structural models of elpidite is discussed in the paper.

The structure of oxide glasses studied by high-energy x-ray diffraction

2020 ◽  
Vol 61 (6) ◽  
pp. 233-238
Author(s):  
S. Kohara ◽  
◽  
N. Umesaki ◽  
H. Ohno ◽  
K. Suzuya ◽  
...  
Keyword(s):  
Neutron Diffraction ◽  
Structural Information ◽  
Structural Models ◽  
High Energy ◽  
Reverse Monte Carlo ◽  
Oxide Glasses ◽  
Neutron Diffraction Data ◽  
X Ray Diffraction ◽  
X Ray ◽  
Approaches To Study

The use of high‑energy x‑ray diffraction techniques with the latest generation synchrotron sources has created new approaches to study quantitatively the structure of noncrystalline materials. Recently, this technique has been combined with neutron diffraction at pulsed source to provide more detailed and reliable structural information not previously available. This article reviews and summarises recent results obtained from the high energy x‑ray diffraction on several oxide glasses, SiO2, B2O3 and PbSiO3, using bending magnet beamlines at SPring‑8. In particular, it addresses the structural models of the oxide glasses obtained by the reverse Monte Carlo (RMC) modelling technique using both the high energy x‑ray and neutron diffraction data.

scholarly journals On the crystal structure of the ordered vacancy compound Cu3In5Te9

2019 ◽  
Vol 65 (4 Jul-Aug) ◽  
pp. 360 ◽  
Author(s):  
G. E. Delgado ◽  
C. Rincón ◽  
G. Marroquin
Keyword(s):  
Crystal Structure ◽  
Diffraction Data ◽  
Rietveld Method ◽  
Structural Models ◽  
Unit Cell ◽  
X Ray Diffraction ◽  
Unit Cell Parameters ◽  
Space Group ◽  
X Ray ◽  
Cell Parameters

The crystal structure of the ordered vacancy compound (OVC) Cu3In5Te9 was analyzed using powder X-ray diffraction data. Several structural models were derived from the structure of the Cu-poor Cu-In-Se compound b-Cu0.39In1.2Se2 by permuting the cations in the available site positions. The refinement of the best model by the Rietveld method in the tetragonal space group P2c (Nº 112), with unit cell parameters a = 6.1852(2) Å, c = 12.3633(9) Å, V = 472.98(4) Å3, led to Rp = 7.1 %, Rwp = 8.5 %, Rexp = 6.4 %, S = 1.3 for 162 independent reflections. This model has the following Wyckoff site atomic distribution: Cu1 in 2e (0,0,0); In1 in 2f (½,½,0), In2 in 2d (0,½,¼); Cu2-In3 in 2b (½,0,¼); in 2a (0,0,¼); Te in 8n (x,y,z).

On the quality of the continuous rotation electron diffraction data for accurate atomic structure determination of inorganic compounds

2018 ◽  
Vol 51 (4) ◽  
pp. 1094-1101 ◽  
Author(s):  
Yunchen Wang ◽  
Taimin Yang ◽  
Hongyi Xu ◽  
Xiaodong Zou ◽  
Wei Wan
Keyword(s):  
Electron Diffraction ◽  
Single Crystal ◽  
Diffraction Data ◽  
Structural Models ◽  
Electron Diffraction Data ◽  
Data Sets ◽  
X Ray Diffraction ◽  
X Ray ◽  
Continuous Rotation

The continuous rotation electron diffraction (cRED) method has the capability of providing fast three-dimensional electron diffraction data collection on existing and future transmission electron microscopes; unknown structures could be potentially solved and refined using cRED data collected from nano- and submicrometre-sized crystals. However, structure refinements of cRED data using SHELXL often lead to relatively high R1 values when compared with those refined against single-crystal X-ray diffraction data. It is therefore necessary to analyse the quality of the structural models refined against cRED data. In this work, multiple cRED data sets collected from different crystals of an oxofluoride (FeSeO3F) and a zeolite (ZSM-5) with known structures are used to assess the data consistency and quality and, more importantly, the accuracy of the structural models refined against these data sets. An evaluation of the precision and consistency of the cRED data by examination of the statistics obtained from the data processing software DIALS is presented. It is shown that, despite the high R1 values caused by dynamical scattering and other factors, the refined atomic positions obtained from the cRED data collected for different crystals are consistent with those of the reference models refined against single-crystal X-ray diffraction data. The results serve as a reference for the quality of the cRED data and the achievable accuracy of the structural parameters.

PDF analysis of ferrihydrite and the violation of Pauling's Principia

Clay Minerals ◽  
2010 ◽  
Vol 45 (2) ◽  
pp. 225-228 ◽  
Author(s):  
A. Manceau
Keyword(s):  
Distribution Function ◽  
Neutron Diffraction ◽  
Regression Models ◽  
Pair Distribution Function ◽  
Structural Models ◽  
X Ray Diffraction ◽  
X Ray ◽  
Ferric Oxyhydroxide ◽  
Pdf Analysis ◽  
Crystal Electron

AbstractThe risk of overfitting pair distribution function (PDF) data for highly defective material (Farrow et al., 2007) is illuminated with the example of the nanocrystalline hydrous ferric oxyhydroxide, ferrihydrite. Two structural models have been published by Michel et al. (2007, 2010) using this method, both of which contradict the standard ‘ferrihydrits’ model established by X-ray diffraction (Drits et al., 1993), and confirmed by single-crystal electron nanodiffraction (Janney et al., 2001) and neutron diffraction (Jansen et al., 2002). Although PDF data are reproduced equally well with the two regression models, neither model is realistic: the first (fhyd6) violates Pauling's 2nd rule, and the second (ferrifh), Pauling's 3rd rule.

The structure of cubic MOF [{Ca(H2O)6}{CaGd(oxydiacetate)3}2].4H2O. A comparison between structural models obtained from Rietveld refinement of conventional and synchrotron X-ray powder diffraction data and standard refinement of single-crystal X-ray diffraction data

2012 ◽  
Vol 27 (4) ◽  
pp. 232-242 ◽  
Author(s):  
Leopoldo Suescun ◽  
Jun Wang ◽  
Ricardo Faccio ◽  
Guzmán Peinado ◽  
Julia Torres ◽  
...  
Keyword(s):  
Data Collection ◽  
Single Crystal ◽  
Powder Diffraction ◽  
Diffraction Data ◽  
Structural Models ◽  
Initial Time ◽  
High Symmetry ◽  
Powder Diffraction Data ◽  
X Ray Diffraction ◽  
X Ray

The structure of the metal–organic framework (MOF) compound [{Ca(H2O)6}{CaGd(oxydiacetate)3}2]·4H2O was determined by single-crystal X-ray diffraction and refined using conventional single-crystal X-ray diffraction data. In addition, the structure was refined using powder diffraction data collected from two sources, a conventional X-ray diffractometer in Bragg–Brentano geometry and a 12-detector high resolution synchrotron-based diffractometer in transmission geometry. Data from the latter were processed in three different ways to account for crystalline decay or radiation damage. One dataset was obtained by averaging the multiple detector patterns, another dataset was obtained by cutting the non-overlapping portions of each detector to consider only the first few minutes of data collection and a dose-corrected dataset was obtained by fitting the independent peaks in every dataset and extrapolating the intensity and peak position to the initial time of data collection or to zero-absorbed dose. The compared structural models obtained show that special processing of powder diffraction data produced a much accurate model, close to the single-crystal-based model for this particular compound with heavy atoms in high symmetry positions that do not contribute to a significant number of diffraction intensities.

scholarly journals A Comparison of Structural Models of Tb3Al5O12 and Nd3Al5O12 Glasses Obtained When Using X-ray Data Alone and When X-ray and Neutron Data are Combined

2016 ◽  
Vol 230 (3) ◽  
Author(s):  
Adrian Barnes
Keyword(s):  
Structural Models ◽  
X Ray Diffraction ◽  
Neutron Data ◽  
X Ray

AbstractX-ray diffraction experiments, including Anomalous X-ray Diffraction, have been carried out on Tb

scholarly journals Quantifying the likelihood of structural models through a dynamically enhanced powder X‐ray diffraction protocol

2021 ◽  
Author(s):  
Sander Borgmans ◽  
Sven M.J. Rogge ◽  
Juul S. De Vos ◽  
Christian V. Stevens ◽  
Pascal Van Der Voort ◽  
...  
Keyword(s):  
Structural Models ◽  
X Ray Diffraction ◽  
X Ray
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