Estimates of vertical turbulent mixing used to determine a vertical gradient in net and gross oxygen production in the oligotrophic South Pacific Gyre

2016 ◽  
Vol 43 (14) ◽  
pp. 7590-7599 ◽  
Author(s):  
W. Z. Haskell ◽  
M. G. Prokopenko ◽  
R. H. R. Stanley ◽  
A. N. Knapp
Keyword(s):  
Turbulent Mixing ◽  
South Pacific ◽  
Vertical Gradient ◽  
Oxygen Production ◽  
Vertical Turbulent Mixing ◽  
South Pacific Gyre

scholarly journals Carbonate system distribution, anthropogenic carbon and acidification in the western tropical South Pacific (OUTPACE 2015 transect)

2018 ◽  
Vol 15 (16) ◽  
pp. 5221-5236 ◽  
Author(s):  
Thibaut Wagener ◽  
Nicolas Metzl ◽  
Mathieu Caffin ◽  
Jonathan Fin ◽  
Sandra Helias Nunige ◽  
...  
Keyword(s):  
Inorganic Carbon ◽  
South Pacific ◽  
Total Alkalinity ◽  
Total Inorganic Carbon ◽  
Saturation State ◽  
Anthropogenic Carbon ◽  
Subsurface Waters ◽  
Derived Properties ◽  
Intermediate Waters ◽  
South Pacific Gyre

Abstract. The western tropical South Pacific was sampled along a longitudinal 4000 km transect (OUTPACE cruise, 18 February, 3 April 2015) for the measurement of carbonate parameters (total alkalinity and total inorganic carbon) between the Melanesian Archipelago (MA) and the western part of the South Pacific gyre (WGY). This paper reports this new dataset and derived properties: pH on the total scale (pHT) and the CaCO3 saturation state with respect to aragonite (Ωara). We also estimate anthropogenic carbon (CANT) distribution in the water column using the TrOCA method (Tracer combining Oxygen, inorganic Carbon and total Alkalinity). Along the OUTPACE transect a deeper penetration of CANT in the intermediate waters was observed in the MA, whereas highest CANT concentrations were detected in the subsurface waters of the WGY. By combining our OUTPACE dataset with data available in GLODAPv2 (1974–2009), temporal changes in oceanic inorganic carbon were evaluated. An increase of 1.3 to 1.6 µmol kg−1 a−1 for total inorganic carbon in the upper thermocline waters is estimated, whereas CANT increases by 1.1 to 1.2 µmol kg−1 a−1. In the MA intermediate waters (27 kg m−3 <σθ<27.2 kg m−3) an increase of 0.4 µmol kg−1 a−1 CANT is detected. Our results suggest a clear progression of ocean acidification in the western tropical South Pacific with a decrease in the oceanic pHT of up to −0.0027 a−1 and a shoaling of the saturation depth for aragonite of up to 200 m since the pre-industrial period.

scholarly journals Redefining the Subsurface Biosphere: Characterization of Fungi Isolated From Energy-Limited Marine Deep Subsurface Sediment

2021 ◽  
Vol 2 ◽  
Author(s):  
Brandi Kiel Reese ◽  
Morgan S. Sobol ◽  
Marshall Wayne Bowles ◽  
Kai-Uwe Hinrichs
Keyword(s):  
Organic Carbon ◽  
Growth Parameters ◽  
Carbon Sources ◽  
South Pacific ◽  
Physical Growth ◽  
Energy Budgets ◽  
Deep Subsurface ◽  
Fungal Populations ◽  
South Pacific Gyre

The characterization of metabolically active fungal isolates within the deep marine subsurface will alter current ecosystem models and living biomass estimates that are limited to bacterial and archaeal populations. Although marine fungi have been studied for over fifty years, a detailed description of fungal populations within the deep subsurface is lacking. Fungi possess metabolic pathways capable of utilizing previously considered non-bioavailable energy reserves. Therefore, metabolically active fungi would occupy a unique niche within subsurface ecosystems, with the potential to provide an organic carbon source for heterotrophic prokaryotic populations from the transformation of non-bioavailable energy into substrates, as well as from the fungal necromass itself. These organic carbon sources are not currently being considered in subsurface energy budgets. Sediments from South Pacific Gyre subsurface, one of the most energy-limited environments on Earth, were collected during the Integrated Ocean Drilling Program Expedition 329. Anoxic and oxic sediment slurry enrichments using fresh sediment were used to isolate multiple fungal strains in media types that varied in organic carbon substrates and concentration. Metabolically active and dormant fungal populations were also determined from nucleic acids extracted from in situ cryopreserved South Pacific Gyre sediments. For further characterization of physical growth parameters, two isolates were chosen based on their representation of the whole South Pacific Gyre fungal community. Results from this study show that fungi have adapted to be metabolically active and key community members in South Pacific Gyre sediments and potentially within global biogeochemical cycles.

scholarly journals Volume distribution for particles between 3.5 to 2000 μm in the upper 200 m region of the South Pacific Gyre

2008 ◽  
Vol 5 (2) ◽  
pp. 299-310 ◽  
Author(s):  
L. Stemmann ◽  
D. Eloire ◽  
A. Sciandra ◽  
G. A. Jackson ◽  
L. Guidi ◽  
...  
Keyword(s):  
Weight Ratio ◽  
South Pacific ◽  
Dry Weight ◽  
Volume Distribution ◽  
The South ◽  
Size Spectra ◽  
Marquesas Islands ◽  
Large Particles ◽  
Living Organisms ◽  
South Pacific Gyre

Abstract. The French JGOFS BIOSOPE cruise crossed the South Pacific Gyre (SPG) on a transect between the Marquesas Islands and the Chilean coast on a 7500 km transect (8° S–34° S and 8° W–72° W). The number and volume distributions of small (3.5100 μm) were analysed combining two instruments, the HIAC/Royco Counter (for the small particles) and the Underwater Video Profiler (UVP, for the large particles). For the HIAC analysis, samples were collected from 12 L CTD Rosette bottles and immediately analysed on board while the UVP provided an estimate of in situ particle concentrations and size in a continuous profile. Out of 76 continuous UVP and 117 discrete HIAC vertical profiles, 25 had both sets of measurements, mostly at a site close to the Marquesas Islands (site MAR) and one in the center of the gyre (site GYR). At GYR, the particle number spectra from few μm to few mm were fit with power relationships having slopes close to −4. At MAR, the high abundance of large objects, probably living organisms, created a shift in the full size spectra of particles such that a single slope was not appropriate. The small particle pool at both sites showed a diel pattern while the large did not, implying that the movement of mass toward the large particles does not take place at daily scale in the SPG area. Despite the relatively simple nature of the number spectra, the volume spectra were more variable because what were small deviations from the straight line in a log-log plot were large variations in the volume estimates. In addition, the mass estimates from the size spectra are very sensitive to crucial parameters such as the fractal dimension and the POC/Dry Weight ratio. Using consistent values for these parameters, we show that the volume of large particles can equal the volume of the smaller particles. However the proportion of material in large particles decreased from the mesotrophic conditions at the border of the SPG to the ultra-oligotrophy of the center in the upper 200 m depth. We expect large particles to play a major role in the trophic interaction in the upper waters of the South Pacific Gyre.

scholarly journals Role of eyewall and rainband eddy forcing in tropical cyclone intensification

2019 ◽  
Vol 19 (22) ◽  
pp. 14289-14310 ◽  
Author(s):  
Ping Zhu ◽  
Bryce Tyner ◽  
Jun A. Zhang ◽  
Eric Aligo ◽  
Sundararaman Gopalakrishnan ◽  
...  
Keyword(s):  
Tropical Cyclone ◽  
Turbulent Mixing ◽  
Inner Core ◽  
Weather Research And Forecasting ◽  
Rapid Changes ◽  
Flow Feature ◽  
Secondary Circulations ◽  
Vertical Turbulent Mixing ◽  
Operational Models

Abstract. While turbulence is commonly regarded as a flow feature pertaining to the planetary boundary layer (PBL), intense turbulent mixing generated by cloud processes also exists above the PBL in the eyewall and rainbands of a tropical cyclone (TC). The in-cloud turbulence above the PBL is intimately involved in the development of convective elements in the eyewall and rainbands and consists of a part of asymmetric eddy forcing for the evolution of the primary and secondary circulations of a TC. In this study, we show that the Hurricane Weather Research and Forecasting (HWRF) model, one of the operational models used for TC prediction, is unable to generate appropriate sub-grid-scale (SGS) eddy forcing above the PBL due to a lack of consideration of intense turbulent mixing generated by the eyewall and rainband clouds. Incorporating an in-cloud turbulent-mixing parameterization in the vertical turbulent-mixing scheme notably improves the HWRF model's skills in predicting rapid changes in intensity for several past major hurricanes. While the analyses show that the SGS eddy forcing above the PBL is only about one-fifth of the model-resolved eddy forcing, the simulated TC vortex inner-core structure, secondary overturning circulation, and the model-resolved eddy forcing exhibit a substantial dependence on the parameterized SGS eddy processes. The results highlight the importance of eyewall and rainband SGS eddy forcing to numerical prediction of TC intensification, including rapid intensification at the current resolution of operational models.

scholarly journals Attributing differences in the fate of lateral boundary ozone in AQMEII3 models to physical process representations

2018 ◽  
Vol 18 (23) ◽  
pp. 17157-17175
Author(s):  
Peng Liu ◽  
Christian Hogrefe ◽  
Ulas Im ◽  
Jesper H. Christensen ◽  
Johannes Bieser ◽  
...  
Keyword(s):  
Turbulent Mixing ◽  
Dry Deposition ◽  
Gulf Coast ◽  
Vertical Mixing ◽  
Primary Role ◽  
Southeastern Us ◽  
The Us ◽  
Vertical Grid ◽  
Vertical Turbulent Mixing ◽  
The Impact

Abstract. Increasing emphasis has been placed on characterizing the contributions and the uncertainties of ozone imported from outside the US. In chemical transport models (CTMs), the ozone transported through lateral boundaries (referred to as LB ozone hereafter) undergoes a series of physical and chemical processes in CTMs, which are important sources of the uncertainty in estimating the impact of LB ozone on ozone levels at the surface. By implementing inert tracers for LB ozone, the study seeks to better understand how differing representations of physical processes in regional CTMs may lead to differences in the simulated LB ozone that eventually reaches the surface across the US. For all the simulations in this study (including WRF∕CMAQ, WRF∕CAMx, COSMO-CLM∕CMAQ, and WRF∕DEHM), three chemically inert tracers that generally represent the altitude ranges of the planetary boundary layer (BC1), free troposphere (BC2), and upper troposphere–lower stratosphere (BC3) are tracked to assess the simulated impact of LB specification. Comparing WRF∕CAMx with WRF∕CMAQ, their differences in vertical grid structure explain 10 %–60 % of their seasonally averaged differences in inert tracers at the surface. Vertical turbulent mixing is the primary contributor to the remaining differences in inert tracers across the US in all seasons. Stronger vertical mixing in WRF∕CAMx brings more BC2 downward, leading to higher BCT (BCT=BC1+BC2+BC3) and BC2∕BCT at the surface in WRF∕CAMx. Meanwhile, the differences in inert tracers due to vertical mixing are partially counteracted by their difference in sub-grid cloud mixing over the southeastern US and the Gulf Coast region during summer. The process of dry deposition adds extra gradients to the spatial distribution of the differences in DM8A BCT by 5–10 ppb during winter and summer. COSMO-CLM∕CMAQ and WRF∕CMAQ show similar performance in inert tracers both at the surface and aloft through most seasons, which suggests similarity between the two models at process level. The largest difference is found in summer. Sub-grid cloud mixing plays a primary role in their differences in inert tracers over the southeastern US and the oceans in summer. Our analysis of the vertical profiles of inert tracers also suggests that the model differences in dry deposition over certain regions are offset by the model differences in vertical turbulent mixing, leading to small differences in inert tracers at the surface in these regions.

scholarly journals Microbial community composition and nitrogen availability influence DOC remineralization in the South Pacific Gyre

2015 ◽  
Vol 177 ◽  
pp. 325-334 ◽  
Author(s):  
Robert T. Letscher ◽  
Angela N. Knapp ◽  
Anna K. James ◽  
Craig A. Carlson ◽  
Alyson E. Santoro ◽  
...  
Keyword(s):  
Microbial Community ◽  
Community Composition ◽  
Nitrogen Availability ◽  
Microbial Community Composition ◽  
South Pacific ◽  
The South ◽  
South Pacific Gyre

scholarly journals Iron mineral structure, reactivity, and isotopic composition in a South Pacific Gyre ferromanganese nodule over 4 Ma

2015 ◽  
Vol 171 ◽  
pp. 61-79 ◽  
Author(s):  
Matthew A. Marcus ◽  
Katrina J. Edwards ◽  
Bleuenn Gueguen ◽  
Sirine C. Fakra ◽  
Gregory Horn ◽  
...  
Keyword(s):  
Isotopic Composition ◽  
South Pacific ◽  
Ferromanganese Nodule ◽  
Iron Mineral ◽  
Mineral Structure ◽  
South Pacific Gyre
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